RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 CDKN2AP42771 156 aaKnown RBP17.11■□□□□ 0.33
COL27A1-207ENST00000494090 GPM6AP51674 278 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 PLA1AQ53H76 456 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 C17orf47Q8NEP4 570 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 PLA2G2FQ9BZM2 168 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 RYDENQ9NUL5 291 aaKnown RBP17.11■□□□□ 0.33
COL27A1-207ENST00000494090 CYB5R1Q9UHQ9 305 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 NEU3Q9UQ49 428 aa17.11■□□□□ 0.33
COL27A1-207ENST00000494090 CDC42EP2O14613 210 aa17.1■□□□□ 0.33
COL27A1-207ENST00000494090 SCO1O75880 301 aa17.1■□□□□ 0.33
COL27A1-207ENST00000494090 SLC25A6P12236 298 aa17.1■□□□□ 0.33
COL27A1-207ENST00000494090 SRD5A2P31213 254 aa17.1■□□□□ 0.33
COL27A1-207ENST00000494090 DHRS13Q6UX07 377 aa17.1■□□□□ 0.33
COL27A1-207ENST00000494090 DUSP18Q8NEJ0 188 aa17.1■□□□□ 0.33
COL27A1-207ENST00000494090 OR52N4Q8NGI2 321 aa17.1■□□□□ 0.33
COL27A1-207ENST00000494090 OR51I2Q9H344 312 aa17.1■□□□□ 0.33
COL27A1-207ENST00000494090 HES4Q9HCC6 221 aa17.1■□□□□ 0.33
COL27A1-207ENST00000494090 SCN1AP35498 2009 aa17.1■□□□□ 0.33
COL27A1-207ENST00000494090 HRASP01112 189 aa17.1■□□□□ 0.33
COL27A1-207ENST00000494090 PTHLHP12272 177 aa17.1■□□□□ 0.33
COL27A1-207ENST00000494090 RXFP4Q8TDU9 374 aa17.1■□□□□ 0.33
COL27A1-207ENST00000494090 GABRG3Q99928 467 aa17.1■□□□□ 0.33
COL27A1-207ENST00000494090 RHOFQ9HBH0 211 aa17.1■□□□□ 0.33
COL27A1-207ENST00000494090 KIAA0100Q14667 2235 aaKnown RBP17.1■□□□□ 0.33
COL27A1-207ENST00000494090 SPRY3O43610 288 aa17.1■□□□□ 0.33
COL27A1-207ENST00000494090 NPEPL1Q8NDH3 523 aa17.1■□□□□ 0.33
COL27A1-207ENST00000494090 GAR1Q9NY12 217 aaKnown RBP17.1■□□□□ 0.33
COL27A1-207ENST00000494090 MBTPS2O43462 519 aa17.1■□□□□ 0.33
COL27A1-207ENST00000494090 HIST1H1DP16402 221 aaKnown RBP17.1■□□□□ 0.33
COL27A1-207ENST00000494090 DRD3P35462 400 aa17.1■□□□□ 0.33
COL27A1-207ENST00000494090 COMMD1Q8N668 190 aa17.1■□□□□ 0.33
COL27A1-207ENST00000494090 OR10AD1Q8NGE0 317 aa17.1■□□□□ 0.33
COL27A1-207ENST00000494090 IGHV1OR15-9A0A0B4J2B8 117 aa17.09■□□□□ 0.33
COL27A1-207ENST00000494090 GP1BAP07359 652 aa17.09■□□□□ 0.33
COL27A1-207ENST00000494090 HOXB3P14651 431 aaPredicted RBP17.09■□□□□ 0.33
COL27A1-207ENST00000494090 PPP1CAP62136 330 aa17.09■□□□□ 0.33
COL27A1-207ENST00000494090 FMODQ06828 376 aa17.09■□□□□ 0.33
COL27A1-207ENST00000494090 C1orf210Q8IVY1 113 aa17.09■□□□□ 0.33
COL27A1-207ENST00000494090 ZNF561Q8N587 486 aa17.09■□□□□ 0.33
COL27A1-207ENST00000494090 RAB18Q9NP72 206 aa17.09■□□□□ 0.33
COL27A1-207ENST00000494090 MTCH2Q9Y6C9 303 aa17.09■□□□□ 0.33
COL27A1-207ENST00000494090 OR5M9Q8NGP3 310 aa17.09■□□□□ 0.33
COL27A1-207ENST00000494090 PRSS44E7EML9 344 aa17.09■□□□□ 0.33
COL27A1-207ENST00000494090 ZNF425Q6IV72 752 aa17.09■□□□□ 0.33
COL27A1-207ENST00000494090 TNFSF14O43557 240 aa17.09■□□□□ 0.33
COL27A1-207ENST00000494090 ACSM4P0C7M7 580 aa17.09■□□□□ 0.33
COL27A1-207ENST00000494090 MYF5P13349 255 aa17.09■□□□□ 0.33
COL27A1-207ENST00000494090 SPEM2Q0P670 501 aa17.09■□□□□ 0.33
COL27A1-207ENST00000494090 MOB3BQ86TA1 216 aa17.09■□□□□ 0.33
COL27A1-207ENST00000494090 MUC20Q8N307 709 aaPredicted RBP17.09■□□□□ 0.33
COL27A1-207ENST00000494090 CLDN23Q96B33 292 aa17.09■□□□□ 0.33
COL27A1-207ENST00000494090 SARGQ9BW04 601 aa17.09■□□□□ 0.33
COL27A1-207ENST00000494090 GLRX2Q9NS18 164 aa17.09■□□□□ 0.33
COL27A1-207ENST00000494090 IGHV5-51A0A0C4DH38 117 aa17.08■□□□□ 0.33
COL27A1-207ENST00000494090 SHISA8B8ZZ34 492 aa17.08■□□□□ 0.33
COL27A1-207ENST00000494090 RAB7AP51149 207 aa17.08■□□□□ 0.33
COL27A1-207ENST00000494090 CNN1P51911 297 aaKnown RBP17.08■□□□□ 0.33
COL27A1-207ENST00000494090 OR2Z1Q8NG97 314 aa17.08■□□□□ 0.33
COL27A1-207ENST00000494090 MOB3AQ96BX8 217 aa17.08■□□□□ 0.33
COL27A1-207ENST00000494090 ZNF707Q96C28 371 aaPredicted RBP17.08■□□□□ 0.33
COL27A1-207ENST00000494090 FAM122AQ96E09 287 aa17.08■□□□□ 0.33
COL27A1-207ENST00000494090 PLA2G3Q9NZ20 509 aa17.08■□□□□ 0.33
COL27A1-207ENST00000494090 DHRS3O75911 302 aa17.08■□□□□ 0.33
COL27A1-207ENST00000494090 KISS1Q15726 138 aa17.08■□□□□ 0.33
COL27A1-207ENST00000494090 DMKNQ6E0U4 476 aaPredicted RBP17.08■□□□□ 0.33
COL27A1-207ENST00000494090 TMEM108Q6UXF1 575 aa17.08■□□□□ 0.33
COL27A1-207ENST00000494090 NHLRC1Q6VVB1 395 aa17.08■□□□□ 0.33
COL27A1-207ENST00000494090 H0Y8G0 127 aa17.08■□□□□ 0.32
COL27A1-207ENST00000494090 MVDP53602 400 aa17.08■□□□□ 0.32
COL27A1-207ENST00000494090 HLXQ14774 488 aaPredicted RBP17.08■□□□□ 0.32
COL27A1-207ENST00000494090 RPUSD4Q96CM3 377 aaKnown RBP17.08■□□□□ 0.32
COL27A1-207ENST00000494090 SMIM7Q9BQ49 75 aa17.08■□□□□ 0.32
COL27A1-207ENST00000494090 CST4P01036 141 aa17.08■□□□□ 0.32
COL27A1-207ENST00000494090 OR2B8PP59922 312 aa17.08■□□□□ 0.32
COL27A1-207ENST00000494090 TAAR3PQ9P1P4 343 aa17.08■□□□□ 0.32
COL27A1-207ENST00000494090 AQP7P3A6NL99 342 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 CD96P40200 585 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 H3F3AP84243 136 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 DHRS2Q13268 280 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 DMRTC1Q5HYR2 192 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 SPATA46Q5T0L3 261 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 CLRN3Q8NCR9 226 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 CXorf58Q96LI9 332 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 CABLES2Q9BTV7 478 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 V9GYS6 101 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 SFT2D2O95562 160 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 GPANK1O95872 356 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 OR13D1Q8NGV5 346 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 TVP23CQ96ET8 276 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 ARHGAP5-AS1Q96IT6 56 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 ESRP2Q9H6T0 727 aaKnown RBP17.07■□□□□ 0.32
COL27A1-207ENST00000494090 ZNF835Q9Y2P0 537 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 ANKRD20A5PA0PJZ0 165 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 CT62P0C5K7 136 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 SLC25A30Q5SVS4 291 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 ETFRF1Q6IPR1 90 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 ZNF768Q9H5H4 540 aaKnown RBP17.07■□□□□ 0.32
COL27A1-207ENST00000494090 RNASEK-C17orf49H0YIS7 233 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 FFAR1O14842 300 aa17.07■□□□□ 0.32
COL27A1-207ENST00000494090 TMEM88Q6PEY1 159 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms