RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 CCDC71LQ8N9Z2 235 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 BPIFCQ8NFQ6 507 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 OR10Z1Q8NGY1 313 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 OR6C1Q96RD1 312 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 RASL10BQ96S79 203 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 SPSB2Q99619 263 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 PIGQQ9BRB3 760 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 METTL9Q9H1A3 318 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 SMDT1Q9H4I9 107 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 PARP11Q9NR21 331 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 ASF1BQ9NVP2 202 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 NECAP2Q9NVZ3 263 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 EHFQ9NZC4 300 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 IL36GQ9NZH8 169 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 ZNF230Q9UIE0 474 aaPredicted RBP10.1□□□□□ -0.79
RFC4-214ENST00000494047 TUBD1Q9UJT1 453 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 ZNF175Q9Y473 711 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 CEP295Q9C0D2 2601 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 CHD8Q9HCK8 2581 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 FER1L5A0AVI2 2057 aa10.1□□□□□ -0.79
RFC4-214ENST00000494047 BORCS7-ASMTA0A0B4J1R7 106 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 FAM90A10PA6NDY2 464 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 FAM90A18PA6NE21 464 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 FAM90A16PA6NEW6 464 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 FAM90A20PA6NIJ5 464 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 FAM90A8PA6NJQ4 464 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 FAM90A7PA6NKC0 464 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 FAM90A22PA8MWA6 464 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 FAM90A12PA8MX19 464 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 FAM90A5PA8MXJ8 464 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 FAM90A23PA8MXZ1 464 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 LINC01387J3KSC0 135 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 CCSO14618 274 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 SEC16AO15027 2179 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 KLK3P07288 261 aaPredicted RBP10.09□□□□□ -0.79
RFC4-214ENST00000494047 FAM90A15PP0C7V4 464 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 FAM90A13PP0C7W8 464 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 FAM90A14PP0C7W9 464 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 FAM90A24PP0C7X0 464 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 ACP1P24666 158 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 OR3A4PP47883 348 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 CAV2P51636 162 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 GPR157Q5UAW9 335 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 DHRS7BQ6IAN0 325 aaPredicted RBP10.09□□□□□ -0.79
RFC4-214ENST00000494047 MRPL14Q6P1L8 145 aaKnown RBP10.09□□□□□ -0.79
RFC4-214ENST00000494047 ZNF585AQ6P3V2 769 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 C17orf107Q6ZR85 190 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 TMPRSS7Q7RTY8 843 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 GPR137CQ8N3F9 429 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 LRTM2Q8N967 370 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 POC1AQ8NBT0 407 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 SLC38A9Q8NBW4 561 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 RELL2Q8NC24 303 aaPredicted RBP10.09□□□□□ -0.79
RFC4-214ENST00000494047 LFNGQ8NES3 379 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 OR10G3Q8NGC4 313 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 OR9K2Q8NGE7 335 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 GALNT14Q96FL9 552 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 ARHGAP5-AS1Q96IT6 56 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 ABHD14BQ96IU4 210 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 SEC22AQ96IW7 307 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 FAM71F1Q96KD3 344 aaPredicted RBP10.09□□□□□ -0.79
RFC4-214ENST00000494047 SGCZQ96LD1 299 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 ZNF75AQ96N20 296 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 NUDT22Q9BRQ3 303 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 EMC6Q9BV81 110 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 PECRQ9BY49 303 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 ANGPTL4Q9BY76 406 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 FAM212BQ9NTI7 297 aaPredicted RBP10.09□□□□□ -0.79
RFC4-214ENST00000494047 FBXO9Q9UK97 447 aaPredicted RBP10.09□□□□□ -0.79
RFC4-214ENST00000494047 PTPRBP23467 1997 aa10.09□□□□□ -0.79
RFC4-214ENST00000494047 WIPF3A6NGB9 483 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 E5RGE8 158 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 ATP6V1G2-DDX39BF2Z307 99 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 F8W036 122 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 M0R135 149 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 DNASE2O00115 360 aaPredicted RBP10.08□□□□□ -0.8
RFC4-214ENST00000494047 DHHO43323 396 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 NDUFA2O43678 99 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 OR2J2O76002 312 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 CST2P09228 141 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 ICAM2P13598 275 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 ABOP16442 354 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 PVALBP20472 110 aaPredicted RBP10.08□□□□□ -0.8
RFC4-214ENST00000494047 BLVRBP30043 206 aaPredicted RBP10.08□□□□□ -0.8
RFC4-214ENST00000494047 SULT1A2P50226 295 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 SSR4P51571 173 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 UCP3P55916 312 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 CLDN17P56750 224 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 RAC1P63000 192 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 FAM3AP98173 230 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 ATXN7L3Q14CW9 347 aaPredicted RBP10.08□□□□□ -0.8
RFC4-214ENST00000494047 RSU1Q15404 277 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 SRSF7Q16629 238 aaKnown RBP eCLIP10.08□□□□□ -0.82e-6■■■■□ 21.1
RFC4-214ENST00000494047 SWI5Q1ZZU3 235 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 SLC22A6Q4U2R8 563 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 PLAC9Q5JTB6 97 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 RIPPLY2Q5TAB7 128 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 FAM27BQ5VT28 67 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 TMEM200AQ86VY9 491 aa10.08□□□□□ -0.8
RFC4-214ENST00000494047 ADAD2Q8NCV1 583 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms