RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 UBE2V2Q15819 145 aa16.81■□□□□ 0.28
LMO4-204ENST00000495705 DMRTC1Q5HYR2 192 aa16.81■□□□□ 0.28
LMO4-204ENST00000495705 FAM201AQ5SY85 155 aa16.81■□□□□ 0.28
LMO4-204ENST00000495705 DMKNQ6E0U4 476 aaPredicted RBP16.81■□□□□ 0.28
LMO4-204ENST00000495705 PRSS48Q7RTY5 328 aa16.81■□□□□ 0.28
LMO4-204ENST00000495705 LINC01356Q8N9X3 169 aa16.81■□□□□ 0.28
LMO4-204ENST00000495705 SGCDQ92629 289 aa16.81■□□□□ 0.28
LMO4-204ENST00000495705 MSI2Q96DH6 328 aaKnown RBP16.81■□□□□ 0.28
LMO4-204ENST00000495705 PATZ1Q9HBE1 687 aaKnown RBP16.81■□□□□ 0.28
LMO4-204ENST00000495705 ZNF281Q9Y2X9 895 aa16.81■□□□□ 0.28
LMO4-204ENST00000495705 MALRD1Q5VYJ5 2156 aa16.8■□□□□ 0.28
LMO4-204ENST00000495705 TRAV38-1A0A0B4J264 116 aa16.8■□□□□ 0.28
LMO4-204ENST00000495705 OOEPA6NGQ2 149 aa16.8■□□□□ 0.28
LMO4-204ENST00000495705 CD2P06729 351 aa16.8■□□□□ 0.28
LMO4-204ENST00000495705 CD80P33681 288 aa16.8■□□□□ 0.28
LMO4-204ENST00000495705 ACSM1Q08AH1 577 aa16.8■□□□□ 0.28
LMO4-204ENST00000495705 IRF3Q14653 427 aa16.8■□□□□ 0.28
LMO4-204ENST00000495705 HAGHLQ6PII5 290 aaPredicted RBP16.8■□□□□ 0.28
LMO4-204ENST00000495705 BOLLQ8N9W6 283 aaKnown RBP16.8■□□□□ 0.28
LMO4-204ENST00000495705 DNAAF1Q8NEP3 725 aa16.8■□□□□ 0.28
LMO4-204ENST00000495705 ZNF671Q8TAW3 534 aa16.8■□□□□ 0.28
LMO4-204ENST00000495705 BORCS8Q96FH0 119 aa16.8■□□□□ 0.28
LMO4-204ENST00000495705 TMEM246Q9BRR3 403 aa16.8■□□□□ 0.28
LMO4-204ENST00000495705 METTL17Q9H7H0 456 aaPredicted RBP16.8■□□□□ 0.28
LMO4-204ENST00000495705 NEK6Q9HC98 313 aa16.8■□□□□ 0.28
LMO4-204ENST00000495705 SIRT4Q9Y6E7 314 aaPredicted RBP16.8■□□□□ 0.28
LMO4-204ENST00000495705 CEACAM18A8MTB9 384 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 FAM157AC9JC47 383 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 MT-ND2P03891 347 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 CD1AP06126 327 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 PRKACBP22694 351 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 EEF1B2P24534 225 aaKnown RBP16.79■□□□□ 0.28
LMO4-204ENST00000495705 HAAOP46952 286 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 GABARAPL2P60520 117 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 SPHARQ15513 63 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 YIF1BQ5BJH7 314 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 TEX36Q5VZQ5 186 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 FAM166AQ6J272 317 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 DCDC5Q6ZRR9 648 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 SERPINA12Q8IW75 414 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 PARP16Q8N5Y8 322 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 ZFP41Q8N8Y5 198 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 TRMT10AQ8TBZ6 339 aaKnown RBP16.79■□□□□ 0.28
LMO4-204ENST00000495705 NPRL2Q8WTW4 380 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 AQP3Q92482 292 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 RGP1Q92546 391 aaPredicted RBP16.79■□□□□ 0.28
LMO4-204ENST00000495705 GHSRQ92847 366 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 SPSB1Q96BD6 273 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 CCDC90BQ9GZT6 254 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 MIOXQ9UGB7 285 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 POLDIP2Q9Y2S7 368 aa16.79■□□□□ 0.28
LMO4-204ENST00000495705 LSM2Q9Y333 95 aaKnown RBP16.79■□□□□ 0.28
LMO4-204ENST00000495705 FAM230AA0A1W2PPH8 454 aa16.78■□□□□ 0.28
LMO4-204ENST00000495705 F5H0A9 414 aaPredicted RBP16.78■□□□□ 0.28
LMO4-204ENST00000495705 C3orf80F5H4A9 247 aa16.78■□□□□ 0.28
LMO4-204ENST00000495705 J3QT63 122 aa16.78■□□□□ 0.28
LMO4-204ENST00000495705 NDUFA2O43678 99 aa16.78■□□□□ 0.28
LMO4-204ENST00000495705 PLPP2O43688 288 aa16.78■□□□□ 0.28
LMO4-204ENST00000495705 TGFAP01135 160 aa16.78■□□□□ 0.28
LMO4-204ENST00000495705 OCM2P0CE71 109 aa16.78■□□□□ 0.28
LMO4-204ENST00000495705 OCMP0CE72 109 aaPredicted RBP16.78■□□□□ 0.28
LMO4-204ENST00000495705 RPS2P15880 293 aaKnown RBP16.78■□□□□ 0.28
LMO4-204ENST00000495705 MUC1P15941 1255 aaPredicted RBP16.78■□□□□ 0.28
LMO4-204ENST00000495705 EGR1P18146 543 aa16.78■□□□□ 0.28
LMO4-204ENST00000495705 ATF1P18846 271 aa16.78■□□□□ 0.28
LMO4-204ENST00000495705 MICBQ29980 383 aa16.78■□□□□ 0.28
LMO4-204ENST00000495705 SFRP4Q6FHJ7 346 aaPredicted RBP16.78■□□□□ 0.28
LMO4-204ENST00000495705 NLRC3Q7RTR2 1065 aa16.78■□□□□ 0.28
LMO4-204ENST00000495705 DEFB108BQ8NET1 73 aa16.78■□□□□ 0.28
LMO4-204ENST00000495705 OR5D14Q8NGL3 314 aa16.78■□□□□ 0.28
LMO4-204ENST00000495705 OR13C9Q8NGT0 318 aa16.78■□□□□ 0.28
LMO4-204ENST00000495705 OR51F2Q8NH61 342 aa16.78■□□□□ 0.28
LMO4-204ENST00000495705 PGLYRP3Q96LB9 341 aa16.78■□□□□ 0.28
LMO4-204ENST00000495705 YTHDF1Q9BYJ9 559 aaKnown RBP16.78■□□□□ 0.28
LMO4-204ENST00000495705 ZCCHC4Q9H5U6 513 aa16.78■□□□□ 0.28
LMO4-204ENST00000495705 MRPS14O60783 128 aaKnown RBP16.77■□□□□ 0.28
LMO4-204ENST00000495705 ALX3O95076 343 aa16.77■□□□□ 0.28
LMO4-204ENST00000495705 MSMBP08118 114 aa16.77■□□□□ 0.28
LMO4-204ENST00000495705 CELP19835 753 aa16.77■□□□□ 0.28
LMO4-204ENST00000495705 MPZP25189 248 aa16.77■□□□□ 0.28
LMO4-204ENST00000495705 AZGP1P25311 298 aaKnown RBP16.77■□□□□ 0.28
LMO4-204ENST00000495705 RBP2P50120 134 aa16.77■□□□□ 0.28
LMO4-204ENST00000495705 ATP1B3P54709 279 aa16.77■□□□□ 0.28
LMO4-204ENST00000495705 MED22Q15528 200 aa16.77■□□□□ 0.28
LMO4-204ENST00000495705 LHFPL2Q6ZUX7 228 aa16.77■□□□□ 0.28
LMO4-204ENST00000495705 Q71RC1 249 aaPredicted RBP16.77■□□□□ 0.28
LMO4-204ENST00000495705 C19orf18Q8NEA5 215 aa16.77■□□□□ 0.28
LMO4-204ENST00000495705 OR8B3Q8NGG8 313 aa16.77■□□□□ 0.28
LMO4-204ENST00000495705 C12orf43Q96C57 262 aaKnown RBP16.77■□□□□ 0.28
LMO4-204ENST00000495705 NEIL1Q96FI4 390 aaPredicted RBP16.77■□□□□ 0.28
LMO4-204ENST00000495705 OPALINQ96PE5 141 aa16.77■□□□□ 0.28
LMO4-204ENST00000495705 OR5M11Q96RB7 305 aa16.77■□□□□ 0.28
LMO4-204ENST00000495705 OR8B2Q96RD0 313 aa16.77■□□□□ 0.28
LMO4-204ENST00000495705 PKIBQ9C010 78 aa16.77■□□□□ 0.28
LMO4-204ENST00000495705 YAE1D1Q9NRH1 226 aa16.77■□□□□ 0.28
LMO4-204ENST00000495705 KCNS2Q9ULS6 477 aa16.77■□□□□ 0.28
LMO4-204ENST00000495705 LRCH1Q9Y2L9 728 aa16.77■□□□□ 0.28
LMO4-204ENST00000495705 SONP18583 2426 aaKnown RBP16.76■□□□□ 0.27
LMO4-204ENST00000495705 IGKV1-9A0A0C4DH69 117 aa16.76■□□□□ 0.27
LMO4-204ENST00000495705 TRBV5-5A0A0J9YX44 114 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms