RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 LAMP5Q9UJQ1 280 aa15.01□□□□□ -0.01
HDAC6-231ENST00000488905 OR5B21A6NL26 309 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 ALOX5APP20292 161 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 SLC2A5P22732 501 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 EFNB2P52799 333 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 GYS2P54840 703 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 LY6EQ16553 131 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 LRRC75BQ2VPJ9 315 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 TRPM8Q7Z2W7 1104 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 THAP5Q7Z6K1 395 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 TMEM179BQ7Z7N9 219 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 COMMD2Q86X83 199 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 OR4C13Q8NGP0 309 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 PPP1R35Q8TAP8 253 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 AQP3Q92482 292 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 RORBQ92753 470 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 SDSLQ96GA7 329 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 AJUBAQ96IF1 538 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 LRGUKQ96M69 825 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 CHID1Q9BWS9 393 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 FAM234AQ9H0X4 552 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 C19orf12Q9NSK7 152 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 SIGLEC9Q9Y336 463 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 NOTCH3Q9UM47 2321 aa15□□□□□ -0.01
HDAC6-231ENST00000488905 HMGN1P05114 100 aa14.99□□□□□ -0.01
HDAC6-231ENST00000488905 OSMP13725 252 aa14.99□□□□□ -0.01
HDAC6-231ENST00000488905 CAPZA1P52907 286 aa14.99□□□□□ -0.01
HDAC6-231ENST00000488905 DMRTC1Q5HYR2 192 aa14.99□□□□□ -0.01
HDAC6-231ENST00000488905 PLCXD3Q63HM9 321 aa14.99□□□□□ -0.01
HDAC6-231ENST00000488905 C11orf88Q6PI97 169 aa14.99□□□□□ -0.01
HDAC6-231ENST00000488905 HAGHLQ6PII5 290 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-231ENST00000488905 ADGRG5Q8IZF4 528 aa14.99□□□□□ -0.01
HDAC6-231ENST00000488905 OR5A2Q8NGI9 324 aa14.99□□□□□ -0.01
HDAC6-231ENST00000488905 ZNF671Q8TAW3 534 aa14.99□□□□□ -0.01
HDAC6-231ENST00000488905 MEGF9Q9H1U4 602 aa14.99□□□□□ -0.01
HDAC6-231ENST00000488905 RANBP3Q9H6Z4 567 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-231ENST00000488905 YY1AP1Q9H869 796 aa14.99□□□□□ -0.01
HDAC6-231ENST00000488905 RAB18Q9NP72 206 aa14.99□□□□□ -0.01
HDAC6-231ENST00000488905 TMEM269A0A1B0GVZ9 245 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 ACOD1A6NK06 481 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 PSMD9O00233 223 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 MTRF1O75570 445 aaKnown RBP14.98□□□□□ -0.01
HDAC6-231ENST00000488905 IGLV3-1P01715 115 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 ATP6V1B1P15313 513 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 FAHP16930 419 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 KIR2DS4P43632 304 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 CDK5Q00535 292 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 AANATQ16613 207 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 SMIM21Q3B7S5 101 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 KCTD18Q6PI47 426 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-231ENST00000488905 CRIP3Q6Q6R5 217 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 DEGS2Q6QHC5 323 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 ACP7Q6ZNF0 438 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 MKXQ8IYA7 352 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 KLHDC1Q8N7A1 406 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 POC1AQ8NBT0 407 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 OR5K1Q8NHB7 308 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 ITFG2Q969R8 447 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 NSL1Q96IY1 281 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 YIPF3Q9GZM5 350 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 PBOV1Q9GZY1 135 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 ZNF556Q9HAH1 456 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 GPR84Q9NQS5 396 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 RASL12Q9NYN1 266 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 FOXJ3Q9UPW0 622 aa14.98□□□□□ -0.01
HDAC6-231ENST00000488905 GNGT2O14610 69 aa14.97□□□□□ -0.01
HDAC6-231ENST00000488905 OPN1MWP04001 364 aa14.97□□□□□ -0.01
HDAC6-231ENST00000488905 OPN1MW2P0DN77 364 aa14.97□□□□□ -0.01
HDAC6-231ENST00000488905 OPN1MW3P0DN78 364 aa14.97□□□□□ -0.01
HDAC6-231ENST00000488905 CALB2P22676 271 aa14.97□□□□□ -0.01
HDAC6-231ENST00000488905 PAX6P26367 422 aa14.97□□□□□ -0.01
HDAC6-231ENST00000488905 HCCSP53701 268 aa14.97□□□□□ -0.01
HDAC6-231ENST00000488905 RPL31P62899 125 aaKnown RBP14.97□□□□□ -0.01
HDAC6-231ENST00000488905 RIPPLY1Q0D2K3 151 aa14.97□□□□□ -0.01
HDAC6-231ENST00000488905 APOFQ13790 326 aa14.97□□□□□ -0.01
HDAC6-231ENST00000488905 ZBTB37Q5TC79 503 aa14.97□□□□□ -0.01
HDAC6-231ENST00000488905 MOB3CQ70IA8 216 aa14.97□□□□□ -0.01
HDAC6-231ENST00000488905 HS3ST5Q8IZT8 346 aa14.97□□□□□ -0.01
HDAC6-231ENST00000488905 OR2T6Q8NHC8 308 aa14.97□□□□□ -0.01
HDAC6-231ENST00000488905 OR51E1Q8TCB6 317 aa14.97□□□□□ -0.01
HDAC6-231ENST00000488905 CFHR4Q92496 578 aa14.97□□□□□ -0.01
HDAC6-231ENST00000488905 CLPTM1LQ96KA5 538 aa14.97□□□□□ -0.01
HDAC6-231ENST00000488905 MROQ9BYG7 248 aa14.97□□□□□ -0.01
HDAC6-231ENST00000488905 SLC25A19Q9HC21 320 aa14.97□□□□□ -0.01
HDAC6-231ENST00000488905 PIGLQ9Y2B2 252 aa14.97□□□□□ -0.01
HDAC6-231ENST00000488905 A0A1W2PPH5 198 aa14.96□□□□□ -0.01
HDAC6-231ENST00000488905 RFPL4AA6NLU0 287 aa14.96□□□□□ -0.01
HDAC6-231ENST00000488905 PRR32B1ATL7 298 aa14.96□□□□□ -0.01
HDAC6-231ENST00000488905 RFPL4AL1F8VTS6 287 aa14.96□□□□□ -0.01
HDAC6-231ENST00000488905 G3V4G9 280 aa14.96□□□□□ -0.01
HDAC6-231ENST00000488905 SLC1A7O00341 560 aa14.96□□□□□ -0.01
HDAC6-231ENST00000488905 E2F6O75461 281 aa14.96□□□□□ -0.01
HDAC6-231ENST00000488905 MRPL3P09001 348 aaKnown RBP14.96□□□□□ -0.01
HDAC6-231ENST00000488905 PGA5P0DJD9 388 aa14.96□□□□□ -0.01
HDAC6-231ENST00000488905 BMXP51813 675 aa14.96□□□□□ -0.01
HDAC6-231ENST00000488905 BEAN1Q3B7T3 259 aa14.96□□□□□ -0.01
HDAC6-231ENST00000488905 ZNF829Q3KNS6 432 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-231ENST00000488905 HIST2H2BDQ6DRA6 164 aa14.96□□□□□ -0.01
HDAC6-231ENST00000488905 LIAT1Q6ZQX7 453 aa14.96□□□□□ -0.01
HDAC6-231ENST00000488905 ZNF561Q8N587 486 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms