RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 BRD3OSQ6XYD6 125 aa16.91■□□□□ 0.3
HDAC4-209ENST00000487617 FAM220AQ7Z4H9 259 aa16.91■□□□□ 0.3
HDAC4-209ENST00000487617 AQP3Q92482 292 aa16.91■□□□□ 0.3
HDAC4-209ENST00000487617 RORBQ92753 470 aa16.91■□□□□ 0.3
HDAC4-209ENST00000487617 GCDHQ92947 438 aaPredicted RBP16.91■□□□□ 0.3
HDAC4-209ENST00000487617 RNFT2Q96EX2 444 aa16.91■□□□□ 0.3
HDAC4-209ENST00000487617 WDFY2Q96P53 400 aa16.91■□□□□ 0.3
HDAC4-209ENST00000487617 MBOAT4Q96T53 435 aa16.91■□□□□ 0.3
HDAC4-209ENST00000487617 DNTTIP1Q9H147 329 aa16.91■□□□□ 0.3
HDAC4-209ENST00000487617 NLKQ9UBE8 527 aa16.91■□□□□ 0.3
HDAC4-209ENST00000487617 RPUSD1Q9UJJ7 312 aaKnown RBP16.91■□□□□ 0.3
HDAC4-209ENST00000487617 GNG8Q9UK08 70 aa16.91■□□□□ 0.3
HDAC4-209ENST00000487617 GMPPBQ9Y5P6 360 aa16.91■□□□□ 0.3
HDAC4-209ENST00000487617 A0A1B0GVI7 797 aa16.9■□□□□ 0.3
HDAC4-209ENST00000487617 A6NIN4 97 aa16.9■□□□□ 0.3
HDAC4-209ENST00000487617 DHRS7CA6NNS2 312 aa16.9■□□□□ 0.3
HDAC4-209ENST00000487617 E9PQ18 207 aa16.9■□□□□ 0.3
HDAC4-209ENST00000487617 DLGAP1O14490 977 aa16.9■□□□□ 0.3
HDAC4-209ENST00000487617 MMP9P14780 707 aa16.9■□□□□ 0.3
HDAC4-209ENST00000487617 ARF6P62330 175 aa16.9■□□□□ 0.3
HDAC4-209ENST00000487617 ZNF85Q03923 595 aa16.9■□□□□ 0.3
HDAC4-209ENST00000487617 OCLNQ16625 522 aa16.9■□□□□ 0.3
HDAC4-209ENST00000487617 TP53I3Q53FA7 332 aa16.9■□□□□ 0.3
HDAC4-209ENST00000487617 SLC25A30Q5SVS4 291 aa16.9■□□□□ 0.3
HDAC4-209ENST00000487617 TMEM42Q69YG0 159 aa16.9■□□□□ 0.3
HDAC4-209ENST00000487617 ZBTB49Q6ZSB9 765 aa16.9■□□□□ 0.3
HDAC4-209ENST00000487617 Q6ZSR3 168 aa16.9■□□□□ 0.3
HDAC4-209ENST00000487617 PQLC1Q8N2U9 271 aa16.9■□□□□ 0.3
HDAC4-209ENST00000487617 ANGPTL6Q8NI99 470 aa16.9■□□□□ 0.3
HDAC4-209ENST00000487617 TMIGD2Q96BF3 282 aa16.9■□□□□ 0.3
HDAC4-209ENST00000487617 DUX5Q96PT3 197 aa16.9■□□□□ 0.3
HDAC4-209ENST00000487617 TBX15Q96SF7 602 aa16.9■□□□□ 0.3
HDAC4-209ENST00000487617 CNTD2Q9H8S5 307 aa16.9■□□□□ 0.3
HDAC4-209ENST00000487617 DNAJC9-AS1A6NH13 148 aa16.89■□□□□ 0.29
HDAC4-209ENST00000487617 OR2AT4A6NND4 320 aa16.89■□□□□ 0.29
HDAC4-209ENST00000487617 H3BSH0 61 aa16.89■□□□□ 0.29
HDAC4-209ENST00000487617 HAX1O00165 279 aa16.89■□□□□ 0.29
HDAC4-209ENST00000487617 GPR37O15354 613 aa16.89■□□□□ 0.29
HDAC4-209ENST00000487617 SYT7O43581 403 aa16.89■□□□□ 0.29
HDAC4-209ENST00000487617 TFF1P04155 84 aa16.89■□□□□ 0.29
HDAC4-209ENST00000487617 SELLP14151 372 aa16.89■□□□□ 0.29
HDAC4-209ENST00000487617 CCL1P22362 96 aa16.89■□□□□ 0.29
HDAC4-209ENST00000487617 GABRA2P47869 451 aa16.89■□□□□ 0.29
HDAC4-209ENST00000487617 IL13RA1P78552 427 aa16.89■□□□□ 0.29
HDAC4-209ENST00000487617 ZNF788Q6ZQV5 615 aa16.89■□□□□ 0.29
HDAC4-209ENST00000487617 ZNF573Q86YE8 665 aa16.89■□□□□ 0.29
HDAC4-209ENST00000487617 MED30Q96HR3 178 aa16.89■□□□□ 0.29
HDAC4-209ENST00000487617 GAFA1Q96PS6 74 aa16.89■□□□□ 0.29
HDAC4-209ENST00000487617 SLC29A1Q99808 456 aa16.89■□□□□ 0.29
HDAC4-209ENST00000487617 ADI1Q9BV57 179 aa16.89■□□□□ 0.29
HDAC4-209ENST00000487617 SIRPDQ9H106 197 aa16.89■□□□□ 0.29
HDAC4-209ENST00000487617 PLEKHA1Q9HB21 404 aa16.89■□□□□ 0.29
HDAC4-209ENST00000487617 ACOXLQ9NUZ1 547 aa16.89■□□□□ 0.29
HDAC4-209ENST00000487617 AASSQ9UDR5 926 aa16.89■□□□□ 0.29
HDAC4-209ENST00000487617 DAPL1A0PJW8 107 aa16.88■□□□□ 0.29
HDAC4-209ENST00000487617 SNTNA6NMZ2 147 aa16.88■□□□□ 0.29
HDAC4-209ENST00000487617 BAG2O95816 211 aa16.88■□□□□ 0.29
HDAC4-209ENST00000487617 PRTN3P24158 256 aa16.88■□□□□ 0.29
HDAC4-209ENST00000487617 HAAOP46952 286 aa16.88■□□□□ 0.29
HDAC4-209ENST00000487617 BPIFB3P59826 476 aa16.88■□□□□ 0.29
HDAC4-209ENST00000487617 ACTC1P68032 377 aa16.88■□□□□ 0.29
HDAC4-209ENST00000487617 ACTA1P68133 377 aa16.88■□□□□ 0.29
HDAC4-209ENST00000487617 PDCD1Q15116 288 aa16.88■□□□□ 0.29
HDAC4-209ENST00000487617 PRSS35Q8N3Z0 413 aa16.88■□□□□ 0.29
HDAC4-209ENST00000487617 H1FXQ92522 213 aaKnown RBP16.88■□□□□ 0.29
HDAC4-209ENST00000487617 ONECUT1Q9UBC0 465 aa16.88■□□□□ 0.29
HDAC4-209ENST00000487617 MDFIC2A0A1B0GVS7 189 aa16.87■□□□□ 0.29
HDAC4-209ENST00000487617 PQLC2LA1A4F0 135 aa16.87■□□□□ 0.29
HDAC4-209ENST00000487617 TMEM89A2RUT3 159 aa16.87■□□□□ 0.29
HDAC4-209ENST00000487617 ANKRD61A6NGH8 418 aa16.87■□□□□ 0.29
HDAC4-209ENST00000487617 J3QT63 122 aa16.87■□□□□ 0.29
HDAC4-209ENST00000487617 SIGLEC5O15389 551 aa16.87■□□□□ 0.29
HDAC4-209ENST00000487617 SYNGR1O43759 233 aa16.87■□□□□ 0.29
HDAC4-209ENST00000487617 ACAA1P09110 424 aaPredicted RBP16.87■□□□□ 0.29
HDAC4-209ENST00000487617 ISL1P61371 349 aa16.87■□□□□ 0.29
HDAC4-209ENST00000487617 DGUOKQ16854 277 aa16.87■□□□□ 0.29
HDAC4-209ENST00000487617 RUSC1-AS1Q66K80 236 aa16.87■□□□□ 0.29
HDAC4-209ENST00000487617 POC1AQ8NBT0 407 aa16.87■□□□□ 0.29
HDAC4-209ENST00000487617 LY6G5BQ8NDX9 201 aa16.87■□□□□ 0.29
HDAC4-209ENST00000487617 C1orf147Q96MC9 270 aaPredicted RBP16.87■□□□□ 0.29
HDAC4-209ENST00000487617 ZMAT3Q9HA38 289 aaKnown RBP16.87■□□□□ 0.29
HDAC4-209ENST00000487617 RASL12Q9NYN1 266 aa16.87■□□□□ 0.29
HDAC4-209ENST00000487617 SLC25A10Q9UBX3 287 aaPredicted RBP16.87■□□□□ 0.29
HDAC4-209ENST00000487617 KPTNQ9Y664 436 aa16.87■□□□□ 0.29
HDAC4-209ENST00000487617 IGKV1D-17A0A075B6S4 117 aa16.86■□□□□ 0.29
HDAC4-209ENST00000487617 CENPVL3A0A0U1RRI6 287 aa16.86■□□□□ 0.29
HDAC4-209ENST00000487617 J3QRE1 110 aa16.86■□□□□ 0.29
HDAC4-209ENST00000487617 PSG2P11465 335 aa16.86■□□□□ 0.29
HDAC4-209ENST00000487617 NDUFB7P17568 137 aa16.86■□□□□ 0.29
HDAC4-209ENST00000487617 KIR3DL2P43630 455 aa16.86■□□□□ 0.29
HDAC4-209ENST00000487617 DEFB112Q30KQ8 113 aa16.86■□□□□ 0.29
HDAC4-209ENST00000487617 CDONQ4KMG0 1287 aa16.86■□□□□ 0.29
HDAC4-209ENST00000487617 KCTD20Q7Z5Y7 419 aa16.86■□□□□ 0.29
HDAC4-209ENST00000487617 ACBD7Q8N6N7 88 aa16.86■□□□□ 0.29
HDAC4-209ENST00000487617 CCDC54Q8NEL0 328 aa16.86■□□□□ 0.29
HDAC4-209ENST00000487617 TRMT10AQ8TBZ6 339 aaKnown RBP16.86■□□□□ 0.29
HDAC4-209ENST00000487617 STMN2Q93045 179 aa16.86■□□□□ 0.29
HDAC4-209ENST00000487617 LHX4Q969G2 390 aa16.86■□□□□ 0.29
HDAC4-209ENST00000487617 ZDHHC16Q969W1 377 aa16.86■□□□□ 0.29
HDAC4-209ENST00000487617 ZNF488Q96MN9 340 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms