RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 FAM81AQ8TBF8 368 aa14.12□□□□□ -0.15
COL9A1-210ENST00000493682 SDSLQ96GA7 329 aa14.12□□□□□ -0.15
COL9A1-210ENST00000493682 CLPTM1LQ96KA5 538 aa14.12□□□□□ -0.15
COL9A1-210ENST00000493682 FEVQ99581 238 aa14.12□□□□□ -0.15
COL9A1-210ENST00000493682 RAB18Q9NP72 206 aa14.12□□□□□ -0.15
COL9A1-210ENST00000493682 MEGF11A6BM72 1044 aa14.11□□□□□ -0.15
COL9A1-210ENST00000493682 PRR23D1E9PI22 279 aaPredicted RBP14.11□□□□□ -0.15
COL9A1-210ENST00000493682 CHST1O43916 411 aa14.11□□□□□ -0.15
COL9A1-210ENST00000493682 PRR23D2P0DMB1 279 aaPredicted RBP14.11□□□□□ -0.15
COL9A1-210ENST00000493682 VSIG10L2P0DP72 767 aa14.11□□□□□ -0.15
COL9A1-210ENST00000493682 MAP2K3P46734 347 aa14.11□□□□□ -0.15
COL9A1-210ENST00000493682 FAM189A2Q15884 450 aa14.11□□□□□ -0.15
COL9A1-210ENST00000493682 DMRTC1Q5HYR2 192 aa14.11□□□□□ -0.15
COL9A1-210ENST00000493682 OR5K1Q8NHB7 308 aa14.11□□□□□ -0.15
COL9A1-210ENST00000493682 ZNF671Q8TAW3 534 aa14.11□□□□□ -0.15
COL9A1-210ENST00000493682 PIFOQ8TCI5 191 aa14.11□□□□□ -0.15
COL9A1-210ENST00000493682 NIPAL2Q9H841 368 aa14.11□□□□□ -0.15
COL9A1-210ENST00000493682 LRP12Q9Y561 859 aa14.11□□□□□ -0.15
COL9A1-210ENST00000493682 MTRF1O75570 445 aaKnown RBP14.1□□□□□ -0.15
COL9A1-210ENST00000493682 CAPZA1P52907 286 aa14.1□□□□□ -0.15
COL9A1-210ENST00000493682 FAM98BQ52LJ0 330 aaKnown RBP14.1□□□□□ -0.15
COL9A1-210ENST00000493682 LCN8Q6JVE9 175 aa14.1□□□□□ -0.15
COL9A1-210ENST00000493682 HAGHLQ6PII5 290 aaPredicted RBP14.1□□□□□ -0.15
COL9A1-210ENST00000493682 THAP5Q7Z6K1 395 aa14.1□□□□□ -0.15
COL9A1-210ENST00000493682 DHFR2Q86XF0 187 aa14.1□□□□□ -0.15
COL9A1-210ENST00000493682 C11orf42Q8N5U0 333 aa14.1□□□□□ -0.15
COL9A1-210ENST00000493682 OR5A2Q8NGI9 324 aa14.1□□□□□ -0.15
COL9A1-210ENST00000493682 GIPC3Q8TF64 312 aa14.1□□□□□ -0.15
COL9A1-210ENST00000493682 AQP3Q92482 292 aa14.1□□□□□ -0.15
COL9A1-210ENST00000493682 NPFFR1Q9GZQ6 430 aa14.1□□□□□ -0.15
COL9A1-210ENST00000493682 HEXA-AS1Q9H8Q6 139 aa14.1□□□□□ -0.15
COL9A1-210ENST00000493682 RASL12Q9NYN1 266 aa14.1□□□□□ -0.15
COL9A1-210ENST00000493682 ZNF281Q9Y2X9 895 aa14.1□□□□□ -0.15
COL9A1-210ENST00000493682 A0A0U1RQV5 110 aa14.09□□□□□ -0.15
COL9A1-210ENST00000493682 OR5B21A6NL26 309 aa14.09□□□□□ -0.15
COL9A1-210ENST00000493682 RFPL4AA6NLU0 287 aa14.09□□□□□ -0.15
COL9A1-210ENST00000493682 RFPL4AL1F8VTS6 287 aa14.09□□□□□ -0.15
COL9A1-210ENST00000493682 PRODHO43272 600 aa14.09□□□□□ -0.15
COL9A1-210ENST00000493682 ALOX5APP20292 161 aa14.09□□□□□ -0.15
COL9A1-210ENST00000493682 BMXP51813 675 aa14.09□□□□□ -0.15
COL9A1-210ENST00000493682 RPL31P62899 125 aaKnown RBP14.09□□□□□ -0.15
COL9A1-210ENST00000493682 GINS1Q14691 196 aa14.09□□□□□ -0.15
COL9A1-210ENST00000493682 TMEM200BQ69YZ2 307 aa14.09□□□□□ -0.15
COL9A1-210ENST00000493682 ACP7Q6ZNF0 438 aa14.09□□□□□ -0.15
COL9A1-210ENST00000493682 LIAT1Q6ZQX7 453 aa14.09□□□□□ -0.15
COL9A1-210ENST00000493682 TRPM8Q7Z2W7 1104 aa14.09□□□□□ -0.15
COL9A1-210ENST00000493682 REC114Q7Z4M0 266 aa14.09□□□□□ -0.15
COL9A1-210ENST00000493682 KRT77Q7Z794 578 aa14.09□□□□□ -0.15
COL9A1-210ENST00000493682 CPOQ8IVL8 374 aa14.09□□□□□ -0.15
COL9A1-210ENST00000493682 CD177Q8N6Q3 437 aa14.09□□□□□ -0.15
COL9A1-210ENST00000493682 MUC13Q9H3R2 512 aa14.09□□□□□ -0.15
COL9A1-210ENST00000493682 ARL2BPQ9Y2Y0 163 aa14.09□□□□□ -0.15
COL9A1-210ENST00000493682 PLXNB1O43157 2135 aa14.09□□□□□ -0.15
COL9A1-210ENST00000493682 ARRDC5A6NEK1 342 aa14.08□□□□□ -0.16
COL9A1-210ENST00000493682 ACOD1A6NK06 481 aa14.08□□□□□ -0.16
COL9A1-210ENST00000493682 PIN1P1O15428 100 aa14.08□□□□□ -0.16
COL9A1-210ENST00000493682 COX7A1P24310 79 aa14.08□□□□□ -0.16
COL9A1-210ENST00000493682 HCCSP53701 268 aa14.08□□□□□ -0.16
COL9A1-210ENST00000493682 ERVFRD-1P60508 538 aa14.08□□□□□ -0.16
COL9A1-210ENST00000493682 MS4A2Q01362 244 aa14.08□□□□□ -0.16
COL9A1-210ENST00000493682 GK3PQ14409 553 aa14.08□□□□□ -0.16
COL9A1-210ENST00000493682 MOB3CQ70IA8 216 aa14.08□□□□□ -0.16
COL9A1-210ENST00000493682 LYG1Q8N1E2 194 aa14.08□□□□□ -0.16
COL9A1-210ENST00000493682 DTX3Q8N9I9 347 aa14.08□□□□□ -0.16
COL9A1-210ENST00000493682 POC1AQ8NBT0 407 aa14.08□□□□□ -0.16
COL9A1-210ENST00000493682 BBS1Q8NFJ9 593 aa14.08□□□□□ -0.16
COL9A1-210ENST00000493682 OR4M1Q8NGD0 313 aa14.08□□□□□ -0.16
COL9A1-210ENST00000493682 PPP1R14AQ96A00 147 aa14.08□□□□□ -0.16
COL9A1-210ENST00000493682 ZNF488Q96MN9 340 aa14.08□□□□□ -0.16
COL9A1-210ENST00000493682 NKX3-1Q99801 234 aaPredicted RBP14.08□□□□□ -0.16
COL9A1-210ENST00000493682 FAM206AQ9NX38 181 aa14.08□□□□□ -0.16
COL9A1-210ENST00000493682 LAMP5Q9UJQ1 280 aa14.08□□□□□ -0.16
COL9A1-210ENST00000493682 TMEM269A0A1B0GVZ9 245 aa14.07□□□□□ -0.16
COL9A1-210ENST00000493682 A0A1W2PPH5 198 aa14.07□□□□□ -0.16
COL9A1-210ENST00000493682 PSMD9O00233 223 aa14.07□□□□□ -0.16
COL9A1-210ENST00000493682 HMGN1P05114 100 aa14.07□□□□□ -0.16
COL9A1-210ENST00000493682 ATP6V1B1P15313 513 aa14.07□□□□□ -0.16
COL9A1-210ENST00000493682 CCL3L1P16619 93 aa14.07□□□□□ -0.16
COL9A1-210ENST00000493682 PRDX2P32119 198 aa14.07□□□□□ -0.16
COL9A1-210ENST00000493682 MNAT1P51948 309 aa14.07□□□□□ -0.16
COL9A1-210ENST00000493682 LGALS4P56470 323 aa14.07□□□□□ -0.16
COL9A1-210ENST00000493682 RIPPLY1Q0D2K3 151 aa14.07□□□□□ -0.16
COL9A1-210ENST00000493682 TRIM25Q14258 630 aaKnown RBP14.07□□□□□ -0.16
COL9A1-210ENST00000493682 HABP2Q14520 560 aaPredicted RBP14.07□□□□□ -0.16
COL9A1-210ENST00000493682 SMIM21Q3B7S5 101 aa14.07□□□□□ -0.16
COL9A1-210ENST00000493682 NSUN5P1Q3KNT7 163 aa14.07□□□□□ -0.16
COL9A1-210ENST00000493682 SLC35D3Q5M8T2 416 aa14.07□□□□□ -0.16
COL9A1-210ENST00000493682 PLCXD3Q63HM9 321 aa14.07□□□□□ -0.16
COL9A1-210ENST00000493682 COMMD2Q86X83 199 aa14.07□□□□□ -0.16
COL9A1-210ENST00000493682 ZNF561Q8N587 486 aa14.07□□□□□ -0.16
COL9A1-210ENST00000493682 OR51E1Q8TCB6 317 aa14.07□□□□□ -0.16
COL9A1-210ENST00000493682 ITFG2Q969R8 447 aa14.07□□□□□ -0.16
COL9A1-210ENST00000493682 ZNF702PQ9H963 129 aa14.07□□□□□ -0.16
COL9A1-210ENST00000493682 SERTAD4Q9NUC0 356 aa14.07□□□□□ -0.16
COL9A1-210ENST00000493682 USE1Q9NZ43 259 aa14.07□□□□□ -0.16
COL9A1-210ENST00000493682 hCG_1809904A0A1W2PP81 198 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 A0A1W2PPE2 198 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 A0A1W2PR64 198 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 A0A1W2PRV1 198 aa14.06□□□□□ -0.16
COL9A1-210ENST00000493682 FAM90A8PA6NJQ4 464 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms