RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 HRASLS5Q96KN8 279 aa27.46■■□□□ 1.99
CBX4-203ENST00000494546 C1orf147Q96MC9 270 aaPredicted RBP27.46■■□□□ 1.99
CBX4-203ENST00000494546 GPR173Q9NS66 373 aa27.46■■□□□ 1.99
CBX4-203ENST00000494546 NLKQ9UBE8 527 aa27.46■■□□□ 1.99
CBX4-203ENST00000494546 MDFIC2A0A1B0GVS7 189 aa27.45■■□□□ 1.98
CBX4-203ENST00000494546 A6NIN4 97 aa27.45■■□□□ 1.98
CBX4-203ENST00000494546 SELLP14151 372 aa27.45■■□□□ 1.98
CBX4-203ENST00000494546 TGM4P49221 684 aa27.45■■□□□ 1.98
CBX4-203ENST00000494546 CLVS2Q5SYC1 327 aa27.45■■□□□ 1.98
CBX4-203ENST00000494546 OR14K1Q8NGZ2 314 aa27.45■■□□□ 1.98
CBX4-203ENST00000494546 AQP3Q92482 292 aa27.45■■□□□ 1.98
CBX4-203ENST00000494546 SIRPDQ9H106 197 aa27.45■■□□□ 1.98
CBX4-203ENST00000494546 CNTD2Q9H8S5 307 aa27.45■■□□□ 1.98
CBX4-203ENST00000494546 RUSC1-AS1Q66K80 236 aa27.44■■□□□ 1.98
CBX4-203ENST00000494546 CATSPERDQ86XM0 798 aa27.44■■□□□ 1.98
CBX4-203ENST00000494546 ANGPTL6Q8NI99 470 aa27.44■■□□□ 1.98
CBX4-203ENST00000494546 TMIGD2Q96BF3 282 aa27.44■■□□□ 1.98
CBX4-203ENST00000494546 DNTTIP1Q9H147 329 aa27.44■■□□□ 1.98
CBX4-203ENST00000494546 ZMAT3Q9HA38 289 aaKnown RBP27.44■■□□□ 1.98
CBX4-203ENST00000494546 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP27.44■■□□□ 1.985e-16■■■□□ 14.9
CBX4-203ENST00000494546 H3BSH0 61 aa27.43■■□□□ 1.98
CBX4-203ENST00000494546 ENTPD6O75354 484 aa27.43■■□□□ 1.98
CBX4-203ENST00000494546 SULT1C4O75897 302 aa27.43■■□□□ 1.98
CBX4-203ENST00000494546 BPIFB3P59826 476 aa27.43■■□□□ 1.98
CBX4-203ENST00000494546 ZNF788Q6ZQV5 615 aa27.43■■□□□ 1.98
CBX4-203ENST00000494546 H1FXQ92522 213 aaKnown RBP27.43■■□□□ 1.98
CBX4-203ENST00000494546 RORBQ92753 470 aa27.43■■□□□ 1.98
CBX4-203ENST00000494546 GAFA1Q96PS6 74 aa27.43■■□□□ 1.98
CBX4-203ENST00000494546 ONECUT1Q9UBC0 465 aa27.43■■□□□ 1.98
CBX4-203ENST00000494546 OR2AT4A6NND4 320 aa27.42■■□□□ 1.98
CBX4-203ENST00000494546 GABRA2P47869 451 aa27.42■■□□□ 1.98
CBX4-203ENST00000494546 COMPP49747 757 aaPredicted RBP27.42■■□□□ 1.98
CBX4-203ENST00000494546 IL13RA1P78552 427 aa27.42■■□□□ 1.98
CBX4-203ENST00000494546 DEFB112Q30KQ8 113 aa27.42■■□□□ 1.98
CBX4-203ENST00000494546 TMEM42Q69YG0 159 aa27.42■■□□□ 1.98
CBX4-203ENST00000494546 ZDHHC16Q969W1 377 aa27.42■■□□□ 1.98
CBX4-203ENST00000494546 MED30Q96HR3 178 aa27.42■■□□□ 1.98
CBX4-203ENST00000494546 GNG8Q9UK08 70 aa27.42■■□□□ 1.98
CBX4-203ENST00000494546 FBN3Q75N90 2809 aa27.41■■□□□ 1.98
CBX4-203ENST00000494546 CENPVL3A0A0U1RRI6 287 aa27.41■■□□□ 1.98
CBX4-203ENST00000494546 A0A1B0GVI7 797 aa27.41■■□□□ 1.98
CBX4-203ENST00000494546 DLGAP1O14490 977 aa27.41■■□□□ 1.98
CBX4-203ENST00000494546 GPR37O15354 613 aa27.41■■□□□ 1.98
CBX4-203ENST00000494546 ZNF85Q03923 595 aa27.41■■□□□ 1.98
CBX4-203ENST00000494546 PDCD1Q15116 288 aa27.41■■□□□ 1.98
CBX4-203ENST00000494546 SLC9A3R2Q15599 337 aa27.41■■□□□ 1.98
CBX4-203ENST00000494546 DGUOKQ16854 277 aa27.41■■□□□ 1.98
CBX4-203ENST00000494546 TP53I3Q53FA7 332 aa27.41■■□□□ 1.98
CBX4-203ENST00000494546 FAM220AQ7Z4H9 259 aa27.41■■□□□ 1.98
CBX4-203ENST00000494546 LY6G5BQ8NDX9 201 aa27.41■■□□□ 1.98
CBX4-203ENST00000494546 LHX4Q969G2 390 aa27.41■■□□□ 1.98
CBX4-203ENST00000494546 SLC25A28Q96A46 364 aa27.41■■□□□ 1.98
CBX4-203ENST00000494546 RNFT2Q96EX2 444 aa27.41■■□□□ 1.98
CBX4-203ENST00000494546 S100A14Q9HCY8 104 aa27.41■■□□□ 1.98
CBX4-203ENST00000494546 SLC25A10Q9UBX3 287 aaPredicted RBP27.41■■□□□ 1.98
CBX4-203ENST00000494546 DHRS7CA6NNS2 312 aa27.4■■□□□ 1.98
CBX4-203ENST00000494546 SYT7O43581 403 aa27.4■■□□□ 1.98
CBX4-203ENST00000494546 CCL1P22362 96 aa27.4■■□□□ 1.98
CBX4-203ENST00000494546 CFPP27918 469 aa27.4■■□□□ 1.98
CBX4-203ENST00000494546 HAAOP46952 286 aa27.4■■□□□ 1.98
CBX4-203ENST00000494546 SNRPGP62308 76 aaKnown RBP27.4■■□□□ 1.98
CBX4-203ENST00000494546 CDONQ4KMG0 1287 aa27.4■■□□□ 1.98
CBX4-203ENST00000494546 Q6ZSR3 168 aa27.4■■□□□ 1.98
CBX4-203ENST00000494546 ZNF573Q86YE8 665 aa27.4■■□□□ 1.98
CBX4-203ENST00000494546 MBOAT4Q96T53 435 aa27.4■■□□□ 1.98
CBX4-203ENST00000494546 DCTN5Q9BTE1 182 aa27.4■■□□□ 1.98
CBX4-203ENST00000494546 C9orf16Q9BUW7 83 aa27.4■■□□□ 1.98
CBX4-203ENST00000494546 ADI1Q9BV57 179 aa27.4■■□□□ 1.98
CBX4-203ENST00000494546 PLEKHA1Q9HB21 404 aa27.4■■□□□ 1.98
CBX4-203ENST00000494546 KPTNQ9Y664 436 aa27.4■■□□□ 1.98
CBX4-203ENST00000494546 SIGLEC5O15389 551 aa27.39■■□□□ 1.98
CBX4-203ENST00000494546 SYNGR1O43759 233 aa27.39■■□□□ 1.98
CBX4-203ENST00000494546 ACAA1P09110 424 aaPredicted RBP27.39■■□□□ 1.98
CBX4-203ENST00000494546 SLC25A30Q5SVS4 291 aa27.39■■□□□ 1.98
CBX4-203ENST00000494546 MEDAGQ5VYS4 303 aa27.39■■□□□ 1.98
CBX4-203ENST00000494546 C3orf56Q8N813 242 aa27.39■■□□□ 1.98
CBX4-203ENST00000494546 GATAD2BQ8WXI9 593 aa27.39■■□□□ 1.98
CBX4-203ENST00000494546 ZNF488Q96MN9 340 aa27.39■■□□□ 1.98
CBX4-203ENST00000494546 ACOXLQ9NUZ1 547 aa27.39■■□□□ 1.98
CBX4-203ENST00000494546 AASSQ9UDR5 926 aa27.39■■□□□ 1.98
CBX4-203ENST00000494546 GMPPBQ9Y5P6 360 aa27.39■■□□□ 1.98
CBX4-203ENST00000494546 IGKV1D-17A0A075B6S4 117 aa27.38■■□□□ 1.97
CBX4-203ENST00000494546 PQLC2LA1A4F0 135 aa27.38■■□□□ 1.97
CBX4-203ENST00000494546 J3QT63 122 aa27.38■■□□□ 1.97
CBX4-203ENST00000494546 RNASE1P07998 156 aaKnown RBP27.38■■□□□ 1.97
CBX4-203ENST00000494546 PSG2P11465 335 aa27.38■■□□□ 1.97
CBX4-203ENST00000494546 NDUFB7P17568 137 aa27.38■■□□□ 1.97
CBX4-203ENST00000494546 OCLNQ16625 522 aa27.38■■□□□ 1.97
CBX4-203ENST00000494546 VMO1Q7Z5L0 202 aa27.38■■□□□ 1.97
CBX4-203ENST00000494546 PDZD9Q8IXQ8 264 aa27.38■■□□□ 1.97
CBX4-203ENST00000494546 IGHV1-69DA0A0B4J2H0 117 aa27.37■■□□□ 1.97
CBX4-203ENST00000494546 ANKRD61A6NGH8 418 aa27.37■■□□□ 1.97
CBX4-203ENST00000494546 E9PQ18 207 aa27.37■■□□□ 1.97
CBX4-203ENST00000494546 CLDN34H7C241 214 aa27.37■■□□□ 1.97
CBX4-203ENST00000494546 HOXA3O43365 443 aaPredicted RBP27.37■■□□□ 1.97
CBX4-203ENST00000494546 IGHV1-69P01742 117 aa27.37■■□□□ 1.97
CBX4-203ENST00000494546 AWAT1Q58HT5 328 aa27.37■■□□□ 1.97
CBX4-203ENST00000494546 CMTM4Q8IZR5 234 aa27.37■■□□□ 1.97
CBX4-203ENST00000494546 PRSS35Q8N3Z0 413 aa27.37■■□□□ 1.97
CBX4-203ENST00000494546 POC1AQ8NBT0 407 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms