RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 ZDHHC23Q8IYP9 409 aa12.31□□□□□ -0.44
MCF2L-228ENST00000487354 OR5AU1Q8NGC0 362 aa12.31□□□□□ -0.44
MCF2L-228ENST00000487354 OR4M1Q8NGD0 313 aa12.31□□□□□ -0.44
MCF2L-228ENST00000487354 OR6K6Q8NGW6 343 aa12.31□□□□□ -0.44
MCF2L-228ENST00000487354 AQP3Q92482 292 aa12.31□□□□□ -0.44
MCF2L-228ENST00000487354 PIGCQ92535 297 aa12.31□□□□□ -0.44
MCF2L-228ENST00000487354 RCC1LQ96I51 464 aaKnown RBP12.31□□□□□ -0.44
MCF2L-228ENST00000487354 ABCB9Q9NP78 766 aa12.31□□□□□ -0.44
MCF2L-228ENST00000487354 USE1Q9NZ43 259 aa12.31□□□□□ -0.44
MCF2L-228ENST00000487354 C17orf98A8MV24 154 aa12.3□□□□□ -0.44
MCF2L-228ENST00000487354 DYNLT3P51808 116 aa12.3□□□□□ -0.44
MCF2L-228ENST00000487354 SMIM11AP58511 58 aa12.3□□□□□ -0.44
MCF2L-228ENST00000487354 COL10A1Q03692 680 aa12.3□□□□□ -0.44
MCF2L-228ENST00000487354 CD69Q07108 199 aa12.3□□□□□ -0.44
MCF2L-228ENST00000487354 ZNF626Q68DY1 528 aa12.3□□□□□ -0.44
MCF2L-228ENST00000487354 C10orf99Q6UWK7 81 aa12.3□□□□□ -0.44
MCF2L-228ENST00000487354 ACP7Q6ZNF0 438 aa12.3□□□□□ -0.44
MCF2L-228ENST00000487354 FTMTQ8N4E7 242 aa12.3□□□□□ -0.44
MCF2L-228ENST00000487354 OR52L1Q8NGH7 329 aa12.3□□□□□ -0.44
MCF2L-228ENST00000487354 RPS4Y2Q8TD47 263 aa12.3□□□□□ -0.44
MCF2L-228ENST00000487354 PGAM5Q96HS1 289 aa12.3□□□□□ -0.44
MCF2L-228ENST00000487354 PYURFQ96I23 114 aa12.3□□□□□ -0.44
MCF2L-228ENST00000487354 ZNF488Q96MN9 340 aa12.3□□□□□ -0.44
MCF2L-228ENST00000487354 TBL2Q9Y4P3 447 aaKnown RBP12.3□□□□□ -0.44
MCF2L-228ENST00000487354 RFPL4AA6NLU0 287 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 ZNF732B4DXR9 585 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 RFPL4AL1F8VTS6 287 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 PF4V1P10720 104 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 NUDT2P50583 147 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 LGALS4P56470 323 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 PSME3P61289 254 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 SNCBQ16143 134 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 SSX2Q16385 188 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 RPL13AP3Q6NVV1 102 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 ETV3LQ6ZN32 361 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 CCDC121Q6ZUS5 278 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 TCF23Q7RTU1 214 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 TIGD4Q8IY51 512 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 RNF148Q8N7C7 305 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 LINC00482Q8N8I6 264 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 OR11H6Q8NGC7 330 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 OR8B12Q8NGG6 310 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 OR6N2Q8NGY6 317 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 FOXRED1Q96CU9 486 aaPredicted RBP12.29□□□□□ -0.44
MCF2L-228ENST00000487354 GORASP2Q9H8Y8 452 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 MED20Q9H944 212 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 LYVE1Q9Y5Y7 322 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 TENM2Q9NT68 2774 aa12.29□□□□□ -0.44
MCF2L-228ENST00000487354 FAM90A22PA8MWA6 464 aa12.28□□□□□ -0.44
MCF2L-228ENST00000487354 GLCEO94923 617 aa12.28□□□□□ -0.44
MCF2L-228ENST00000487354 APOC1P02654 83 aa12.28□□□□□ -0.44
MCF2L-228ENST00000487354 ARG1P05089 322 aa12.28□□□□□ -0.44
MCF2L-228ENST00000487354 PAICSP22234 425 aaKnown RBP12.28□□□□□ -0.44
MCF2L-228ENST00000487354 IFNGR2P38484 337 aa12.28□□□□□ -0.44
MCF2L-228ENST00000487354 CAPZA1P52907 286 aa12.28□□□□□ -0.44
MCF2L-228ENST00000487354 GNG3P63215 75 aa12.28□□□□□ -0.44
MCF2L-228ENST00000487354 CEP78Q5JTW2 689 aa12.28□□□□□ -0.44
MCF2L-228ENST00000487354 RASSF6Q6ZTQ3 369 aa12.28□□□□□ -0.44
MCF2L-228ENST00000487354 ERI1Q8IV48 349 aaKnown RBP12.28□□□□□ -0.44
MCF2L-228ENST00000487354 POC1AQ8NBT0 407 aa12.28□□□□□ -0.44
MCF2L-228ENST00000487354 MYDGFQ969H8 173 aa12.28□□□□□ -0.44
MCF2L-228ENST00000487354 MALSU1Q96EH3 234 aa12.28□□□□□ -0.44
MCF2L-228ENST00000487354 INTS14Q96SY0 518 aa12.28□□□□□ -0.44
MCF2L-228ENST00000487354 EFCAB1Q9HAE3 211 aa12.28□□□□□ -0.44
MCF2L-228ENST00000487354 ARMC1Q9NVT9 282 aa12.28□□□□□ -0.44
MCF2L-228ENST00000487354 KLHDC2Q9Y2U9 406 aa12.28□□□□□ -0.44
MCF2L-228ENST00000487354 DNAH1Q9P2D7 4330 aa12.28□□□□□ -0.44
MCF2L-228ENST00000487354 PEX14O75381 377 aa12.27□□□□□ -0.45
MCF2L-228ENST00000487354 GASTP01350 101 aa12.27□□□□□ -0.45
MCF2L-228ENST00000487354 PF4P02776 101 aa12.27□□□□□ -0.45
MCF2L-228ENST00000487354 HMGA2P52926 109 aa12.27□□□□□ -0.45
MCF2L-228ENST00000487354 CEACAM21Q3KPI0 293 aa12.27□□□□□ -0.45
MCF2L-228ENST00000487354 HAGHLQ6PII5 290 aaPredicted RBP12.27□□□□□ -0.45
MCF2L-228ENST00000487354 CPLX4Q7Z7G2 160 aa12.27□□□□□ -0.45
MCF2L-228ENST00000487354 ZNF561Q8N587 486 aa12.27□□□□□ -0.45
MCF2L-228ENST00000487354 OR2T27Q8NH04 317 aa12.27□□□□□ -0.45
MCF2L-228ENST00000487354 OR8B4Q96RC9 309 aa12.27□□□□□ -0.45
MCF2L-228ENST00000487354 TSSK6Q9BXA6 273 aa12.27□□□□□ -0.45
MCF2L-228ENST00000487354 IL1RAPQ9NPH3 570 aa12.27□□□□□ -0.45
MCF2L-228ENST00000487354 ABCB10Q9NRK6 738 aa12.27□□□□□ -0.45
MCF2L-228ENST00000487354 TBC1D23Q9NUY8 699 aa12.27□□□□□ -0.45
MCF2L-228ENST00000487354 RASL12Q9NYN1 266 aa12.27□□□□□ -0.45
MCF2L-228ENST00000487354 PITPNC1Q9UKF7 332 aa12.27□□□□□ -0.45
MCF2L-228ENST00000487354 TSSC4Q9Y5U2 329 aaPredicted RBP12.27□□□□□ -0.45
MCF2L-228ENST00000487354 LYSTQ99698 3801 aa12.27□□□□□ -0.45
MCF2L-228ENST00000487354 MEX3AA1L020 520 aaKnown RBP12.26□□□□□ -0.45
MCF2L-228ENST00000487354 FAM183AA6NL82 134 aa12.26□□□□□ -0.45
MCF2L-228ENST00000487354 NDUFAB1O14561 156 aa12.26□□□□□ -0.45
MCF2L-228ENST00000487354 SOX14O95416 240 aa12.26□□□□□ -0.45
MCF2L-228ENST00000487354 DUS4LO95620 317 aaKnown RBP12.26□□□□□ -0.45
MCF2L-228ENST00000487354 FABP3P05413 133 aa12.26□□□□□ -0.45
MCF2L-228ENST00000487354 PGA5P0DJD9 388 aa12.26□□□□□ -0.45
MCF2L-228ENST00000487354 PIPP12273 146 aaPredicted RBP12.26□□□□□ -0.45
MCF2L-228ENST00000487354 PRDX2P32119 198 aa12.26□□□□□ -0.45
MCF2L-228ENST00000487354 BLVRAP53004 296 aa12.26□□□□□ -0.45
MCF2L-228ENST00000487354 PSMA6P60900 246 aaKnown RBP12.26□□□□□ -0.45
MCF2L-228ENST00000487354 TRPM8Q7Z2W7 1104 aa12.26□□□□□ -0.45
MCF2L-228ENST00000487354 CALHM1Q8IU99 346 aa12.26□□□□□ -0.45
MCF2L-228ENST00000487354 HES4Q9HCC6 221 aa12.26□□□□□ -0.45
MCF2L-228ENST00000487354 SPAG4Q9NPE6 437 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms