RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 LYG1Q8N1E2 194 aa12.88□□□□□ -0.35
PLOD3-216ENST00000489927 ZNF454Q8N9F8 522 aa12.88□□□□□ -0.35
PLOD3-216ENST00000489927 OR10G2Q8NGC3 310 aa12.88□□□□□ -0.35
PLOD3-216ENST00000489927 OR2T29Q8NH02 315 aa12.88□□□□□ -0.35
PLOD3-216ENST00000489927 NPFFR1Q9GZQ6 430 aa12.88□□□□□ -0.35
PLOD3-216ENST00000489927 MAGIXQ9H6Y5 334 aa12.88□□□□□ -0.35
PLOD3-216ENST00000489927 MED4Q9NPJ6 270 aa12.88□□□□□ -0.35
PLOD3-216ENST00000489927 DNAH3Q8TD57 4116 aa12.88□□□□□ -0.35
PLOD3-216ENST00000489927 PLXNB1O43157 2135 aa12.87□□□□□ -0.35
PLOD3-216ENST00000489927 ALX3O95076 343 aa12.87□□□□□ -0.35
PLOD3-216ENST00000489927 PAICSP22234 425 aaKnown RBP12.87□□□□□ -0.35
PLOD3-216ENST00000489927 BMXP51813 675 aa12.87□□□□□ -0.35
PLOD3-216ENST00000489927 OXLD1Q5BKU9 147 aa12.87□□□□□ -0.35
PLOD3-216ENST00000489927 KRT74Q7RTS7 529 aa12.87□□□□□ -0.35
PLOD3-216ENST00000489927 THAP5Q7Z6K1 395 aa12.87□□□□□ -0.35
PLOD3-216ENST00000489927 C11orf42Q8N5U0 333 aa12.87□□□□□ -0.35
PLOD3-216ENST00000489927 OR5K1Q8NHB7 308 aa12.87□□□□□ -0.35
PLOD3-216ENST00000489927 ZNF671Q8TAW3 534 aa12.87□□□□□ -0.35
PLOD3-216ENST00000489927 FAM81AQ8TBF8 368 aa12.87□□□□□ -0.35
PLOD3-216ENST00000489927 LRP12Q9Y561 859 aa12.87□□□□□ -0.35
PLOD3-216ENST00000489927 PRR23D1E9PI22 279 aaPredicted RBP12.86□□□□□ -0.35
PLOD3-216ENST00000489927 MTRF1O75570 445 aaKnown RBP12.86□□□□□ -0.35
PLOD3-216ENST00000489927 PRR23D2P0DMB1 279 aaPredicted RBP12.86□□□□□ -0.35
PLOD3-216ENST00000489927 COX7A1P24310 79 aa12.86□□□□□ -0.35
PLOD3-216ENST00000489927 MAP2K3P46734 347 aa12.86□□□□□ -0.35
PLOD3-216ENST00000489927 ERVFRD-1P60508 538 aa12.86□□□□□ -0.35
PLOD3-216ENST00000489927 RPL31P62899 125 aaKnown RBP12.86□□□□□ -0.35
PLOD3-216ENST00000489927 HABP2Q14520 560 aaPredicted RBP12.86□□□□□ -0.35
PLOD3-216ENST00000489927 NSUN5P1Q3KNT7 163 aa12.86□□□□□ -0.35
PLOD3-216ENST00000489927 TMEM200BQ69YZ2 307 aa12.86□□□□□ -0.35
PLOD3-216ENST00000489927 HAGHLQ6PII5 290 aaPredicted RBP12.86□□□□□ -0.35
PLOD3-216ENST00000489927 LIAT1Q6ZQX7 453 aa12.86□□□□□ -0.35
PLOD3-216ENST00000489927 CD177Q8N6Q3 437 aa12.86□□□□□ -0.35
PLOD3-216ENST00000489927 AQP3Q92482 292 aa12.86□□□□□ -0.35
PLOD3-216ENST00000489927 PPP1R14AQ96A00 147 aa12.86□□□□□ -0.35
PLOD3-216ENST00000489927 FEVQ99581 238 aa12.86□□□□□ -0.35
PLOD3-216ENST00000489927 NKX3-1Q99801 234 aaPredicted RBP12.86□□□□□ -0.35
PLOD3-216ENST00000489927 NIPAL2Q9H841 368 aa12.86□□□□□ -0.35
PLOD3-216ENST00000489927 HEXA-AS1Q9H8Q6 139 aa12.86□□□□□ -0.35
PLOD3-216ENST00000489927 SERTAD4Q9NUC0 356 aa12.86□□□□□ -0.35
PLOD3-216ENST00000489927 NDE1Q9NXR1 346 aa12.86□□□□□ -0.35
PLOD3-216ENST00000489927 OR5B21A6NL26 309 aa12.85□□□□□ -0.35
PLOD3-216ENST00000489927 RFPL4AA6NLU0 287 aa12.85□□□□□ -0.35
PLOD3-216ENST00000489927 RFPL4AL1F8VTS6 287 aa12.85□□□□□ -0.35
PLOD3-216ENST00000489927 CD28P10747 220 aa12.85□□□□□ -0.35
PLOD3-216ENST00000489927 CCL3L1P16619 93 aa12.85□□□□□ -0.35
PLOD3-216ENST00000489927 ACP7Q6ZNF0 438 aa12.85□□□□□ -0.35
PLOD3-216ENST00000489927 TRPM8Q7Z2W7 1104 aa12.85□□□□□ -0.35
PLOD3-216ENST00000489927 LHFPL4Q7Z7J7 247 aa12.85□□□□□ -0.35
PLOD3-216ENST00000489927 OR4M1Q8NGD0 313 aa12.85□□□□□ -0.35
PLOD3-216ENST00000489927 OR5A2Q8NGI9 324 aa12.85□□□□□ -0.35
PLOD3-216ENST00000489927 MRAPQ8TCY5 172 aa12.85□□□□□ -0.35
PLOD3-216ENST00000489927 ZNF488Q96MN9 340 aa12.85□□□□□ -0.35
PLOD3-216ENST00000489927 ZNF702PQ9H963 129 aa12.85□□□□□ -0.35
PLOD3-216ENST00000489927 FAM206AQ9NX38 181 aa12.85□□□□□ -0.35
PLOD3-216ENST00000489927 RASL12Q9NYN1 266 aa12.85□□□□□ -0.35
PLOD3-216ENST00000489927 KMT2CQ8NEZ4 4911 aaKnown RBP12.85□□□□□ -0.35
PLOD3-216ENST00000489927 A0A0U1RQV5 110 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 A0A1W2PPH5 198 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 PSMD9O00233 223 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 PRODHO43272 600 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 XPNPEP2O43895 674 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 FBXO24O75426 580 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 ALOX5APP20292 161 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 PRDX2P32119 198 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 CEBPDP49716 269 aaPredicted RBP12.84□□□□□ -0.35
PLOD3-216ENST00000489927 RAB13P51153 203 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 HCCSP53701 268 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 LGALS4P56470 323 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 GINS1Q14691 196 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 SMIM21Q3B7S5 101 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 FAM98BQ52LJ0 330 aaKnown RBP12.84□□□□□ -0.35
PLOD3-216ENST00000489927 PLA1AQ53H76 456 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 PLCXD3Q63HM9 321 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 LCN8Q6JVE9 175 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 MOB3CQ70IA8 216 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 KRT77Q7Z794 578 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 DHFR2Q86XF0 187 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 CPOQ8IVL8 374 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 DYNAPQ8N1N2 210 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 ZNF561Q8N587 486 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 DTX3Q8N9I9 347 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 POC1AQ8NBT0 407 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 BBS1Q8NFJ9 593 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 GIPC3Q8TF64 312 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 MMP28Q9H239 520 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 USE1Q9NZ43 259 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 LAMP5Q9UJQ1 280 aa12.84□□□□□ -0.35
PLOD3-216ENST00000489927 TMEM269A0A1B0GVZ9 245 aa12.83□□□□□ -0.36
PLOD3-216ENST00000489927 hCG_1809904A0A1W2PP81 198 aa12.83□□□□□ -0.36
PLOD3-216ENST00000489927 A0A1W2PPE2 198 aa12.83□□□□□ -0.36
PLOD3-216ENST00000489927 A0A1W2PR64 198 aa12.83□□□□□ -0.36
PLOD3-216ENST00000489927 A0A1W2PRV1 198 aa12.83□□□□□ -0.36
PLOD3-216ENST00000489927 FAM90A8PA6NJQ4 464 aa12.83□□□□□ -0.36
PLOD3-216ENST00000489927 VGLL3A8MV65 326 aa12.83□□□□□ -0.36
PLOD3-216ENST00000489927 SLC1A7O00341 560 aa12.83□□□□□ -0.36
PLOD3-216ENST00000489927 SYNGR1O43759 233 aa12.83□□□□□ -0.36
PLOD3-216ENST00000489927 FAHP16930 419 aa12.83□□□□□ -0.36
PLOD3-216ENST00000489927 MS4A2Q01362 244 aa12.83□□□□□ -0.36
PLOD3-216ENST00000489927 EMX1Q04741 257 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms