RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 IFNA8P32881 189 aa8.94□□□□□ -0.98
HDAC6-233ENST00000489352 DLX6P56179 175 aa8.94□□□□□ -0.98
HDAC6-233ENST00000489352 ABCE1P61221 599 aaKnown RBP8.94□□□□□ -0.98
HDAC6-233ENST00000489352 CKAP4Q07065 602 aaKnown RBP8.94□□□□□ -0.98
HDAC6-233ENST00000489352 HES1Q14469 280 aa8.94□□□□□ -0.98
HDAC6-233ENST00000489352 CCDC144NLQ6NUI1 221 aa8.94□□□□□ -0.98
HDAC6-233ENST00000489352 CEMP1Q6PRD7 247 aaPredicted RBP8.94□□□□□ -0.98
HDAC6-233ENST00000489352 C11orf65Q8NCR3 313 aa8.94□□□□□ -0.98
HDAC6-233ENST00000489352 CSNK2A3Q8NEV1 391 aa8.94□□□□□ -0.98
HDAC6-233ENST00000489352 OR4C15Q8NGM1 316 aa8.94□□□□□ -0.98
HDAC6-233ENST00000489352 RASSF5Q8WWW0 418 aa8.94□□□□□ -0.98
HDAC6-233ENST00000489352 RNF170Q96K19 258 aa8.94□□□□□ -0.98
HDAC6-233ENST00000489352 ZNF714Q96N38 554 aa8.94□□□□□ -0.98
HDAC6-233ENST00000489352 POLR2J2Q9GZM3 115 aaKnown RBP8.94□□□□□ -0.98
HDAC6-233ENST00000489352 POLR2J3Q9H1A7 115 aaKnown RBP8.94□□□□□ -0.98
HDAC6-233ENST00000489352 TMEM133Q9H2Q1 129 aa8.94□□□□□ -0.98
HDAC6-233ENST00000489352 CCDC134Q9H6E4 229 aa8.94□□□□□ -0.98
HDAC6-233ENST00000489352 ACTR3BQ9P1U1 418 aa8.94□□□□□ -0.98
HDAC6-233ENST00000489352 DNAJB9Q9UBS3 223 aa8.94□□□□□ -0.98
HDAC6-233ENST00000489352 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.94□□□□□ -0.98
HDAC6-233ENST00000489352 SH3GLB1Q9Y371 365 aa8.94□□□□□ -0.98
HDAC6-233ENST00000489352 PSMD9O00233 223 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 SOCS2O14508 198 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 RRP9O43818 475 aaKnown RBP8.93□□□□□ -0.98
HDAC6-233ENST00000489352 SPAG7O75391 227 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 IGHG2P01859 326 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 TK1P04183 234 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 OR8U9P0C7N5 309 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 ZNF823P16415 610 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 CASQ1P31415 396 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 ISL1P61371 349 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 FAM3AP98173 230 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 PIN1Q13526 163 aaPredicted RBP8.93□□□□□ -0.98
HDAC6-233ENST00000489352 SMIM21Q3B7S5 101 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 TMEM65Q6PI78 240 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 SLC16A9Q7RTY1 509 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 PATL1Q86TB9 770 aaKnown RBP8.93□□□□□ -0.98
HDAC6-233ENST00000489352 ADCK1Q86TW2 530 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 GTSCR1Q86UQ5 136 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 CD177Q8N6Q3 437 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 C5orf56Q8N8D9 126 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 OR13C2Q8NGS9 318 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 ZNF596Q8TC21 504 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 CREB3L1Q96BA8 519 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 COPS4Q9BT78 406 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 RABEP2Q9H5N1 569 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 PPCSQ9HAB8 311 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 SRA1Q9HD15 236 aaKnown RBP8.93□□□□□ -0.98
HDAC6-233ENST00000489352 ABCB9Q9NP78 766 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 RASL12Q9NYN1 266 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 ZIM2Q9NZV7 527 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 HHLA2Q9UM44 414 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 RHBDD3Q9Y3P4 386 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 MPC1Q9Y5U8 109 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 SESN1Q9Y6P5 492 aa8.93□□□□□ -0.98
HDAC6-233ENST00000489352 UBR4Q5T4S7 5183 aa8.92□□□□□ -0.98
HDAC6-233ENST00000489352 MTRF1O75570 445 aaKnown RBP8.92□□□□□ -0.98
HDAC6-233ENST00000489352 SLC2A1P11166 492 aa8.92□□□□□ -0.98
HDAC6-233ENST00000489352 TMEM11P17152 192 aa8.92□□□□□ -0.98
HDAC6-233ENST00000489352 CFL1P23528 166 aaKnown RBP8.92□□□□□ -0.98
HDAC6-233ENST00000489352 GPR12P47775 334 aa8.92□□□□□ -0.98
HDAC6-233ENST00000489352 OR1E2P47887 323 aa8.92□□□□□ -0.98
HDAC6-233ENST00000489352 PRKXP51817 358 aa8.92□□□□□ -0.98
HDAC6-233ENST00000489352 CYP51A1Q16850 503 aa8.92□□□□□ -0.98
HDAC6-233ENST00000489352 GDPD3Q7L5L3 318 aa8.92□□□□□ -0.98
HDAC6-233ENST00000489352 ANKRD13BQ86YJ7 626 aa8.92□□□□□ -0.98
HDAC6-233ENST00000489352 TIGD4Q8IY51 512 aa8.92□□□□□ -0.98
HDAC6-233ENST00000489352 OR4P4Q8NGL7 312 aa8.92□□□□□ -0.98
HDAC6-233ENST00000489352 TRMT10AQ8TBZ6 339 aaKnown RBP8.92□□□□□ -0.98
HDAC6-233ENST00000489352 REEP6Q96HR9 211 aa8.92□□□□□ -0.98
HDAC6-233ENST00000489352 HRASLS5Q96KN8 279 aa8.92□□□□□ -0.98
HDAC6-233ENST00000489352 TSSK2Q96PF2 358 aa8.92□□□□□ -0.98
HDAC6-233ENST00000489352 NABP2Q9BQ15 211 aa8.92□□□□□ -0.98
HDAC6-233ENST00000489352 PNRC2Q9NPJ4 139 aaKnown RBP8.92□□□□□ -0.98
HDAC6-233ENST00000489352 SLC25A37Q9NYZ2 338 aa8.92□□□□□ -0.98
HDAC6-233ENST00000489352 CYB5R1Q9UHQ9 305 aa8.92□□□□□ -0.98
HDAC6-233ENST00000489352 CEPT1Q9Y6K0 416 aa8.92□□□□□ -0.98
HDAC6-233ENST00000489352 ARRDC5A6NEK1 342 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 ZNF850A8MQ14 1090 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 FGF16O43320 207 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 ANXA2P07355 339 aaKnown RBP8.91□□□□□ -0.98
HDAC6-233ENST00000489352 VDAC1P21796 283 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 SLC1A6P48664 564 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 GSK3AP49840 483 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 GPM6AP51674 278 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 PITPNAQ00169 270 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 ST3GAL3Q11203 375 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 PRDX4Q13162 271 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 EIF2B1Q14232 305 aaKnown RBP8.91□□□□□ -0.98
HDAC6-233ENST00000489352 GFOD2Q3B7J2 385 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 ZBED5Q49AG3 693 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 FAM122BQ7Z309 247 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 PGAM4Q8N0Y7 254 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 ABHD12Q8N2K0 398 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 RNF152Q8N8N0 203 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 ZNF454Q8N9F8 522 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 ASCC1Q8N9N2 400 aaKnown RBP8.91□□□□□ -0.98
HDAC6-233ENST00000489352 OR5P3Q8WZ94 311 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 PIGCQ92535 297 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 DLX4Q92988 240 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms