RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 TMEM179Q6ZVK1 233 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 TRAPPC5Q8IUR0 188 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 C10orf67Q8IYJ2 551 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 ATPAF2Q8N5M1 289 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 OR4F15Q8NGB8 312 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 OR5L1Q8NGL2 311 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 C22orf15Q8WYQ4 148 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 HGDQ93099 445 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 PIK3IP1Q96FE7 263 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 CEP170P1Q96L14 293 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 PACRGQ96M98 296 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 MBOAT7Q96N66 472 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 WFIKKN1Q96NZ8 548 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 STACQ99469 402 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 VAT1Q99536 393 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 PDCD1LG2Q9BQ51 273 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 RIOK2Q9BVS4 552 aaKnown RBP3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 NXF2Q9GZY0 626 aaKnown RBP3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 MFSD1Q9H3U5 465 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 KLF12Q9Y4X4 402 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 MTCH2Q9Y6C9 303 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 PHF3Q92576 2039 aaKnown RBP3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 SCN2AQ99250 2005 aa3.02□□□□□ -1.93
HMGB1P38-201ENST00000490557 ANKRD30AQ9BXX3 1397 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 FRMPD3Q5JV73 1810 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 A0A096LNJ9 63 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 C11orf94C9JXX5 98 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 ANKRD65E5RJM6 399 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 F5H768 121 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 K7EMT4 169 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 PFDN6O15212 129 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 ACOX3O15254 700 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 SLC31A2O15432 143 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 FGF16O43320 207 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 TGOLN2O43493 480 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 DPM1O60762 260 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 SHOX2O60902 331 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 RLN2P04090 185 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 CALB1P05937 261 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 LIMS3P0CW19 117 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 LIMS4P0CW20 117 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 ZNF35P13682 527 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 GABRG2P18507 467 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 LOXP28300 417 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 GTF2H1P32780 548 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 BTCP35070 178 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 RPA3P35244 121 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 GPR6P46095 362 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 IDH2P48735 452 aaKnown RBP3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 FABP6P51161 128 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 STC1P52823 247 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 AQP5P55064 265 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 CCL7P80098 99 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 SEMG2Q02383 582 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 ACVR1Q04771 509 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 ZNF726P1Q15940 193 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 GUK1Q16774 197 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 COA6Q5JTJ3 125 aaKnown RBP3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 MED27Q6P2C8 311 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 RTL4Q6ZR62 310 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 CCDC121Q6ZUS5 278 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 NCCRP1Q6ZVX7 275 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 MRPL55Q7Z7F7 128 aaKnown RBP3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 CBLN2Q8IUK8 224 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 WDFY1Q8IWB7 410 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 OR5AR1Q8NGP9 310 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 OR10R2Q8NGX6 335 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 OR2AE1Q8NHA4 323 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 TMEM234Q8WY98 164 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 TMEM54Q969K7 222 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 DGCR14Q96DF8 476 aaKnown RBP3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 ZNF488Q96MN9 340 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 GPR22Q99680 433 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 APOL4Q9BPW4 351 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 OSBPL11Q9BXB4 747 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 ARL6Q9H0F7 186 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 DEFB127Q9H1M4 99 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 CDC42EP4Q9H3Q1 356 aaKnown RBP3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 MED4Q9NPJ6 270 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 C8orf4Q9NR00 106 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 SLC2A9Q9NRM0 540 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 CLCF1Q9UBD9 225 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 AP3M1Q9Y2T2 418 aa3.01□□□□□ -1.93
HMGB1P38-201ENST00000490557 MSH6P52701 1360 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 KIAA0232Q92628 1395 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 A6NDN8 102 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 OR2AT4A6NND4 320 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 CDIPTO14735 213 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 FABP7O15540 132 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 TNNC2P02585 160 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 ISG15P05161 165 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 CDK1P06493 297 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 OR5AL1P0C617 328 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 OR4E1P0C645 316 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 UGT2B7P16662 529 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 GGT1P19440 569 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 USF1P22415 310 aaPredicted RBP3□□□□□ -1.93
HMGB1P38-201ENST00000490557 AK4P27144 223 aaPredicted RBP3□□□□□ -1.93
HMGB1P38-201ENST00000490557 HRH1P35367 487 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 GPX4P36969 197 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms