RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 XIAPP98170 497 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 PITPNAQ00169 270 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 KDSRQ06136 332 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 SIGLEC14Q08ET2 396 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 ZNF816Q0VGE8 651 aaPredicted RBP2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 PNOCQ13519 176 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 PIGHQ14442 188 aaPredicted RBP2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 BCL2A1Q16548 175 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 HADHQ16836 314 aaKnown RBP2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 C5orf64Q2M2E5 130 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 RGS21Q2M5E4 152 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 LIN52Q52LA3 116 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 RNASE13Q5GAN3 156 aaKnown RBP2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 TPRG1LQ5T0D9 272 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 NIPAL1Q6NVV3 410 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 MRPL21Q7Z2W9 205 aaKnown RBP2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 CD302Q8IX05 232 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 TMEM256Q8N2U0 113 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 KIF2BQ8N4N8 673 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 TRAM1L1Q8N609 369 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 LINC00469Q8N7U9 141 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 ZNF709Q8N972 641 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 OR7G1Q8NGA0 311 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 OR1J4Q8NGS1 313 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 OR9A2Q8NGT5 310 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 ANGPTL6Q8NI99 470 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 PIH1D2Q8WWB5 315 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 ASZ1Q8WWH4 475 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 NELFBQ8WX92 580 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 ZNF707Q96C28 371 aaPredicted RBP2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 RCN3Q96D15 328 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 DGCR14Q96DF8 476 aaKnown RBP2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 ARL5BQ96KC2 179 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 SCGB3A2Q96PL1 93 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 TEAD3Q99594 435 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 TBL1YQ9BQ87 522 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 NAA50Q9GZZ1 169 aaKnown RBP2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 EXOSC4Q9NPD3 245 aaKnown RBP2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 C12orf4Q9NQ89 552 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 PRSS16Q9NQE7 514 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 DYRK4Q9NR20 520 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 ENOPH1Q9UHY7 261 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 STK38LQ9Y2H1 464 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 ZNF835Q9Y2P0 537 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 HES2Q9Y543 173 aa2.03□□□□□ -2.08
SNRNP27-204ENST00000487029 LAMC1P11047 1609 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 IQGAP2Q13576 1575 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 CDK13Q14004 1512 aaKnown RBP2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 IFT140Q96RY7 1462 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 KDM6AO15550 1401 aaPredicted RBP2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 DAPK1P53355 1430 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 FGD6Q6ZV73 1430 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 ANKRD50Q9ULJ7 1429 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 ABCC11Q96J66 1382 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 TCHHQ07283 1943 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 IGHV3-72A0A0B4J1Y9 119 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 TRAV40A0A0B4J280 105 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 IGHV7-4-1A0A0J9YVY3 117 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 CENPVL3A0A0U1RRI6 287 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 OR5H1A6NKK0 313 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 TRPC5OSA6NMA1 111 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 GOLGA8JA6NMD2 632 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 COLCA2A8K830 154 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 EVPLLA8MZ36 301 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 SLC19A2O60779 497 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 CRTAPO75718 401 aaPredicted RBP2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 DCTN3O75935 186 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 PAHP00439 452 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 CATP04040 527 aaKnown RBP2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 DCNP07585 359 aaKnown RBP2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 OCM2P0CE71 109 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 OCMP0CE72 109 aaPredicted RBP2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 PRKACAP17612 351 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 IL1RNP18510 177 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 SRMP19623 302 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 PMCHP20382 165 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 LOXP28300 417 aaPredicted RBP2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 GABRR2P28476 465 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 BMI1P35226 326 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 GGT2P36268 569 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 POLR2IP36954 125 aaKnown RBP2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 OR1G1P47890 313 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 HSPA13P48723 471 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 TUFMP49411 452 aaKnown RBP2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 ETV1P50549 477 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 PSMD4P55036 377 aaKnown RBP2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 CLDN6P56747 220 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 GNG2P59768 71 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 OR2B8PP59922 312 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 RAB14P61106 215 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 B2MP61769 119 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 VSNL1P62760 191 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 MYL5Q02045 173 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 MED21Q13503 144 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 KRR1Q13601 381 aaKnown RBP2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 KCTD16Q68DU8 428 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 TMPRSS11AQ6ZMR5 421 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 LINC00336Q6ZUF6 198 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 VTCN1Q7Z7D3 282 aa2.02□□□□□ -2.09
SNRNP27-204ENST00000487029 LINC00523Q86TU6 105 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms