RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 CHST1O43916 411 aa11.86□□□□□ -0.51
PCCB-219ENST00000494742 FBXO24O75426 580 aa11.86□□□□□ -0.51
PCCB-219ENST00000494742 RHBDL1O75783 438 aa11.86□□□□□ -0.51
PCCB-219ENST00000494742 SOX14O95416 240 aa11.86□□□□□ -0.51
PCCB-219ENST00000494742 TFF1P04155 84 aa11.86□□□□□ -0.51
PCCB-219ENST00000494742 MAP2K3P46734 347 aa11.86□□□□□ -0.51
PCCB-219ENST00000494742 LGALS4P56470 323 aa11.86□□□□□ -0.51
PCCB-219ENST00000494742 PSMA6P60900 246 aaKnown RBP11.86□□□□□ -0.51
PCCB-219ENST00000494742 GK3PQ14409 553 aa11.86□□□□□ -0.51
PCCB-219ENST00000494742 CALHM1Q8IU99 346 aa11.86□□□□□ -0.51
PCCB-219ENST00000494742 ZNF561Q8N587 486 aa11.86□□□□□ -0.51
PCCB-219ENST00000494742 C11orf42Q8N5U0 333 aa11.86□□□□□ -0.51
PCCB-219ENST00000494742 OR5A2Q8NGI9 324 aa11.86□□□□□ -0.51
PCCB-219ENST00000494742 TEX47Q8TBZ9 253 aa11.86□□□□□ -0.51
PCCB-219ENST00000494742 PIFOQ8TCI5 191 aa11.86□□□□□ -0.51
PCCB-219ENST00000494742 LYZL4Q96KX0 146 aa11.86□□□□□ -0.51
PCCB-219ENST00000494742 ELAC2Q9BQ52 826 aaKnown RBP11.86□□□□□ -0.51
PCCB-219ENST00000494742 MAGIXQ9H6Y5 334 aa11.86□□□□□ -0.51
PCCB-219ENST00000494742 ELL3Q9HB65 397 aaPredicted RBP11.86□□□□□ -0.51
PCCB-219ENST00000494742 NDE1Q9NXR1 346 aa11.86□□□□□ -0.51
PCCB-219ENST00000494742 A0A0U1RQV5 110 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 MEGF11A6BM72 1044 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 FAM90A8PA6NJQ4 464 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 FAM183AA6NL82 134 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 ZNF732B4DXR9 585 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 MTRF1O75570 445 aaKnown RBP11.85□□□□□ -0.51
PCCB-219ENST00000494742 ATP6V1B1P15313 513 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 FAHP16930 419 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 RPL31P62899 125 aaKnown RBP11.85□□□□□ -0.51
PCCB-219ENST00000494742 OXLD1Q5BKU9 147 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 TMEM200BQ69YZ2 307 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 THAP5Q7Z6K1 395 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 OR8B12Q8NGG6 310 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 FAM81AQ8TBF8 368 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 THEM6Q8WUY1 208 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 AQP3Q92482 292 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 SGCDQ92629 289 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 YY1AP1Q9H869 796 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 REEP1Q9H902 201 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 MED20Q9H944 212 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 ZNF702PQ9H963 129 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 C19orf12Q9NSK7 152 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 SERTAD4Q9NUC0 356 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 USE1Q9NZ43 259 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 ACTR3BQ9P1U1 418 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 PITPNC1Q9UKF7 332 aa11.85□□□□□ -0.51
PCCB-219ENST00000494742 SLC1A7O00341 560 aa11.84□□□□□ -0.51
PCCB-219ENST00000494742 PRODHO43272 600 aa11.84□□□□□ -0.51
PCCB-219ENST00000494742 BMXP51813 675 aa11.84□□□□□ -0.51
PCCB-219ENST00000494742 CAPZA1P52907 286 aa11.84□□□□□ -0.51
PCCB-219ENST00000494742 ERVFRD-1P60508 538 aa11.84□□□□□ -0.51
PCCB-219ENST00000494742 SMIM21Q3B7S5 101 aa11.84□□□□□ -0.51
PCCB-219ENST00000494742 NSUN5P1Q3KNT7 163 aa11.84□□□□□ -0.51
PCCB-219ENST00000494742 ZBTB37Q5TC79 503 aa11.84□□□□□ -0.51
PCCB-219ENST00000494742 OR2T5Q6IEZ7 315 aa11.84□□□□□ -0.51
PCCB-219ENST00000494742 DEGS2Q6QHC5 323 aa11.84□□□□□ -0.51
PCCB-219ENST00000494742 C16orf89Q6UX73 402 aa11.84□□□□□ -0.51
PCCB-219ENST00000494742 ACP7Q6ZNF0 438 aa11.84□□□□□ -0.51
PCCB-219ENST00000494742 OR2T29Q8NH02 315 aa11.84□□□□□ -0.51
PCCB-219ENST00000494742 WIPF2Q8TF74 440 aaPredicted RBP11.84□□□□□ -0.51
PCCB-219ENST00000494742 OTULINQ96BN8 352 aa11.84□□□□□ -0.51
PCCB-219ENST00000494742 FAM107BQ9H098 131 aa11.84□□□□□ -0.51
PCCB-219ENST00000494742 TCF19Q9Y242 345 aa11.84□□□□□ -0.51
PCCB-219ENST00000494742 SAMHD1Q9Y3Z3 626 aaKnown RBP11.84□□□□□ -0.51
PCCB-219ENST00000494742 PRR23D1E9PI22 279 aaPredicted RBP11.83□□□□□ -0.52
PCCB-219ENST00000494742 NOS1APO75052 506 aaPredicted RBP11.83□□□□□ -0.52
PCCB-219ENST00000494742 PRR23D2P0DMB1 279 aaPredicted RBP11.83□□□□□ -0.52
PCCB-219ENST00000494742 CNN3Q15417 329 aaKnown RBP11.83□□□□□ -0.52
PCCB-219ENST00000494742 LCN1P1Q5VSP4 162 aa11.83□□□□□ -0.52
PCCB-219ENST00000494742 POC1AQ8NBT0 407 aa11.83□□□□□ -0.52
PCCB-219ENST00000494742 RPS4Y2Q8TD47 263 aa11.83□□□□□ -0.52
PCCB-219ENST00000494742 FOXRED1Q96CU9 486 aaPredicted RBP11.83□□□□□ -0.52
PCCB-219ENST00000494742 R3HDM4Q96D70 268 aa11.83□□□□□ -0.52
PCCB-219ENST00000494742 MALSU1Q96EH3 234 aa11.83□□□□□ -0.52
PCCB-219ENST00000494742 NKX3-1Q99801 234 aaPredicted RBP11.83□□□□□ -0.52
PCCB-219ENST00000494742 PRSS22Q9GZN4 317 aa11.83□□□□□ -0.52
PCCB-219ENST00000494742 MMP28Q9H239 520 aa11.83□□□□□ -0.52
PCCB-219ENST00000494742 OR51V1Q9H2C8 321 aa11.83□□□□□ -0.52
PCCB-219ENST00000494742 AURKAIP1Q9NWT8 199 aaPredicted RBP11.83□□□□□ -0.52
PCCB-219ENST00000494742 TAGLN3Q9UI15 199 aa11.83□□□□□ -0.52
PCCB-219ENST00000494742 TBL2Q9Y4P3 447 aaKnown RBP11.83□□□□□ -0.52
PCCB-219ENST00000494742 U3KQV3 271 aa11.83□□□□□ -0.52
PCCB-219ENST00000494742 ARRDC5A6NEK1 342 aa11.82□□□□□ -0.52
PCCB-219ENST00000494742 RFPL4AA6NLU0 287 aa11.82□□□□□ -0.52
PCCB-219ENST00000494742 RFPL4AL1F8VTS6 287 aa11.82□□□□□ -0.52
PCCB-219ENST00000494742 H3BN98 237 aa11.82□□□□□ -0.52
PCCB-219ENST00000494742 SELENOFO60613 162 aa11.82□□□□□ -0.52
PCCB-219ENST00000494742 RBP4P02753 201 aa11.82□□□□□ -0.52
PCCB-219ENST00000494742 CD28P10747 220 aa11.82□□□□□ -0.52
PCCB-219ENST00000494742 ALOX5APP20292 161 aa11.82□□□□□ -0.52
PCCB-219ENST00000494742 PRDX2P32119 198 aa11.82□□□□□ -0.52
PCCB-219ENST00000494742 RIPPLY1Q0D2K3 151 aa11.82□□□□□ -0.52
PCCB-219ENST00000494742 PPP1R8Q12972 351 aaKnown RBP11.82□□□□□ -0.52
PCCB-219ENST00000494742 CEP78Q5JTW2 689 aa11.82□□□□□ -0.52
PCCB-219ENST00000494742 SLC35D3Q5M8T2 416 aa11.82□□□□□ -0.52
PCCB-219ENST00000494742 KCTD18Q6PI47 426 aaPredicted RBP11.82□□□□□ -0.52
PCCB-219ENST00000494742 HAGHLQ6PII5 290 aaPredicted RBP11.82□□□□□ -0.52
PCCB-219ENST00000494742 CYP2R1Q6VVX0 501 aa11.82□□□□□ -0.52
PCCB-219ENST00000494742 TRPM8Q7Z2W7 1104 aa11.82□□□□□ -0.52
PCCB-219ENST00000494742 KRT77Q7Z794 578 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms