RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 RHBDL1O75783 438 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 NRASP01111 189 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 IGLV3-1P01715 115 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 FCGR1AP12314 374 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 NDUFB7P17568 137 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 MDKP21741 143 aaPredicted RBP10.49□□□□□ -0.73
PTPRF-214ENST00000496043 EEF1B2P24534 225 aaKnown RBP10.49□□□□□ -0.73
PTPRF-214ENST00000496043 CXCR4P61073 352 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 GUCA2AQ02747 115 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 DGUOKQ16854 277 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 ZNF684Q5T5D7 378 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 C1orf146Q5VVC0 180 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 PLCXD3Q63HM9 321 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 METAP1DQ6UB28 335 aaPredicted RBP10.49□□□□□ -0.73
PTPRF-214ENST00000496043 GID4Q8IVV7 300 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 PDZD9Q8IXQ8 264 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 ELMOD2Q8IZ81 293 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 OR4F5Q8NH21 305 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 C8orf46Q8TAG6 207 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 AQP3Q92482 292 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 GAFA1Q96PS6 74 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 IL4I1Q96RQ9 567 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 TTTY10Q9BZA0 68 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 CHIAQ9BZP6 476 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 DPAGT1Q9H3H5 408 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 GTF2A1LQ9UNN4 478 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 R4GMQ9 66 aa10.49□□□□□ -0.73
PTPRF-214ENST00000496043 A0A0U1RQK1 487 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 M0R129 80 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 MAGEB4O15481 346 aaPredicted RBP10.48□□□□□ -0.73
PTPRF-214ENST00000496043 DHRS3O75911 302 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 TTRP02766 147 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 PSG2P11465 335 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 FAHP16930 419 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 EPHA2P29317 976 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 IER3P46695 156 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 CAV3P56539 151 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 RPL15P61313 204 aaKnown RBP10.48□□□□□ -0.73
PTPRF-214ENST00000496043 EGR3Q06889 387 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 BLMHQ13867 455 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 DMRTC1Q5HYR2 192 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 PRR31Q5SQ13 230 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 CLVS2Q5SYC1 327 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 BCL2L15Q5TBC7 163 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 HAGHLQ6PII5 290 aaPredicted RBP10.48□□□□□ -0.73
PTPRF-214ENST00000496043 ZNF573Q86YE8 665 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 PIP4P2Q8N4L2 257 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 LRTOMTQ8WZ04 291 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 DYRK2Q92630 601 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 GABARAPL1Q9H0R8 117 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 MOB1AQ9H8S9 216 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 ADGRL4Q9HBW9 690 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 C1RLQ9NZP8 487 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 WARS2Q9UGM6 360 aaKnown RBP10.48□□□□□ -0.73
PTPRF-214ENST00000496043 OR52A1Q9UKL2 312 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 SNX5Q9Y5X3 404 aa10.48□□□□□ -0.73
PTPRF-214ENST00000496043 IGKV1D-17A0A075B6S4 117 aa10.47□□□□□ -0.73
PTPRF-214ENST00000496043 A0A1W2PQ09 198 aa10.47□□□□□ -0.73
PTPRF-214ENST00000496043 M0R1W7 72 aa10.47□□□□□ -0.73
PTPRF-214ENST00000496043 DLGAP1O14490 977 aa10.47□□□□□ -0.73
PTPRF-214ENST00000496043 SRSF10O75494 262 aaKnown RBP10.47□□□□□ -0.73
PTPRF-214ENST00000496043 NDUFA7O95182 113 aa10.47□□□□□ -0.73
PTPRF-214ENST00000496043 KNG1P01042 644 aa10.47□□□□□ -0.73
PTPRF-214ENST00000496043 TFF1P04155 84 aa10.47□□□□□ -0.73
PTPRF-214ENST00000496043 SELLP14151 372 aa10.47□□□□□ -0.73
PTPRF-214ENST00000496043 RAG2P55895 527 aa10.47□□□□□ -0.73
PTPRF-214ENST00000496043 MFGE8Q08431 387 aaPredicted RBP10.47□□□□□ -0.73
PTPRF-214ENST00000496043 LDLRAD3Q86YD5 345 aa10.47□□□□□ -0.73
PTPRF-214ENST00000496043 Q8N7P7 452 aa10.47□□□□□ -0.73
PTPRF-214ENST00000496043 YIPF7Q8N8F6 280 aa10.47□□□□□ -0.73
PTPRF-214ENST00000496043 ZNRF1Q8ND25 227 aa10.47□□□□□ -0.73
PTPRF-214ENST00000496043 OR51G2Q8NGK0 314 aa10.47□□□□□ -0.73
PTPRF-214ENST00000496043 CENPNQ96H22 339 aaPredicted RBP10.47□□□□□ -0.73
PTPRF-214ENST00000496043 SIRT7Q9NRC8 400 aa10.47□□□□□ -0.73
PTPRF-214ENST00000496043 MRM2Q9UI43 246 aaKnown RBP10.47□□□□□ -0.73
PTPRF-214ENST00000496043 MAB21L2Q9Y586 359 aa10.47□□□□□ -0.73
PTPRF-214ENST00000496043 V9GYS6 101 aa10.47□□□□□ -0.73
PTPRF-214ENST00000496043 A0A1B0GTI1 187 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 RNASEK-C17orf49H0YIS7 233 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 NPFFO15130 113 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 CIB2O75838 187 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 RPP14O95059 124 aaKnown RBP10.46□□□□□ -0.73
PTPRF-214ENST00000496043 IGHV4-59P01825 116 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 KRT8P05787 483 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 FBP1P09467 338 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 OR2T7P0C7T2 308 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 HTR1FP30939 366 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 PRDX2P32119 198 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 ATP6V1E1P36543 226 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 HAAOP46952 286 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 UBE2E1P51965 193 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 CAPZA1P52907 286 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 OLFML2AQ68BL7 652 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 NCR3LG1Q68D85 454 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 TMEM42Q69YG0 159 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 ACP7Q6ZNF0 438 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 GDPGP1Q6ZNW5 385 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 C17orf107Q6ZR85 190 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 POC1AQ8NBT0 407 aa10.46□□□□□ -0.73
PTPRF-214ENST00000496043 TMEM185AQ8NFB2 350 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms