RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 CNN3Q15417 329 aaKnown RBP11.94□□□□□ -0.5
SMPD4-219ENST00000491128 PLAC9Q5JTB6 97 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 SLC25A26Q70HW3 274 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 C1orf162Q8NEQ5 155 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-219ENST00000491128 OR4D10Q8NGI6 311 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 OR51T1Q8NGJ9 327 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 ZNF488Q96MN9 340 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 HEATR1Q9H583 2144 aaKnown RBP11.94□□□□□ -0.5
SMPD4-219ENST00000491128 ITGB1BP2Q9UKP3 347 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 SLC7A11Q9UPY5 501 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 IGHV2OR16-5A0A0B4J2B6 119 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 ZNF732B4DXR9 585 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 MSTNO14793 375 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 ZNF35P13682 527 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 MNDAP41218 407 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 RBPJQ06330 500 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 CDSNQ15517 529 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 PIGYQ3MUY2 71 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 CDNFQ49AH0 187 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 DPPA2Q7Z7J5 298 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 GVQW1Q8N7I0 195 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 OR10AD1Q8NGE0 317 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 ENKURQ8TC29 256 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 KLF14Q8TD94 323 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-219ENST00000491128 ZNF391Q9UJN7 358 aa11.94□□□□□ -0.5
SMPD4-219ENST00000491128 FAM240BA0A1B0GVZ2 78 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 DHRS7CA6NNS2 312 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 GABARAPH6UMI1 98 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 GSTT2P0CG29 244 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 GSTT2BP0CG30 244 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 TMEM50BP56557 158 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 PPA1Q15181 289 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 RSU1Q15404 277 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 TAF9Q16594 264 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 MSMPQ1L6U9 139 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 Q6ZTK2 550 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 LRP11Q86VZ4 500 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 CCDC36Q8IYA8 594 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 CADM3Q8N126 398 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 ZNF611Q8N823 705 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 OR4S1Q8NGB4 309 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 OR51F2Q8NH61 342 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 C10orf35Q96D05 121 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 SLC22A4Q9H015 551 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 MCUBQ9NWR8 336 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 IL36RNQ9UBH0 155 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 RALYQ9UKM9 306 aaKnown RBP11.93□□□□□ -0.5
SMPD4-219ENST00000491128 SHANK1Q9Y566 2161 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 METTL21EPA6NDL7 271 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 CCL21O00585 134 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 NAT2P11245 290 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 BTCP35070 178 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 EIF2S3LQ2VIR3 472 aaKnown RBP11.93□□□□□ -0.5
SMPD4-219ENST00000491128 ZDHHC23Q8IYP9 409 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 OR5L1Q8NGL2 311 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 RND1Q92730 232 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 SLAMF9Q96A28 289 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 SPSB1Q96BD6 273 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 MUCL1Q96DR8 90 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 ARHGAP5-AS1Q96IT6 56 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 BEX2Q9BXY8 128 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 BEX1Q9HBH7 125 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 MSL2Q9HCI7 577 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 KCNK7Q9Y2U2 307 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 CACNG2Q9Y698 323 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 LRBAP50851 2863 aa11.93□□□□□ -0.5
SMPD4-219ENST00000491128 FAM90A27PA6NNH2 459 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 CSN2P05814 226 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 HOXD4P09016 255 aaPredicted RBP11.92□□□□□ -0.5
SMPD4-219ENST00000491128 GIFP27352 417 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 GRNP28799 593 aaKnown RBP11.92□□□□□ -0.5
SMPD4-219ENST00000491128 PRSS3P35030 304 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 FUT6P51993 359 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 SCAND1P57086 179 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 PCGF3Q3KNV8 242 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 NKAPLQ5M9Q1 402 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 WFDC8Q8IUA0 241 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 KCNG3Q8TAE7 436 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 MAFIPQ8WZ33 124 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 DYRK2Q92630 601 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 SEH1LQ96EE3 360 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 NKIRAS2Q9NYR9 191 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 DUSP13Q9UII6 198 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 MEMO1Q9Y316 297 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 TRAV6A0A075B6T7 132 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 ANKRD30BLA7E2S9 258 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 SYNGR1O43759 233 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 IGLV1-44P01699 117 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 PSMB1P20618 241 aaKnown RBP11.92□□□□□ -0.5
SMPD4-219ENST00000491128 PRKACBP22694 351 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 HLA-DMAP28067 261 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 DUSP1P28562 367 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 EIF2B2P49770 351 aaKnown RBP11.92□□□□□ -0.5
SMPD4-219ENST00000491128 ATP1B3P54709 279 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 NAAAQ02083 359 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 PDZK1IP1Q13113 114 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 SNTB2Q13425 540 aaKnown RBP11.92□□□□□ -0.5
SMPD4-219ENST00000491128 KLF9Q13886 244 aaPredicted RBP11.92□□□□□ -0.5
SMPD4-219ENST00000491128 TIMM23BQ5SRD1 257 aa11.92□□□□□ -0.5
SMPD4-219ENST00000491128 PIAS4Q8N2W9 510 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms