RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 CAPZA1P52907 286 aa15.73■□□□□ 0.11
SMPDL3A-202ENST00000487215 VAX1Q5SQQ9 334 aa15.73■□□□□ 0.11
SMPDL3A-202ENST00000487215 FOXB2Q5VYV0 432 aa15.73■□□□□ 0.11
SMPDL3A-202ENST00000487215 AQP11Q8NBQ7 271 aa15.73■□□□□ 0.11
SMPDL3A-202ENST00000487215 OR51I2Q9H344 312 aa15.73■□□□□ 0.11
SMPDL3A-202ENST00000487215 YY1AP1Q9H869 796 aa15.73■□□□□ 0.11
SMPDL3A-202ENST00000487215 MED20Q9H944 212 aa15.73■□□□□ 0.11
SMPDL3A-202ENST00000487215 ACTR3BQ9P1U1 418 aa15.73■□□□□ 0.11
SMPDL3A-202ENST00000487215 NOTCH3Q9UM47 2321 aa15.73■□□□□ 0.11
SMPDL3A-202ENST00000487215 FAM183AA6NL82 134 aa15.72■□□□□ 0.11
SMPDL3A-202ENST00000487215 RIIAD1A6NNX1 92 aa15.72■□□□□ 0.11
SMPDL3A-202ENST00000487215 CCNB2O95067 398 aa15.72■□□□□ 0.11
SMPDL3A-202ENST00000487215 ZNF3P17036 446 aa15.72■□□□□ 0.11
SMPDL3A-202ENST00000487215 LGALS4P56470 323 aa15.72■□□□□ 0.11
SMPDL3A-202ENST00000487215 CCBE1Q6UXH8 406 aaPredicted RBP15.72■□□□□ 0.11
SMPDL3A-202ENST00000487215 SHFQ7M4L6 423 aa15.72■□□□□ 0.11
SMPDL3A-202ENST00000487215 THAP5Q7Z6K1 395 aa15.72■□□□□ 0.11
SMPDL3A-202ENST00000487215 LHFPL4Q7Z7J7 247 aa15.72■□□□□ 0.11
SMPDL3A-202ENST00000487215 ARHGAP24Q8N264 748 aa15.72■□□□□ 0.11
SMPDL3A-202ENST00000487215 HIST1H2AAQ96QV6 131 aa15.72■□□□□ 0.11
SMPDL3A-202ENST00000487215 MUC13Q9H3R2 512 aa15.72■□□□□ 0.11
SMPDL3A-202ENST00000487215 ARL8BQ9NVJ2 186 aa15.72■□□□□ 0.11
SMPDL3A-202ENST00000487215 TCF19Q9Y242 345 aa15.72■□□□□ 0.11
SMPDL3A-202ENST00000487215 VGLL3A8MV65 326 aa15.71■□□□□ 0.11
SMPDL3A-202ENST00000487215 ZNF732B4DXR9 585 aa15.71■□□□□ 0.11
SMPDL3A-202ENST00000487215 GLCEO94923 617 aa15.71■□□□□ 0.11
SMPDL3A-202ENST00000487215 CCL3L1P16619 93 aa15.71■□□□□ 0.11
SMPDL3A-202ENST00000487215 ERVFRD-1P60508 538 aa15.71■□□□□ 0.11
SMPDL3A-202ENST00000487215 RPL31P62899 125 aaKnown RBP15.71■□□□□ 0.11
SMPDL3A-202ENST00000487215 GNG3P63215 75 aa15.71■□□□□ 0.11
SMPDL3A-202ENST00000487215 PPP1R8Q12972 351 aaKnown RBP15.71■□□□□ 0.11
SMPDL3A-202ENST00000487215 PLA1AQ53H76 456 aa15.71■□□□□ 0.11
SMPDL3A-202ENST00000487215 TMEM200BQ69YZ2 307 aa15.71■□□□□ 0.11
SMPDL3A-202ENST00000487215 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.71■□□□□ 0.11
SMPDL3A-202ENST00000487215 DYNAPQ8N1N2 210 aa15.71■□□□□ 0.11
SMPDL3A-202ENST00000487215 OR8B12Q8NGG6 310 aa15.71■□□□□ 0.11
SMPDL3A-202ENST00000487215 WNT10AQ9GZT5 417 aa15.71■□□□□ 0.11
SMPDL3A-202ENST00000487215 MAGIXQ9H6Y5 334 aa15.71■□□□□ 0.11
SMPDL3A-202ENST00000487215 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.71■□□□□ 0.11
SMPDL3A-202ENST00000487215 CMC2Q9NRP2 79 aa15.71■□□□□ 0.11
SMPDL3A-202ENST00000487215 LRP12Q9Y561 859 aa15.71■□□□□ 0.11
SMPDL3A-202ENST00000487215 A0A1W2PPH5 198 aa15.7■□□□□ 0.1
SMPDL3A-202ENST00000487215 FAM90A8PA6NJQ4 464 aa15.7■□□□□ 0.1
SMPDL3A-202ENST00000487215 MTRF1O75570 445 aaKnown RBP15.7■□□□□ 0.1
SMPDL3A-202ENST00000487215 MPIG6BO95866 241 aa15.7■□□□□ 0.1
SMPDL3A-202ENST00000487215 LYNP07948 512 aa15.7■□□□□ 0.1
SMPDL3A-202ENST00000487215 MAGEA2P43356 314 aa15.7■□□□□ 0.1
SMPDL3A-202ENST00000487215 RAB13P51153 203 aa15.7■□□□□ 0.1
SMPDL3A-202ENST00000487215 PSMA6P60900 246 aaKnown RBP15.7■□□□□ 0.1
SMPDL3A-202ENST00000487215 CNN3Q15417 329 aaKnown RBP15.7■□□□□ 0.1
SMPDL3A-202ENST00000487215 CEP78Q5JTW2 689 aa15.7■□□□□ 0.1
SMPDL3A-202ENST00000487215 PIGWQ7Z7B1 504 aa15.7■□□□□ 0.1
SMPDL3A-202ENST00000487215 TMEM219Q86XT9 240 aa15.7■□□□□ 0.1
SMPDL3A-202ENST00000487215 CD177Q8N6Q3 437 aa15.7■□□□□ 0.1
SMPDL3A-202ENST00000487215 ZNF671Q8TAW3 534 aa15.7■□□□□ 0.1
SMPDL3A-202ENST00000487215 AQP3Q92482 292 aa15.7■□□□□ 0.1
SMPDL3A-202ENST00000487215 OR5M11Q96RB7 305 aa15.7■□□□□ 0.1
SMPDL3A-202ENST00000487215 CDCA4Q9BXL8 241 aa15.7■□□□□ 0.1
SMPDL3A-202ENST00000487215 A6NDX4 124 aa15.69■□□□□ 0.1
SMPDL3A-202ENST00000487215 RFPL4AA6NLU0 287 aa15.69■□□□□ 0.1
SMPDL3A-202ENST00000487215 RFPL4AL1F8VTS6 287 aa15.69■□□□□ 0.1
SMPDL3A-202ENST00000487215 IGLL1P15814 213 aa15.69■□□□□ 0.1
SMPDL3A-202ENST00000487215 PAICSP22234 425 aaKnown RBP15.69■□□□□ 0.1
SMPDL3A-202ENST00000487215 GNGT1P63211 74 aa15.69■□□□□ 0.1
SMPDL3A-202ENST00000487215 GK3PQ14409 553 aa15.69■□□□□ 0.1
SMPDL3A-202ENST00000487215 ZNF273Q14593 569 aa15.69■□□□□ 0.1
SMPDL3A-202ENST00000487215 CEACAM21Q3KPI0 293 aa15.69■□□□□ 0.1
SMPDL3A-202ENST00000487215 DMRTC1Q5HYR2 192 aa15.69■□□□□ 0.1
SMPDL3A-202ENST00000487215 HAGHLQ6PII5 290 aaPredicted RBP15.69■□□□□ 0.1
SMPDL3A-202ENST00000487215 CYP2R1Q6VVX0 501 aa15.69■□□□□ 0.1
SMPDL3A-202ENST00000487215 ZNF782Q6ZMW2 699 aaPredicted RBP15.69■□□□□ 0.1
SMPDL3A-202ENST00000487215 KRT74Q7RTS7 529 aa15.69■□□□□ 0.1
SMPDL3A-202ENST00000487215 OR4M1Q8NGD0 313 aa15.69■□□□□ 0.1
SMPDL3A-202ENST00000487215 OTOSQ8NHW6 89 aa15.69■□□□□ 0.1
SMPDL3A-202ENST00000487215 FAM81AQ8TBF8 368 aa15.69■□□□□ 0.1
SMPDL3A-202ENST00000487215 THEM6Q8WUY1 208 aa15.69■□□□□ 0.1
SMPDL3A-202ENST00000487215 OTULINQ96BN8 352 aa15.69■□□□□ 0.1
SMPDL3A-202ENST00000487215 REEP1Q9H902 201 aa15.69■□□□□ 0.1
SMPDL3A-202ENST00000487215 USE1Q9NZ43 259 aa15.69■□□□□ 0.1
SMPDL3A-202ENST00000487215 hCG_1809904A0A1W2PP81 198 aa15.68■□□□□ 0.1
SMPDL3A-202ENST00000487215 A0A1W2PPE2 198 aa15.68■□□□□ 0.1
SMPDL3A-202ENST00000487215 A0A1W2PR64 198 aa15.68■□□□□ 0.1
SMPDL3A-202ENST00000487215 A0A1W2PRV1 198 aa15.68■□□□□ 0.1
SMPDL3A-202ENST00000487215 K7EIL1 84 aa15.68■□□□□ 0.1
SMPDL3A-202ENST00000487215 SELENOFO60613 162 aa15.68■□□□□ 0.1
SMPDL3A-202ENST00000487215 PEX14O75381 377 aa15.68■□□□□ 0.1
SMPDL3A-202ENST00000487215 CD33P20138 364 aa15.68■□□□□ 0.1
SMPDL3A-202ENST00000487215 MICAQ29983 383 aa15.68■□□□□ 0.1
SMPDL3A-202ENST00000487215 FAM98BQ52LJ0 330 aaKnown RBP15.68■□□□□ 0.1
SMPDL3A-202ENST00000487215 C11orf87Q6NUJ2 197 aa15.68■□□□□ 0.1
SMPDL3A-202ENST00000487215 ACP7Q6ZNF0 438 aa15.68■□□□□ 0.1
SMPDL3A-202ENST00000487215 DHFR2Q86XF0 187 aa15.68■□□□□ 0.1
SMPDL3A-202ENST00000487215 IQCF1Q8N6M8 205 aa15.68■□□□□ 0.1
SMPDL3A-202ENST00000487215 WFDC9Q8NEX5 89 aa15.68■□□□□ 0.1
SMPDL3A-202ENST00000487215 ZNF488Q96MN9 340 aa15.68■□□□□ 0.1
SMPDL3A-202ENST00000487215 DGCR6LQ9BY27 220 aa15.68■□□□□ 0.1
SMPDL3A-202ENST00000487215 PRSS22Q9GZN4 317 aa15.68■□□□□ 0.1
SMPDL3A-202ENST00000487215 OR51V1Q9H2C8 321 aa15.68■□□□□ 0.1
SMPDL3A-202ENST00000487215 VNN3Q9NY84 501 aa15.68■□□□□ 0.1
SMPDL3A-202ENST00000487215 RASL12Q9NYN1 266 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms