RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 KLHDC1Q8N7A1 406 aa10.08□□□□□ -0.8
CPSF3-204ENST00000489403 C11orf44Q8N8P7 122 aa10.08□□□□□ -0.8
CPSF3-204ENST00000489403 BBS1Q8NFJ9 593 aa10.08□□□□□ -0.8
CPSF3-204ENST00000489403 OR4C13Q8NGP0 309 aa10.08□□□□□ -0.8
CPSF3-204ENST00000489403 GIPC3Q8TF64 312 aa10.08□□□□□ -0.8
CPSF3-204ENST00000489403 AQP3Q92482 292 aa10.08□□□□□ -0.8
CPSF3-204ENST00000489403 CFHR4Q92496 578 aa10.08□□□□□ -0.8
CPSF3-204ENST00000489403 SDSLQ96GA7 329 aa10.08□□□□□ -0.8
CPSF3-204ENST00000489403 RANBP3Q9H6Z4 567 aaPredicted RBP10.08□□□□□ -0.8
CPSF3-204ENST00000489403 YY1AP1Q9H869 796 aa10.08□□□□□ -0.8
CPSF3-204ENST00000489403 FAM206AQ9NX38 181 aa10.08□□□□□ -0.8
CPSF3-204ENST00000489403 PLXNB1O43157 2135 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 A0A0U1RQV5 110 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 PSMD9O00233 223 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 MTRF1O75570 445 aaKnown RBP10.07□□□□□ -0.8
CPSF3-204ENST00000489403 CST1P01037 141 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 IGLV3-1P01715 115 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 ALOX5APP20292 161 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 MAP2K3P46734 347 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 BMXP51813 675 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 TRIM25Q14258 630 aaKnown RBP10.07□□□□□ -0.8
CPSF3-204ENST00000489403 GK3PQ14409 553 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 GINS1Q14691 196 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 AANATQ16613 207 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 SLC35D3Q5M8T2 416 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 KPRPQ5T749 579 aaPredicted RBP10.07□□□□□ -0.8
CPSF3-204ENST00000489403 C11orf88Q6PI97 169 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 HAGHLQ6PII5 290 aaPredicted RBP10.07□□□□□ -0.8
CPSF3-204ENST00000489403 ACP7Q6ZNF0 438 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 THAP5Q7Z6K1 395 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 KRT77Q7Z794 578 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 PIGWQ7Z7B1 504 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 TMEM179BQ7Z7N9 219 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 CPOQ8IVL8 374 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 ARHGAP24Q8N264 748 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 C11orf42Q8N5U0 333 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 OR5A2Q8NGI9 324 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 OR5K1Q8NHB7 308 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 OR2T6Q8NHC8 308 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 FAM234AQ9H0X4 552 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 LAMP5Q9UJQ1 280 aa10.07□□□□□ -0.8
CPSF3-204ENST00000489403 DNAH3Q8TD57 4116 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 OR5B21A6NL26 309 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 RFPL4AA6NLU0 287 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 B2RBV5 119 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 RFPL4AL1F8VTS6 287 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 CHST1O43916 411 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 PRB2P02812 416 aaPredicted RBP10.06□□□□□ -0.8
CPSF3-204ENST00000489403 RAP2AP10114 183 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 SLC2A5P22732 501 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 CEBPDP49716 269 aaPredicted RBP10.06□□□□□ -0.8
CPSF3-204ENST00000489403 MNAT1P51948 309 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 CAPZA1P52907 286 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 HCCSP53701 268 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 ERVFRD-1P60508 538 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 RPS7P62081 194 aaKnown RBP10.06□□□□□ -0.8
CPSF3-204ENST00000489403 RPL31P62899 125 aaKnown RBP10.06□□□□□ -0.8
CPSF3-204ENST00000489403 GNGT1P63211 74 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 CDK5Q00535 292 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 FBLN7Q53RD9 439 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 PLCXD3Q63HM9 321 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 MOB3CQ70IA8 216 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 CD177Q8N6Q3 437 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 POC1AQ8NBT0 407 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 ZNF671Q8TAW3 534 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 PIFOQ8TCI5 191 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 CLPTM1LQ96KA5 538 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 ZNF488Q96MN9 340 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 CHID1Q9BWS9 393 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 RAB18Q9NP72 206 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 RASL12Q9NYN1 266 aa10.06□□□□□ -0.8
CPSF3-204ENST00000489403 TMEM269A0A1B0GVZ9 245 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 ACOD1A6NK06 481 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 PRR32B1ATL7 298 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 SYNGR1O43759 233 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 VSIG10L2P0DP72 767 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 OSMP13725 252 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 ATP6V1B1P15313 513 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 CCL3L1P16619 93 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 FAHP16930 419 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 GYS2P54840 703 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 ZNF273Q14593 569 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 TMEM200BQ69YZ2 307 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 DEGS2Q6QHC5 323 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 Q6ZPA2 131 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 LIAT1Q6ZQX7 453 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 COMMD2Q86X83 199 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 ADGRG5Q8IZF4 528 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 HS3ST5Q8IZT8 346 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 ZNF561Q8N587 486 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 OR4M1Q8NGD0 313 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 OR51E1Q8TCB6 317 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 ASB9Q96DX5 294 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 TEAD3Q99594 435 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 TTTY10Q9BZA0 68 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 NPFFR1Q9GZQ6 430 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 PBOV1Q9GZY1 135 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 HEXA-AS1Q9H8Q6 139 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 GPR84Q9NQS5 396 aa10.05□□□□□ -0.8
CPSF3-204ENST00000489403 COPS3Q9UNS2 423 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms