RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 RBM24Q9BX46 236 aaKnown RBP10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 BARX1Q9HBU1 254 aaPredicted RBP10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 BLACEA4D250 179 aa10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 NPIPA2E9PIF3 369 aa10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 NPIPA3F8WFD2 350 aa10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 ONECUT2O95948 504 aa10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 OR5AC1P0C628 307 aa10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 PPP1CCP36873 323 aaKnown RBP10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 ZNF92Q03936 586 aa10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 TMEM241Q24JQ0 296 aa10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 PRICKLE4Q2TBC4 344 aa10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 BTNL8Q6UX41 500 aa10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 SMIM15Q7Z3B0 74 aa10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 TIPARPQ7Z3E1 657 aaKnown RBP10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 CA13Q8N1Q1 262 aa10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 GPR137CQ8N3F9 429 aa10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 IL22RA2Q969J5 263 aa10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 GFI1Q99684 422 aa10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 NDUFAF3Q9BU61 184 aa10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 EMC6Q9BV81 110 aa10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 HDAC8Q9BY41 377 aa10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 CBLN4Q9NTU7 201 aa10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 TMEM100Q9NV29 134 aa10.06□□□□□ -0.8
CRNKL1-204ENST00000490910 CTSDP07339 412 aaPredicted RBP10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 DANCRP0C864 163 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 CTLA4P16410 223 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 FHITP49789 147 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 SUMO1P63165 101 aaKnown RBP10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 VAMP3Q15836 100 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 TMEM31Q5JXX7 168 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 SPNS3Q6ZMD2 512 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 VN1R4Q7Z5H5 301 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 FGF11Q92914 225 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 MCHR2Q969V1 340 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 DEFB118Q96PH6 123 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 WWTR1Q9GZV5 400 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 NAA60Q9H7X0 242 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 MYOTQ9UBF9 498 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 BRCA1P38398 1863 aaKnown RBP10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 GREB1Q4ZG55 1949 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 PMS2P1A4D2B8 440 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 CDC14BO60729 498 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 CT62P0C5K7 136 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 ACAA2P42765 397 aaKnown RBP10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 HHEXQ03014 270 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 C1orf61Q13536 156 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 ANKRD55Q3KP44 614 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 VAX1Q5SQQ9 334 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 ZNF880Q6PDB4 577 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 CATSPERDQ86XM0 798 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 C7orf61Q8IZ16 206 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 OR4C5Q8NGB2 326 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 ANKRD9Q96BM1 317 aaPredicted RBP10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 CTDSP1Q9GZU7 261 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 DVL1O14640 695 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 DEDDO75618 318 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 CD5P06127 495 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 HOXB2P14652 356 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 HNF1AP20823 631 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 GPM6BQ13491 265 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 DEGS2Q6QHC5 323 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 ZNF574Q6ZN55 896 aaPredicted RBP10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 H1FNTQ75WM6 255 aaPredicted RBP10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 GRINAQ7Z429 371 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 BIVMQ86UB2 503 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 ARL6IP6Q8N6S5 226 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 BORCS7Q96B45 105 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 TECTBQ96PL2 329 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 IGFLR1Q9H665 355 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 ZDHHC11Q9H8X9 412 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 TBC1D29Q9UFV1 150 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 TRAPPC1Q9Y5R8 145 aa10.05□□□□□ -0.8
CRNKL1-204ENST00000490910 H3BP45 60 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 DBHP09172 617 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 ATP6V0CP27449 155 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 OR10J1P30954 320 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 DCAF7P61962 342 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 PAX5Q02548 391 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 ZNF141Q15928 474 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 ZNF542PQ5EBM4 170 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 SLC35E3Q7Z769 313 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 SIGLECL1Q8N7X8 197 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 OR1P1Q8NH06 330 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 SDSLQ96GA7 329 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 RNF126Q9BV68 326 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 ELOVL1Q9BW60 279 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 OSGIN2Q9Y236 505 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 TDRD15B5MCY1 1934 aaKnown RBP10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 FAM221AA4D161 298 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 OPN1LWP04000 364 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 HNRNPA3P51991 378 aaKnown RBP10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 MLF1P58340 268 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 DCDP81605 110 aaKnown RBP10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 PRTGQ2VWP7 1150 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 APCDD1LQ8NCL9 501 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 AQP3Q92482 292 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 HLA-CQ95604 372 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 REEP6Q96HR9 211 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 Q9N2K0 584 aa10.04□□□□□ -0.8
CRNKL1-204ENST00000490910 METTL12A8MUP2 240 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms