RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 DAPK2Q9UIK4 370 aa13.61□□□□□ -0.23
CLDN11-208ENST00000488989 FBXO9Q9UK97 447 aaPredicted RBP13.61□□□□□ -0.23
CLDN11-208ENST00000488989 TANC2Q9HCD6 1990 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 LOC100289279A0A1B0GTE1 492 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 LRP5LA4QPB2 252 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 C17orf100A8MU93 164 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 M0R233 179 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 IGHV1-46P01743 117 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 CALCBP10092 127 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 MPZP25189 248 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 CAPZA1P52907 286 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 RAB11BQ15907 218 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 ZNF404Q494X3 552 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 IDNKQ5T6J7 187 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 C11orf71Q6IPW1 123 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 ZNF573Q86YE8 665 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 PNLDC1Q8NA58 520 aaKnown RBP13.6□□□□□ -0.23
CLDN11-208ENST00000488989 ZSCAN4Q8NAM6 433 aaPredicted RBP13.6□□□□□ -0.23
CLDN11-208ENST00000488989 PXT1Q8NFP0 134 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 OR10AD1Q8NGE0 317 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 ELMOD3Q96FG2 381 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 C1orf147Q96MC9 270 aaPredicted RBP13.6□□□□□ -0.23
CLDN11-208ENST00000488989 PKIBQ9C010 78 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 TLNRD1Q9H1K6 362 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 CBLN4Q9NTU7 201 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 FAIMQ9NVQ4 179 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 C14orf119Q9NWQ9 140 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 NKIRAS2Q9NYR9 191 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 GHRLQ9UBU3 117 aa13.6□□□□□ -0.23
CLDN11-208ENST00000488989 F5H5P2 479 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 PTGFRP43088 359 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 GATA4P43694 442 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 OR3A4PP47883 348 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 PPOXP50336 477 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 ZNF154Q13106 437 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 PDZK1IP1Q13113 114 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 FAM209AQ5JX71 171 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 AGAP6Q5VW22 663 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 TMEM200AQ86VY9 491 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 ANGPTL5Q86XS5 388 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 CALHM1Q8IU99 346 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 SAXO1Q8IYX7 474 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 OR2Z1Q8NG97 314 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 MCFD2Q8NI22 146 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 RFT1Q96AA3 541 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 MEGF10Q96KG7 1140 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 GPER1Q99527 375 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 NKX3-1Q99801 234 aaPredicted RBP13.59□□□□□ -0.23
CLDN11-208ENST00000488989 MMP27Q9H306 513 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 MS4A5Q9H3V2 200 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 IL19Q9UHD0 177 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 SPATA2Q9UM82 520 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 DYSFO75923 2080 aa13.59□□□□□ -0.23
CLDN11-208ENST00000488989 J3QT63 122 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 LDLRAD4O15165 306 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 SPRY3O43610 288 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 BPNT1O95861 308 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 CD8AP01732 235 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 UBBP0CG47 229 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 TNFSF4P23510 183 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 HAAOP46952 286 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 CLDN12P56749 244 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 SNRPD2P62316 118 aaKnown RBP13.58□□□□□ -0.24
CLDN11-208ENST00000488989 C1QL2Q7Z5L3 287 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 C11orf53Q8IXP5 236 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 ZNF295-AS1Q8N0V1 137 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 TBC1D15Q8TC07 691 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 TNFAIP8L1Q8WVP5 186 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 FAM3DQ96BQ1 224 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 C14orf79Q96F83 325 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 TRAF4Q9BUZ4 470 aaPredicted RBP13.58□□□□□ -0.24
CLDN11-208ENST00000488989 PLEKHF2Q9H8W4 249 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 LIN7BQ9HAP6 207 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 IL36GQ9NZH8 169 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 FBLN5Q9UBX5 448 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 OR5V1Q9UGF6 321 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 MRPS28Q9Y2Q9 187 aaKnown RBP13.58□□□□□ -0.24
CLDN11-208ENST00000488989 ETV7Q9Y603 341 aa13.58□□□□□ -0.24
CLDN11-208ENST00000488989 A0A0B4J203 849 aa13.57□□□□□ -0.24
CLDN11-208ENST00000488989 CLPXO76031 633 aa13.57□□□□□ -0.24
CLDN11-208ENST00000488989 PAHP00439 452 aa13.57□□□□□ -0.24
CLDN11-208ENST00000488989 SOD3P08294 240 aa13.57□□□□□ -0.24
CLDN11-208ENST00000488989 ACAA1P09110 424 aaPredicted RBP13.57□□□□□ -0.24
CLDN11-208ENST00000488989 SNRPBP14678 240 aaKnown RBP13.57□□□□□ -0.24
CLDN11-208ENST00000488989 SRP9P49458 86 aaKnown RBP13.57□□□□□ -0.24
CLDN11-208ENST00000488989 QRFPP83859 136 aa13.57□□□□□ -0.24
CLDN11-208ENST00000488989 IL24Q13007 206 aa13.57□□□□□ -0.24
CLDN11-208ENST00000488989 PCGF3Q3KNV8 242 aa13.57□□□□□ -0.24
CLDN11-208ENST00000488989 C2orf76Q3KRA6 126 aa13.57□□□□□ -0.24
CLDN11-208ENST00000488989 AWAT2Q6E213 333 aa13.57□□□□□ -0.24
CLDN11-208ENST00000488989 MZT2AQ6P582 158 aa13.57□□□□□ -0.24
CLDN11-208ENST00000488989 GLIPR1L1Q6UWM5 242 aa13.57□□□□□ -0.24
CLDN11-208ENST00000488989 LINC00299Q6ZSB3 139 aa13.57□□□□□ -0.24
CLDN11-208ENST00000488989 SCCPDHQ8NBX0 429 aa13.57□□□□□ -0.24
CLDN11-208ENST00000488989 Q8NFD4 153 aa13.57□□□□□ -0.24
CLDN11-208ENST00000488989 OR51D1Q8NGF3 324 aa13.57□□□□□ -0.24
CLDN11-208ENST00000488989 OR5D18Q8NGL1 313 aa13.57□□□□□ -0.24
CLDN11-208ENST00000488989 LGALS14Q8TCE9 139 aa13.57□□□□□ -0.24
CLDN11-208ENST00000488989 AQP3Q92482 292 aa13.57□□□□□ -0.24
CLDN11-208ENST00000488989 CMTM3Q96MX0 182 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms