RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 PLPPR5Q32ZL2 321 aa10.71□□□□□ -0.69
COL3A1-206ENST00000487010 AWAT1Q58HT5 328 aa10.71□□□□□ -0.69
COL3A1-206ENST00000487010 RTL6Q6ICC9 239 aa10.71□□□□□ -0.69
COL3A1-206ENST00000487010 SLC16A14Q7RTX9 510 aa10.71□□□□□ -0.69
COL3A1-206ENST00000487010 OR6X1Q8NH79 312 aa10.71□□□□□ -0.69
COL3A1-206ENST00000487010 NPRL2Q8WTW4 380 aa10.71□□□□□ -0.69
COL3A1-206ENST00000487010 SLC25A43Q8WUT9 341 aaPredicted RBP10.71□□□□□ -0.69
COL3A1-206ENST00000487010 MRPL24Q96A35 216 aaKnown RBP10.71□□□□□ -0.69
COL3A1-206ENST00000487010 ZNF251Q9BRH9 671 aa10.71□□□□□ -0.69
COL3A1-206ENST00000487010 SCRT1Q9BWW7 348 aa10.71□□□□□ -0.69
COL3A1-206ENST00000487010 PARP12Q9H0J9 701 aaKnown RBP10.71□□□□□ -0.69
COL3A1-206ENST00000487010 ZMAT5Q9UDW3 170 aaKnown RBP10.71□□□□□ -0.69
COL3A1-206ENST00000487010 MCTS1Q9ULC4 181 aaKnown RBP10.71□□□□□ -0.69
COL3A1-206ENST00000487010 A0A1W2PR77 199 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 DHRS7CA6NNS2 312 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 LINC00587B1AMM8 73 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 IGLV3-1P01715 115 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 FABP1P07148 127 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 SNRNP70P08621 437 aaKnown RBP10.7□□□□□ -0.7
COL3A1-206ENST00000487010 QDPRP09417 244 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 ZNF806P0C7X5 589 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 CBR1P16152 277 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 PMELP40967 661 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 UBE2V2Q15819 145 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 HIST3H3Q16695 136 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 MIDNQ504T8 468 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 NFAM1Q8NET5 270 aaPredicted RBP10.7□□□□□ -0.7
COL3A1-206ENST00000487010 RNF138Q8WVD3 245 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 SLC39A7Q92504 469 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 ERGIC1Q969X5 290 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 PGAM5Q96HS1 289 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 MESP1Q9BRJ9 268 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 RGCCQ9H4X1 137 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 SEBOXQ9HB31 216 aaPredicted RBP10.7□□□□□ -0.7
COL3A1-206ENST00000487010 DECR2Q9NUI1 292 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 KLRF1Q9NZS2 232 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 PPP4R1LQ9P1A2 415 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 MYO9BQ13459 2157 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 IGHV1OR21-1A0A087WYE8 117 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 A0A1W2PNR3 127 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 A0A1W2PPE3 182 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 ZNF814B7Z6K7 855 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 LMO7DNF2Z398 122 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 DANCRP0C864 163 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 FCGR2AP12318 317 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 CTSSP25774 331 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 MSX1P28360 303 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 GUK1Q16774 197 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 LCN10Q6JVE6 187 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 C6orf201Q7Z4U5 140 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 LURAP1LQ8IV03 231 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 CARFQ8N187 725 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 OXGR1Q96P68 337 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 TAAR9Q96RI9 348 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 METTL1Q9UBP6 276 aaKnown RBP10.7□□□□□ -0.7
COL3A1-206ENST00000487010 PADI1Q9ULC6 663 aa10.7□□□□□ -0.7
COL3A1-206ENST00000487010 E5RGE8 158 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 NME2P1O60361 137 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 SCGB1D2O95969 90 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 SEC11BP0C7V7 166 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 ANKRD37Q7Z713 158 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 PLXDC1Q8IUK5 500 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 STT3BQ8TCJ2 826 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 BSCL2Q96G97 398 aaPredicted RBP10.69□□□□□ -0.7
COL3A1-206ENST00000487010 IP6K3Q96PC2 410 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 S100A13Q99584 98 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 SPACA1Q9HBV2 294 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 GSN-AS1Q9NRJ2 163 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 NSG2Q9Y328 171 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 V9GYS6 101 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 RALGAPA1Q6GYQ0 2036 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 A0A1W2PPH5 198 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 A6NLC8 198 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 ZNF726A6NNF4 738 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 MBPP02686 304 aaPredicted RBP10.69□□□□□ -0.7
COL3A1-206ENST00000487010 ZNF43P17038 809 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 ACKR3P25106 362 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 CD27P26842 260 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 GLP1RP43220 463 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 FABP9Q0Z7S8 132 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 CLEC9AQ6UXN8 241 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 HAS2Q92819 552 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 TCEAL3Q969E4 200 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 ISOC2Q96AB3 205 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 ZNF501Q96CX3 271 aaPredicted RBP10.69□□□□□ -0.7
COL3A1-206ENST00000487010 GINS3Q9BRX5 216 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 HDHD3Q9BSH5 251 aaPredicted RBP10.69□□□□□ -0.7
COL3A1-206ENST00000487010 TPSD1Q9BZJ3 242 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 TGIF2Q9GZN2 237 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 ELL3Q9HB65 397 aaPredicted RBP10.69□□□□□ -0.7
COL3A1-206ENST00000487010 WFDC1Q9HC57 220 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 PLEKHJ1Q9NW61 149 aa10.69□□□□□ -0.7
COL3A1-206ENST00000487010 IGLV3-32A0A0A0MS00 114 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 BORCS7-ASMTA0A0B4J1R7 106 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 IGHV1OR15-9A0A0B4J2B8 117 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 A0A0U1RQV5 110 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 M0R036 132 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 MASP2O00187 686 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 RAMP1O60894 148 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 DHRS3O75911 302 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms