RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 SERPINA2P20848 420 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 PPP1CCP36873 323 aaKnown RBP8.02□□□□□ -1.13
HPS4-217ENST00000496385 KLF3P57682 345 aaPredicted RBP8.02□□□□□ -1.13
HPS4-217ENST00000496385 CSNK1G2P78368 415 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 FAM189A2Q15884 450 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 KCNMB1Q16558 191 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 AADACL3Q5VUY0 350 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 LEMD1Q68G75 181 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 ASPHD2Q6ICH7 369 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 ARMC6Q6NXE6 501 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 SMIM15Q7Z3B0 74 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 LYPD6Q86Y78 171 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 FAM185AQ8N0U4 392 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 LRRC25Q8N386 305 aaPredicted RBP8.02□□□□□ -1.13
HPS4-217ENST00000496385 GVQW1Q8N7I0 195 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 FNDC9Q8TBE3 224 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 RARRES2Q99969 163 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 MIEN1Q9BRT3 115 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 TPSD1Q9BZJ3 242 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 PARP12Q9H0J9 701 aaKnown RBP8.02□□□□□ -1.13
HPS4-217ENST00000496385 ZMAT3Q9HA38 289 aaKnown RBP8.02□□□□□ -1.13
HPS4-217ENST00000496385 A0A087WV62 115 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 CENPVL1A0A0U1RR11 272 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 A0A1B0GU03 582 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 H0YL77 283 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 GEMIN2O14893 280 aaKnown RBP8.02□□□□□ -1.13
HPS4-217ENST00000496385 PLRG1O43660 514 aaKnown RBP8.02□□□□□ -1.13
HPS4-217ENST00000496385 CBR3O75828 277 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 BPNT1O95861 308 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 OR4A8P0C604 315 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 GIMD1P0DJR0 217 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 RBMXP38159 391 aaKnown RBP8.02□□□□□ -1.13
HPS4-217ENST00000496385 TNFRSF4P43489 277 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 SELENOTP62341 195 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 C1orf189Q5VU69 101 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 SSX7Q7RTT5 188 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 TMEM104Q8NE00 496 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 OR1N1Q8NGS0 311 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 FAM213BQ8TBF2 198 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 GRHL3Q8TE85 626 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 HIST1H2AAQ96QV6 131 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 OR8B4Q96RC9 309 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 IMMP2LQ96T52 175 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 ZNF2Q9BSG1 426 aaPredicted RBP8.02□□□□□ -1.13
HPS4-217ENST00000496385 ULBP3Q9BZM4 244 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 ZNF346Q9UL40 294 aaKnown RBP8.02□□□□□ -1.13
HPS4-217ENST00000496385 MUC6Q6W4X9 2439 aa8.02□□□□□ -1.13
HPS4-217ENST00000496385 ZNF318Q5VUA4 2279 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 A0A1B0GTH9 108 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 XKRY2A2RUG3 117 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 XKRYO14609 159 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 HNF1AP20823 631 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 NTSR1P30989 418 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 PTGER1P34995 402 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 CDKN2AP42771 156 aaKnown RBP8.01□□□□□ -1.13
HPS4-217ENST00000496385 METAP1P53582 386 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 BTG2P78543 158 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 IL13RA2Q14627 380 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 SLC17A1Q14916 467 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 ACOT6Q3I5F7 207 aaPredicted RBP8.01□□□□□ -1.13
HPS4-217ENST00000496385 DPPA3Q6W0C5 159 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 FBXW12Q6X9E4 464 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 ZNF550Q7Z398 422 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 NUFIP2Q7Z417 695 aaKnown RBP8.01□□□□□ -1.13
HPS4-217ENST00000496385 CATSPERDQ86XM0 798 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 RAB42Q8N4Z0 105 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 FAM160A2Q8N612 972 aaPredicted RBP8.01□□□□□ -1.13
HPS4-217ENST00000496385 CDRT4Q8N9R6 151 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 CHST4Q8NCG5 386 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 ZPLD1Q8TCW7 415 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 LIPHQ8WWY8 451 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 RLN3Q8WXF3 142 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 ERGIC1Q969X5 290 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 CLDN23Q96B33 292 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 CABLES2Q9BTV7 478 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 AICDAQ9GZX7 198 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 P4HTMQ9NXG6 502 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 FKBP11Q9NYL4 201 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 CACNA1HO95180 2353 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 A0A0G2JN53 185 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 FAM230AA0A1W2PPH8 454 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 WIPF3A6NGB9 483 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 ERI3O43414 337 aaKnown RBP8.01□□□□□ -1.13
HPS4-217ENST00000496385 TCF21O43680 179 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 TMEM225BP0DP42 221 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 RAC2P15153 192 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 TLX1P31314 330 aaPredicted RBP8.01□□□□□ -1.13
HPS4-217ENST00000496385 RPL29P47914 159 aaKnown RBP8.01□□□□□ -1.13
HPS4-217ENST00000496385 FHITP49789 147 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 MFGE8Q08431 387 aaPredicted RBP8.01□□□□□ -1.13
HPS4-217ENST00000496385 FOXF1Q12946 379 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 SGCGQ13326 291 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 ICAM4Q14773 271 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 C4orf17Q53FE4 359 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 SPSB3Q6PJ21 355 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 TMEM170AQ8WVE7 144 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 RASD2Q96D21 266 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 SLC25A44Q96H78 314 aaPredicted RBP8.01□□□□□ -1.13
HPS4-217ENST00000496385 DIRC2Q96SL1 478 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 FAAP24Q9BTP7 215 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms