RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 FAM86B1Q8N7N1 296 aa6.59□□□□□ -1.35
USP39-216ENST00000490193 SLC37A3Q8NCC5 494 aa6.59□□□□□ -1.35
USP39-216ENST00000490193 TMEM185AQ8NFB2 350 aa6.59□□□□□ -1.35
USP39-216ENST00000490193 OR51L1Q8NGJ5 315 aa6.59□□□□□ -1.35
USP39-216ENST00000490193 RP9Q8TA86 221 aaKnown RBP6.59□□□□□ -1.35
USP39-216ENST00000490193 GNPDA2Q8TDQ7 276 aa6.59□□□□□ -1.35
USP39-216ENST00000490193 MALSU1Q96EH3 234 aa6.59□□□□□ -1.35
USP39-216ENST00000490193 OR10A2Q9H208 303 aa6.59□□□□□ -1.35
USP39-216ENST00000490193 MUC13Q9H3R2 512 aa6.59□□□□□ -1.35
USP39-216ENST00000490193 IL20Q9NYY1 176 aa6.59□□□□□ -1.35
USP39-216ENST00000490193 USE1Q9NZ43 259 aa6.59□□□□□ -1.35
USP39-216ENST00000490193 ABCD2Q9UBJ2 740 aa6.59□□□□□ -1.35
USP39-216ENST00000490193 CDH10Q9Y6N8 788 aa6.59□□□□□ -1.35
USP39-216ENST00000490193 STAB2Q8WWQ8 2551 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 ZNF850A8MQ14 1090 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 E9PQ18 207 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 SYNGR1O43759 233 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 PEX14O75381 377 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 MTRF1O75570 445 aaKnown RBP6.58□□□□□ -1.36
USP39-216ENST00000490193 RHBDL1O75783 438 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 RBP4P02753 201 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 PF4V1P10720 104 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 SPI1P17947 270 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 OPRL1P41146 370 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 VDAC2P45880 294 aaPredicted RBP6.58□□□□□ -1.36
USP39-216ENST00000490193 GABRA2P47869 451 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 RAB13P51153 203 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 RPL31P62899 125 aaKnown RBP6.58□□□□□ -1.36
USP39-216ENST00000490193 BLCAPP62952 87 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 GNG3P63215 75 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 CRMP1Q14194 572 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 DEFB121Q5J5C9 76 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 TCTEX1D4Q5JR98 221 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 LDLRAD2Q5SZI1 272 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 LINC01590Q5TEZ4 76 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 ZNF626Q68DY1 528 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 TMEM200BQ69YZ2 307 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 GLYATQ6IB77 296 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 CGB2Q6NT52 195 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 Q6ZS46 218 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 FAM57BQ71RH2 274 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 THAP5Q7Z6K1 395 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 TMEM219Q86XT9 240 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 ZDHHC23Q8IYP9 409 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 OR5AU1Q8NGC0 362 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 OR11H6Q8NGC7 330 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 OR52L1Q8NGH7 329 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 ITFG2Q969R8 447 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 RNF170Q96K19 258 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 KCTD14Q9BQ13 255 aaPredicted RBP6.58□□□□□ -1.36
USP39-216ENST00000490193 ABHD6Q9BV23 337 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 GPR61Q9BZJ8 451 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 OR51I2Q9H344 312 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 EGLN3Q9H6Z9 239 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 ABCB10Q9NRK6 738 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 RASL12Q9NYN1 266 aa6.58□□□□□ -1.36
USP39-216ENST00000490193 TSSC4Q9Y5U2 329 aaPredicted RBP6.58□□□□□ -1.36
USP39-216ENST00000490193 DYNC2H1Q8NCM8 4307 aaKnown RBP6.57□□□□□ -1.36
USP39-216ENST00000490193 A0A1W2PRX2 142 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 C17orf98A8MV24 154 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 FAM90A22PA8MWA6 464 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 F2RL2O00254 374 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 PF4P02776 101 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 GYPBP06028 91 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 COX4I1P13073 169 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 CCL3L1P16619 93 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 COX7A1P24310 79 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 AZGP1P25311 298 aaKnown RBP6.57□□□□□ -1.36
USP39-216ENST00000490193 DLX6P56179 175 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 EIF2B1Q14232 305 aaKnown RBP6.57□□□□□ -1.36
USP39-216ENST00000490193 ZNF273Q14593 569 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 GFOD2Q3B7J2 385 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 TMEM95Q3KNT9 176 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 CEACAM21Q3KPI0 293 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 KCTD8Q6ZWB6 473 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 TIGD4Q8IY51 512 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 ZNF561Q8N587 486 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 OR8D4Q8NGM9 314 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 ZNF671Q8TAW3 534 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 AQP3Q92482 292 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 PIGCQ92535 297 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 PGAM5Q96HS1 289 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 PYURFQ96I23 114 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 LYZL4Q96KX0 146 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 OR5M11Q96RB7 305 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 AMELYQ99218 206 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 YY1AP1Q9H869 796 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 GORASP2Q9H8Y8 452 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 EFCAB1Q9HAE3 211 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 INPP5EQ9NRR6 644 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.57□□□□□ -1.36
USP39-216ENST00000490193 BAIAP2Q9UQB8 552 aa6.57□□□□□ -1.36
USP39-216ENST00000490193 OR5B21A6NL26 309 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 RFPL4AA6NLU0 287 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 ZNF732B4DXR9 585 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 RFPL4AL1F8VTS6 287 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 SLC1A7O00341 560 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 NOS1APO75052 506 aaPredicted RBP6.56□□□□□ -1.36
USP39-216ENST00000490193 H2BFMP0C1H6 154 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 NHLRC4P0CG21 123 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms