RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 A6NIN4 97 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 SLC22A31A6NKX4 558 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 LOC110117498-PIK3R3F6TDL0 507 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 SIGLEC5O15389 551 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 SRSF10O75494 262 aaKnown RBP9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 NRASP01111 189 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 IGLV3-1P01715 115 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 IGHV4-59P01825 116 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 TTRP02766 147 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 PSG2P11465 335 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 ATP6V1B1P15313 513 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 POLR2IP36954 125 aaKnown RBP9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 RASSF2P50749 326 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 RELBQ01201 579 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 PRR31Q5SQ13 230 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 NXNL2Q5VZ03 156 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 TMEM86BQ8N661 226 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 KIR3DL3Q8N743 410 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 Q8N7P7 452 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 ZNF671Q8TAW3 534 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 TBC1D15Q8TC07 691 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 AQP3Q92482 292 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 SEMA6AQ9H2E6 1030 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 ELL3Q9HB65 397 aaPredicted RBP9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 C1RLQ9NZP8 487 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 ENPP5Q9UJA9 477 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 FAM96BQ9Y3D0 163 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 POMT1Q9Y6A1 747 aa9.81□□□□□ -0.84
CCHCR1-215ENST00000488920 A0A1W2PQ09 198 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 OR5B21A6NL26 309 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 ZNF670-ZNF695F2Z2N8 137 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 RNASEK-C17orf49H0YIS7 233 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 MTRF1O75570 445 aaKnown RBP9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 DHRS3O75911 302 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 ATP5HO75947 161 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 RPP14O95059 124 aaKnown RBP9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 IER3P46695 156 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 RAG2P55895 527 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 ACTR3P61158 418 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 SRSF4Q08170 494 aaKnown RBP9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 KLRD1Q13241 179 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 ZNF684Q5T5D7 378 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 BCL2L15Q5TBC7 163 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 ZBTB37Q5TC79 503 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 ELMOD2Q8IZ81 293 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 PNKDQ8N490 385 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 ZNRF1Q8ND25 227 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 OR51G2Q8NGK0 314 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 OR4F5Q8NH21 305 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 C8orf46Q8TAG6 207 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 ITFG2Q969R8 447 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 DUS3LQ96G46 650 aaKnown RBP9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 DMRTB1Q96MA1 342 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 ZNF488Q96MN9 340 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 MNTQ99583 582 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 TBX5Q99593 518 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 CIB1Q99828 191 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 GABARAPL1Q9H0R8 117 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 ZNF696Q9H7X3 374 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 BEX1Q9HBH7 125 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 GPR173Q9NS66 373 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 CLN6Q9NWW5 311 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 MRM2Q9UI43 246 aaKnown RBP9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 OR52A1Q9UKL2 312 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 SLC22A13Q9Y226 551 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 MAB21L2Q9Y586 359 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 MMP24Q9Y5R2 645 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 R4GMQ9 66 aa9.8□□□□□ -0.84
CCHCR1-215ENST00000488920 A0A1B0GTI1 187 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 NPFFO15130 113 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 SYNGR1O43759 233 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 GPR137BO60478 399 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 APOL3O95236 402 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 KNG1P01042 644 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 FCGR1AP12314 374 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 EEF1B2P24534 225 aaKnown RBP9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 CAV3P56539 151 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 EGR3Q06889 387 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 ODF4Q2M2E3 257 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 CLVS2Q5SYC1 327 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 METAP1DQ6UB28 335 aaPredicted RBP9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 ASRGL1Q7L266 308 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 SSX6Q7RTT6 188 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 GID4Q8IVV7 300 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 YIPF7Q8N8F6 280 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 TMEM185AQ8NFB2 350 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 DYRK2Q92630 601 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 TNFRSF14Q92956 283 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 SLITRK2Q9H156 845 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 RIBC2Q9H4K1 309 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 RASL12Q9NYN1 266 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 ZNF222Q9UK12 451 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 SNX5Q9Y5X3 404 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 V9GYS6 101 aa9.79□□□□□ -0.84
CCHCR1-215ENST00000488920 A0A1B0GUS0 222 aa9.78□□□□□ -0.84
CCHCR1-215ENST00000488920 A0A1W2PQL4 384 aaPredicted RBP9.78□□□□□ -0.84
CCHCR1-215ENST00000488920 PQLC2LA1A4F0 135 aa9.78□□□□□ -0.84
CCHCR1-215ENST00000488920 SAC3D1A6NKF1 404 aa9.78□□□□□ -0.84
CCHCR1-215ENST00000488920 RFPL4AA6NLU0 287 aa9.78□□□□□ -0.84
CCHCR1-215ENST00000488920 RFPL4AL1F8VTS6 287 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms