RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 OR4S1Q8NGB4 309 aa9.48□□□□□ -0.89
COL6A3-213ENST00000493475 OR5A2Q8NGI9 324 aa9.48□□□□□ -0.89
COL6A3-213ENST00000493475 ASB17Q8WXJ9 295 aa9.48□□□□□ -0.89
COL6A3-213ENST00000493475 GAFA1Q96PS6 74 aa9.48□□□□□ -0.89
COL6A3-213ENST00000493475 SSX3Q99909 188 aa9.48□□□□□ -0.89
COL6A3-213ENST00000493475 WDR13Q9H1Z4 485 aa9.48□□□□□ -0.89
COL6A3-213ENST00000493475 C1orf21Q9H246 121 aa9.48□□□□□ -0.89
COL6A3-213ENST00000493475 ABCB10Q9NRK6 738 aa9.48□□□□□ -0.89
COL6A3-213ENST00000493475 ENPP5Q9UJA9 477 aa9.48□□□□□ -0.89
COL6A3-213ENST00000493475 TMEM269A0A1B0GVZ9 245 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 A0A1B0GW55 424 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 B2RBV5 119 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 ZNF732B4DXR9 585 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 XPNPEP2O43895 674 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 TSPAN15O95858 294 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 ALDOBP05062 364 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 DUX4L2P0CJ85 424 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 DUX4L3P0CJ86 424 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 DUX4L4P0CJ87 422 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 DUX4L5P0CJ88 424 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 DUX4L6P0CJ89 424 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 DUX4L7P0CJ90 424 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 VSIG8P0DPA2 414 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 PSKH1P11801 424 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 ATP6V1B2P21281 511 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 DCTDP32321 178 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 KIR2DS4P43632 304 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 ERVFRD-1P60508 538 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 RPL31P62899 125 aaKnown RBP9.47□□□□□ -0.89
COL6A3-213ENST00000493475 KLRD1Q13241 179 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 GINS1Q14691 196 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 DGUOKQ16854 277 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 ARSJQ5FYB0 599 aaPredicted RBP9.47□□□□□ -0.89
COL6A3-213ENST00000493475 PLCXD3Q63HM9 321 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 SLC35E4Q6ICL7 350 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 DUX4L9Q6RFH8 374 aaPredicted RBP9.47□□□□□ -0.89
COL6A3-213ENST00000493475 Q8N7P7 452 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 OR8B12Q8NGG6 310 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 OR5K1Q8NHB7 308 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 DNAJC9Q8WXX5 260 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 PPP1R14AQ96A00 147 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 FOXRED1Q96CU9 486 aaPredicted RBP9.47□□□□□ -0.89
COL6A3-213ENST00000493475 ASB9Q96DX5 294 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 FEVQ99581 238 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 YIPF3Q9GZM5 350 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 SEMA6AQ9H2E6 1030 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 MOB1AQ9H8S9 216 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 MED20Q9H944 212 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 ARL8BQ9NVJ2 186 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 USE1Q9NZ43 259 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 DUX4Q9UBX2 424 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 PITPNC1Q9UKF7 332 aa9.47□□□□□ -0.89
COL6A3-213ENST00000493475 WNK1Q9H4A3 2382 aa9.46□□□□□ -0.89
COL6A3-213ENST00000493475 SELENOFO60613 162 aa9.46□□□□□ -0.9
COL6A3-213ENST00000493475 OPN1MWP04001 364 aa9.46□□□□□ -0.9
COL6A3-213ENST00000493475 OPN1MW2P0DN77 364 aa9.46□□□□□ -0.9
COL6A3-213ENST00000493475 OPN1MW3P0DN78 364 aa9.46□□□□□ -0.9
COL6A3-213ENST00000493475 OSMP13725 252 aa9.46□□□□□ -0.9
COL6A3-213ENST00000493475 ANXA8P13928 327 aa9.46□□□□□ -0.9
COL6A3-213ENST00000493475 CALB2P22676 271 aa9.46□□□□□ -0.9
COL6A3-213ENST00000493475 RIDAP52758 137 aaKnown RBP9.46□□□□□ -0.9
COL6A3-213ENST00000493475 GNGT1P63211 74 aa9.46□□□□□ -0.9
COL6A3-213ENST00000493475 EMX1Q04741 257 aaPredicted RBP9.46□□□□□ -0.9
COL6A3-213ENST00000493475 PPP1R8Q12972 351 aaKnown RBP9.46□□□□□ -0.9
COL6A3-213ENST00000493475 MOB3CQ70IA8 216 aa9.46□□□□□ -0.9
COL6A3-213ENST00000493475 IQCF1Q8N6M8 205 aa9.46□□□□□ -0.9
COL6A3-213ENST00000493475 TNFRSF14Q92956 283 aa9.46□□□□□ -0.9
COL6A3-213ENST00000493475 SEH1LQ96EE3 360 aa9.46□□□□□ -0.9
COL6A3-213ENST00000493475 SDSLQ96GA7 329 aa9.46□□□□□ -0.9
COL6A3-213ENST00000493475 NSL1Q96IY1 281 aa9.46□□□□□ -0.9
COL6A3-213ENST00000493475 NIPSNAP1Q9BPW8 284 aa9.46□□□□□ -0.9
COL6A3-213ENST00000493475 CDCA4Q9BXL8 241 aa9.46□□□□□ -0.9
COL6A3-213ENST00000493475 OR51I2Q9H344 312 aa9.46□□□□□ -0.9
COL6A3-213ENST00000493475 H2AFY2Q9P0M6 372 aaPredicted RBP9.46□□□□□ -0.9
COL6A3-213ENST00000493475 TCRBV5S2A0A599 114 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 FCN3O75636 299 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 NXPH2O95156 264 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 FAM107AO95990 144 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 PSG2P11465 335 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 FAHP16930 419 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 ANOS1P23352 680 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 ACKR3P25106 362 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 KRTAP10-3P60369 221 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 ESRRGP62508 458 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 CBX1P83916 185 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 LY6EQ16553 131 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 CEP78Q5JTW2 689 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 HAGHLQ6PII5 290 aaPredicted RBP9.45□□□□□ -0.9
COL6A3-213ENST00000493475 CALHM1Q8IU99 346 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 CPOQ8IVL8 374 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 FGFRL1Q8N441 504 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 ZNRF1Q8ND25 227 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 OR4F17Q8NGA8 305 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 OR13D1Q8NGV5 346 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 HPSE2Q8WWQ2 592 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 AQP3Q92482 292 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 CCDC124Q96CT7 223 aaKnown RBP9.45□□□□□ -0.9
COL6A3-213ENST00000493475 OR4F4Q96R69 305 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 AMELYQ99218 206 aa9.45□□□□□ -0.9
COL6A3-213ENST00000493475 MNTQ99583 582 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms