RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 ZNF608Q9ULD9 1512 aaPredicted RBP1.85□□□□□ -2.11
LTN1-206ENST00000486427 MUC6Q6W4X9 2439 aa1.84□□□□□ -2.11
LTN1-206ENST00000486427 H0YIV9 168 aa1.84□□□□□ -2.11
LTN1-206ENST00000486427 H3BN98 237 aa1.84□□□□□ -2.11
LTN1-206ENST00000486427 CASC3O15234 703 aaKnown RBP1.84□□□□□ -2.11
LTN1-206ENST00000486427 STAG3L3P0CL85 134 aa1.84□□□□□ -2.11
LTN1-206ENST00000486427 CD99P14209 185 aa1.84□□□□□ -2.11
LTN1-206ENST00000486427 IL3RAP26951 378 aa1.84□□□□□ -2.11
LTN1-206ENST00000486427 MPIP34949 423 aa1.84□□□□□ -2.11
LTN1-206ENST00000486427 FUSP35637 526 aaKnown RBP eCLIP1.84□□□□□ -2.11
LTN1-206ENST00000486427 CLDN6P56747 220 aa1.84□□□□□ -2.11
LTN1-206ENST00000486427 TPRG1LQ5T0D9 272 aa1.84□□□□□ -2.11
LTN1-206ENST00000486427 ZNF660Q6AZW8 331 aaPredicted RBP1.84□□□□□ -2.11
LTN1-206ENST00000486427 MORN3Q6PF18 240 aaPredicted RBP1.84□□□□□ -2.11
LTN1-206ENST00000486427 NDUFAF7Q7L592 441 aa1.84□□□□□ -2.11
LTN1-206ENST00000486427 MRPL21Q7Z2W9 205 aaKnown RBP1.84□□□□□ -2.11
LTN1-206ENST00000486427 TMCO2Q7Z6W1 182 aaPredicted RBP1.84□□□□□ -2.11
LTN1-206ENST00000486427 Q8NDZ9 215 aa1.84□□□□□ -2.11
LTN1-206ENST00000486427 OR4M2Q8NGB6 313 aa1.84□□□□□ -2.11
LTN1-206ENST00000486427 RXFP2Q8WXD0 754 aa1.84□□□□□ -2.11
LTN1-206ENST00000486427 ISOC2Q96AB3 205 aa1.84□□□□□ -2.11
LTN1-206ENST00000486427 IGF2BP2-AS1Q96M15 143 aa1.84□□□□□ -2.11
LTN1-206ENST00000486427 OR2V2Q96R30 315 aa1.84□□□□□ -2.11
LTN1-206ENST00000486427 FANCEQ9HB96 536 aa1.84□□□□□ -2.11
LTN1-206ENST00000486427 PEF1Q9UBV8 284 aaKnown RBP1.84□□□□□ -2.11
LTN1-206ENST00000486427 CES1P1Q9UKY3 287 aa1.84□□□□□ -2.11
LTN1-206ENST00000486427 DDX19BQ9UMR2 479 aa1.84□□□□□ -2.11
LTN1-206ENST00000486427 RHBDD3Q9Y3P4 386 aa1.84□□□□□ -2.11
LTN1-206ENST00000486427 TTC41PQ6P2S7 1318 aa1.84□□□□□ -2.12
LTN1-206ENST00000486427 PLEKHG2Q9H7P9 1386 aa1.84□□□□□ -2.12
LTN1-206ENST00000486427 JCADQ9P266 1359 aa1.84□□□□□ -2.12
LTN1-206ENST00000486427 NCF1BA6NI72 391 aaPredicted RBP1.83□□□□□ -2.12
LTN1-206ENST00000486427 NCF1CA8MVU1 366 aaPredicted RBP1.83□□□□□ -2.12
LTN1-206ENST00000486427 C15orf65H3BRN8 121 aa1.83□□□□□ -2.12
LTN1-206ENST00000486427 PLXNB1O43157 2135 aa1.83□□□□□ -2.12
LTN1-206ENST00000486427 HSBP1O75506 76 aa1.83□□□□□ -2.12
LTN1-206ENST00000486427 UPK1BO75841 260 aa1.83□□□□□ -2.12
LTN1-206ENST00000486427 IGHG2P01859 326 aa1.83□□□□□ -2.12
LTN1-206ENST00000486427 TUBG1P23258 451 aa1.83□□□□□ -2.12
LTN1-206ENST00000486427 PPP1CAP62136 330 aa1.83□□□□□ -2.12
LTN1-206ENST00000486427 YWHAEP62258 255 aaKnown RBP1.83□□□□□ -2.12
LTN1-206ENST00000486427 ZNF141Q15928 474 aa1.83□□□□□ -2.12
LTN1-206ENST00000486427 KLHL40Q2TBA0 621 aa1.83□□□□□ -2.12
LTN1-206ENST00000486427 FAM104BQ5XKR9 115 aa1.83□□□□□ -2.12
LTN1-206ENST00000486427 SLC30A8Q8IWU4 369 aa1.83□□□□□ -2.12
LTN1-206ENST00000486427 TRAM1L1Q8N609 369 aa1.83□□□□□ -2.12
LTN1-206ENST00000486427 WDR31Q8NA23 367 aa1.83□□□□□ -2.12
LTN1-206ENST00000486427 MUC7Q8TAX7 377 aa1.83□□□□□ -2.12
LTN1-206ENST00000486427 SNF8Q96H20 258 aa1.83□□□□□ -2.12
LTN1-206ENST00000486427 ALS2CR12Q96Q35 445 aa1.83□□□□□ -2.12
LTN1-206ENST00000486427 NAPGQ99747 312 aaPredicted RBP1.83□□□□□ -2.12
LTN1-206ENST00000486427 OR51B5Q9H339 312 aa1.83□□□□□ -2.12
LTN1-206ENST00000486427 DSN1Q9H410 356 aa1.83□□□□□ -2.12
LTN1-206ENST00000486427 TUBG2Q9NRH3 451 aa1.83□□□□□ -2.12
LTN1-206ENST00000486427 NLE1Q9NVX2 485 aaPredicted RBP1.83□□□□□ -2.12
LTN1-206ENST00000486427 VAX2Q9UIW0 290 aa1.83□□□□□ -2.12
LTN1-206ENST00000486427 PSME2Q9UL46 239 aa1.83□□□□□ -2.12
LTN1-206ENST00000486427 LOC102724200A0A096LPH7 203 aaPredicted RBP1.82□□□□□ -2.12
LTN1-206ENST00000486427 IGHV6-1A0A0B4J1U7 121 aa1.82□□□□□ -2.12
LTN1-206ENST00000486427 HACD1B0YJ81 288 aa1.82□□□□□ -2.12
LTN1-206ENST00000486427 AQP9O43315 295 aa1.82□□□□□ -2.12
LTN1-206ENST00000486427 LCA5LO95447 670 aa1.82□□□□□ -2.12
LTN1-206ENST00000486427 TTC4O95801 387 aa1.82□□□□□ -2.12
LTN1-206ENST00000486427 NRASP01111 189 aa1.82□□□□□ -2.12
LTN1-206ENST00000486427 HRASP01112 189 aa1.82□□□□□ -2.12
LTN1-206ENST00000486427 KRASP01116 189 aa1.82□□□□□ -2.12
LTN1-206ENST00000486427 ERFP50548 548 aa1.82□□□□□ -2.12
LTN1-206ENST00000486427 DAOAP59103 153 aa1.82□□□□□ -2.12
LTN1-206ENST00000486427 TSC22D1Q15714 1073 aa1.82□□□□□ -2.12
LTN1-206ENST00000486427 HIKESHIQ53FT3 197 aa1.82□□□□□ -2.12
LTN1-206ENST00000486427 RNF10Q8N5U6 811 aaKnown RBP1.82□□□□□ -2.12
LTN1-206ENST00000486427 PROKR2Q8NFJ6 384 aa1.82□□□□□ -2.12
LTN1-206ENST00000486427 OR10Z1Q8NGY1 313 aa1.82□□□□□ -2.12
LTN1-206ENST00000486427 OR1S1Q8NH92 325 aa1.82□□□□□ -2.12
LTN1-206ENST00000486427 SFXN5Q8TD22 340 aa1.82□□□□□ -2.12
LTN1-206ENST00000486427 ISG20Q96AZ6 181 aaKnown RBP1.82□□□□□ -2.12
LTN1-206ENST00000486427 TMEM175Q9BSA9 504 aa1.82□□□□□ -2.12
LTN1-206ENST00000486427 OR2AG1Q9H205 316 aa1.82□□□□□ -2.12
LTN1-206ENST00000486427 ARV1Q9H2C2 271 aa1.82□□□□□ -2.12
LTN1-206ENST00000486427 VSIRQ9H7M9 311 aa1.82□□□□□ -2.12
LTN1-206ENST00000486427 DDX18Q9NVP1 670 aaKnown RBP1.82□□□□□ -2.12
LTN1-206ENST00000486427 RAB22AQ9UL26 194 aa1.82□□□□□ -2.12
LTN1-206ENST00000486427 MCTS1Q9ULC4 181 aaKnown RBP1.82□□□□□ -2.12
LTN1-206ENST00000486427 NDRG2Q9UN36 371 aaKnown RBP1.82□□□□□ -2.12
LTN1-206ENST00000486427 GOLGA6L7A0A1B0GV03 622 aa1.81□□□□□ -2.12
LTN1-206ENST00000486427 GOLGA8JA6NMD2 632 aa1.81□□□□□ -2.12
LTN1-206ENST00000486427 MYL12BO14950 172 aa1.81□□□□□ -2.12
LTN1-206ENST00000486427 CPSF4O95639 269 aaKnown RBP1.81□□□□□ -2.12
LTN1-206ENST00000486427 KLK1P06870 262 aa1.81□□□□□ -2.12
LTN1-206ENST00000486427 GOLGA8HP0CJ92 632 aa1.81□□□□□ -2.12
LTN1-206ENST00000486427 RALBP11234 206 aa1.81□□□□□ -2.12
LTN1-206ENST00000486427 PRSS3P35030 304 aa1.81□□□□□ -2.12
LTN1-206ENST00000486427 OR12D2P58182 307 aa1.81□□□□□ -2.12
LTN1-206ENST00000486427 KRTAP12-1P59990 96 aa1.81□□□□□ -2.12
LTN1-206ENST00000486427 LDLRAD2Q5SZI1 272 aa1.81□□□□□ -2.12
LTN1-206ENST00000486427 CPTPQ5TA50 214 aa1.81□□□□□ -2.12
LTN1-206ENST00000486427 LIN9Q5TKA1 542 aa1.81□□□□□ -2.12
LTN1-206ENST00000486427 FA2HQ7L5A8 372 aa1.81□□□□□ -2.12
LTN1-206ENST00000486427 OR2M7Q8NG81 312 aa1.81□□□□□ -2.12
LTN1-206ENST00000486427 ZNF420Q8TAQ5 688 aaPredicted RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms