RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 CD74P04233 296 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 FCER2P06734 321 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 CELA3AP09093 270 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 SULT1A3P0DMM9 295 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 SULT1A4P0DMN0 295 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 MGMTP16455 207 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 AMY2BP19961 511 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 OR3A3P47888 321 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 OR3A2P47893 321 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 MTCP1P56278 107 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 UBE2NP61088 152 aaKnown RBP6.03□□□□□ -1.44
USP39-219ENST00000496047 RPS27AP62979 156 aaKnown RBP6.03□□□□□ -1.44
USP39-219ENST00000496047 FGL1Q08830 312 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 UNC119Q13432 240 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 TGIF1Q15583 401 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 TBC1D28Q2M2D7 210 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 EIF2S3LQ2VIR3 472 aaKnown RBP6.03□□□□□ -1.44
USP39-219ENST00000496047 SNAI3Q3KNW1 292 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 LPCAT3Q6P1A2 487 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 IDO2Q6ZQW0 420 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 ZNF767PQ75MW2 155 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 PEG10Q86TG7 708 aaKnown RBP6.03□□□□□ -1.44
USP39-219ENST00000496047 LYPD6Q86Y78 171 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 SKA3Q8IX90 412 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 ARRDC1Q8N5I2 433 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 OR51S1Q8NGJ8 323 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 OR5H2Q8NGV7 314 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 NPRL2Q8WTW4 380 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 PIGTQ969N2 578 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 MRPS24Q96EL2 167 aaKnown RBP6.03□□□□□ -1.44
USP39-219ENST00000496047 LYZL4Q96KX0 146 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 TM2D1Q9BX74 207 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 C1QTNF5Q9BXJ0 243 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 SELENOIQ9C0D9 397 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 ZNF436Q9C0F3 470 aaPredicted RBP6.03□□□□□ -1.44
USP39-219ENST00000496047 ALX4Q9H161 411 aaPredicted RBP6.03□□□□□ -1.44
USP39-219ENST00000496047 LPAR5Q9H1C0 372 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 DEFB127Q9H1M4 99 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 ZNF552Q9H707 407 aaPredicted RBP6.03□□□□□ -1.44
USP39-219ENST00000496047 ZDHHC11Q9H8X9 412 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.03□□□□□ -1.44
USP39-219ENST00000496047 GPR173Q9NS66 373 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 SLC7A10Q9NS82 523 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 MYEF2Q9P2K5 600 aaKnown RBP6.03□□□□□ -1.44
USP39-219ENST00000496047 POU2F3Q9UKI9 436 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 EDARQ9UNE0 448 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 NOP16Q9Y3C1 178 aaKnown RBP6.03□□□□□ -1.44
USP39-219ENST00000496047 ZNF462Q96JM2 2506 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 CEP295Q9C0D2 2601 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 INTS1Q8N201 2190 aaKnown RBP6.03□□□□□ -1.44
USP39-219ENST00000496047 ZZEF1O43149 2961 aa6.03□□□□□ -1.44
USP39-219ENST00000496047 hCG_38984A0A1B0GV85 526 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 ANKRD30BLA7E2S9 258 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 PRSS44E7EML9 344 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 F5H5P2 479 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 FABP7O15540 132 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 TPD52L2O43399 206 aaKnown RBP6.02□□□□□ -1.45
USP39-219ENST00000496047 SS18L1O75177 396 aaPredicted RBP6.02□□□□□ -1.45
USP39-219ENST00000496047 FBXO24O75426 580 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 RGS11O94810 467 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 HTR3BO95264 441 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 CNOT4O95628 575 aaKnown RBP6.02□□□□□ -1.45
USP39-219ENST00000496047 IGHV3-9P01782 118 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 IGHG3P01860 377 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 DBHP09172 617 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 MMP7P09237 267 aaPredicted RBP6.02□□□□□ -1.45
USP39-219ENST00000496047 PTHLHP12272 177 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 EPHA1P21709 976 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 CCNOP22674 350 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 S100A1P23297 94 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 MPZP25189 248 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 BLVRBP30043 206 aaPredicted RBP6.02□□□□□ -1.45
USP39-219ENST00000496047 AGTR1P30556 359 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 ARPC4P59998 168 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 UBE2MP61081 183 aaKnown RBP6.02□□□□□ -1.45
USP39-219ENST00000496047 TSPAN5P62079 268 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 QRFPP83859 136 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 PLA2G7Q13093 441 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 RTP5Q14D33 572 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 OR8B8Q15620 311 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 MPPED2Q15777 294 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 DEFB109BQ30KR1 87 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 KRTAP27-1Q3LI81 207 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 SFRP5Q5T4F7 317 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 ATP1A1-AS1Q5TC04 95 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 FBXW9Q5XUX1 488 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 OR10K2Q6IF99 312 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 FAAP20Q6NZ36 180 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 FAHD2BQ6P2I3 314 aaPredicted RBP6.02□□□□□ -1.45
USP39-219ENST00000496047 IGFL2Q6UWQ7 119 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 C1orf229Q6ZS94 237 aaPredicted RBP6.02□□□□□ -1.45
USP39-219ENST00000496047 MOB3CQ70IA8 216 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 NUFIP2Q7Z417 695 aaKnown RBP6.02□□□□□ -1.45
USP39-219ENST00000496047 TMED4Q7Z7H5 227 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 PXT1Q8NFP0 134 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 FDCSPQ8NFU4 85 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 OR1K1Q8NGR3 316 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 OR4K15Q8NH41 348 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 OR2AE1Q8NHA4 323 aa6.02□□□□□ -1.45
USP39-219ENST00000496047 PIGCQ92535 297 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms