RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 SYT7O43581 403 aa13.22□□□□□ -0.29
CTDSP1-209ENST00000488627 IGHA1P01876 353 aa13.22□□□□□ -0.29
CTDSP1-209ENST00000488627 PEX2P28328 305 aa13.22□□□□□ -0.29
CTDSP1-209ENST00000488627 GMFBP60983 142 aa13.22□□□□□ -0.29
CTDSP1-209ENST00000488627 GALEQ14376 348 aa13.22□□□□□ -0.29
CTDSP1-209ENST00000488627 BTNL3Q6UXE8 466 aa13.22□□□□□ -0.29
CTDSP1-209ENST00000488627 USP43Q70EL4 1123 aa13.22□□□□□ -0.29
CTDSP1-209ENST00000488627 FGFRL1Q8N441 504 aa13.22□□□□□ -0.29
CTDSP1-209ENST00000488627 ANGPTL6Q8NI99 470 aa13.22□□□□□ -0.29
CTDSP1-209ENST00000488627 UPRTQ96BW1 309 aa13.22□□□□□ -0.29
CTDSP1-209ENST00000488627 PELI1Q96FA3 418 aa13.22□□□□□ -0.29
CTDSP1-209ENST00000488627 TECTBQ96PL2 329 aa13.22□□□□□ -0.29
CTDSP1-209ENST00000488627 MRI1Q9BV20 369 aa13.22□□□□□ -0.29
CTDSP1-209ENST00000488627 A0A1B0GVI7 797 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 H3BSH0 61 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 ENSAO43768 121 aaKnown RBP13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 CLIC3O95833 236 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 TFF1P04155 84 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 ADARB1P78563 741 aaKnown RBP13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 RAB40BQ12829 278 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 SCGB2A2Q13296 93 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 UBE2V2Q15819 145 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 SMN1Q16637 294 aaKnown RBP13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 C11orf91Q3C1V1 193 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 CD276Q5ZPR3 534 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 HAGHLQ6PII5 290 aaPredicted RBP13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 FAM220AQ7Z4H9 259 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 LHFPL3Q86UP9 236 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 EGFL6Q8IUX8 553 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 PACRGLQ8N7B6 248 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 FAM216BQ8N7L0 139 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 CCDC54Q8NEL0 328 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 OR52I1Q8NGK6 324 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 ZNF671Q8TAW3 534 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 C4orf36Q96KX1 117 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 ISG20L2Q9H9L3 353 aaKnown RBP13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 C8orf4Q9NR00 106 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 SNTG1Q9NSN8 517 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 ZNF69Q9UC07 566 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 NUP50Q9UKX7 468 aa13.21□□□□□ -0.29
CTDSP1-209ENST00000488627 LOC107986453A0A1B0GWG9 222 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 ANKRD61A6NGH8 418 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 J3QLW9 94 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 CASQ2O14958 399 aaPredicted RBP13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 SYNGR1O43759 233 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 NOS1APO75052 506 aaPredicted RBP13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 RGS9O75916 674 aaPredicted RBP13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 FADS2O95864 444 aaKnown RBP13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 ISG15P05161 165 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 LIPFP07098 398 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 IGHV4-38-2P0DP08 117 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 SELLP14151 372 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 ZNF19P17023 458 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 CCR9P51686 369 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 FGF12P61328 243 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 ZNF691Q5VV52 312 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 ZNF788Q6ZQV5 615 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 BTN2A1Q7KYR7 527 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 ZNF573Q86YE8 665 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 BCL6BQ8N143 479 aaPredicted RBP13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 ZNF555Q8NEP9 628 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 C22orf15Q8WYQ4 148 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 SLC6A7Q99884 636 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 DNTTIP1Q9H147 329 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 ERVK13-1Q9NX77 482 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 NLKQ9UBE8 527 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 DNAJB11Q9UBS4 358 aa13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 RPL36Q9Y3U8 105 aaKnown RBP13.2□□□□□ -0.3
CTDSP1-209ENST00000488627 IGKV1D-17A0A075B6S4 117 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 OR4C45A6NMZ5 311 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 OR2AT4A6NND4 320 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 PLATP00750 562 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 UBCP0CG48 685 aaKnown RBP13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 PSG2P11465 335 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 MMP9P14780 707 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 GLRA1P23415 457 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 MPZP25189 248 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 HAAOP46952 286 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 HILS1P60008 231 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 ACTA2P62736 377 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 ACTG2P63267 376 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 DGUOKQ16854 277 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 ARMCX4Q5H9R4 360 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 OGFRL1Q5TC84 451 aaPredicted RBP13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 TMEM244Q5VVB8 128 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 SLC36A1Q7Z2H8 476 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 SYS1Q8N2H4 156 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 POC1AQ8NBT0 407 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 LY6G5BQ8NDX9 201 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 CNIH3Q8TBE1 160 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 ZNF418Q8TF45 676 aaPredicted RBP13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 C10orf35Q96D05 121 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 ADAT3Q96EY9 351 aaPredicted RBP13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 GAFA1Q96PS6 74 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 ADI1Q9BV57 179 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 ALG8Q9BVK2 526 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 C19orf24Q9BVV8 132 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 JAM3Q9BX67 310 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 CHST5Q9GZS9 411 aa13.19□□□□□ -0.3
CTDSP1-209ENST00000488627 FGF20Q9NP95 211 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms