RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 PLCXD3Q63HM9 321 aa15.19■□□□□ 0.02
PRPF40A-209ENST00000486100 RUSC1-AS1Q66K80 236 aa15.19■□□□□ 0.02
PRPF40A-209ENST00000486100 C16orf87Q6PH81 154 aa15.19■□□□□ 0.02
PRPF40A-209ENST00000486100 PLEKHG7Q6ZR37 379 aa15.19■□□□□ 0.02
PRPF40A-209ENST00000486100 Q6ZSR3 168 aa15.19■□□□□ 0.02
PRPF40A-209ENST00000486100 SSX6Q7RTT6 188 aa15.19■□□□□ 0.02
PRPF40A-209ENST00000486100 AQP3Q92482 292 aa15.19■□□□□ 0.02
PRPF40A-209ENST00000486100 LHX4Q969G2 390 aa15.19■□□□□ 0.02
PRPF40A-209ENST00000486100 TBX5Q99593 518 aa15.19■□□□□ 0.02
PRPF40A-209ENST00000486100 DCTN5Q9BTE1 182 aa15.19■□□□□ 0.02
PRPF40A-209ENST00000486100 V9GYS6 101 aa15.19■□□□□ 0.02
PRPF40A-209ENST00000486100 IGHV1-69DA0A0B4J2H0 117 aa15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 A0A1W2PQL4 384 aaPredicted RBP15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 NKX6-3A6NJ46 265 aa15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 OR2AT4A6NND4 320 aa15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 HOXA3O43365 443 aaPredicted RBP15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 IGHV1-69P01742 117 aa15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 ACAA1P09110 424 aaPredicted RBP15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 ATP6V1E1P36543 226 aa15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 CDC42P60953 191 aa15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 IL13RA1P78552 427 aa15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 CLVS2Q5SYC1 327 aa15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 ZNF684Q5T5D7 378 aa15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 TMEM42Q69YG0 159 aa15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 HAGHLQ6PII5 290 aaPredicted RBP15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 Q6YL49 198 aa15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 CCDC121Q6ZUS5 278 aa15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 YIPF7Q8N8F6 280 aa15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 OR14K1Q8NGZ2 314 aa15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 TRUB1Q8WWH5 349 aaKnown RBP15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 RFKQ969G6 155 aa15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 EME1Q96AY2 570 aa15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 TMIGD2Q96BF3 282 aa15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 GAFA1Q96PS6 74 aa15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 RASL12Q9NYN1 266 aa15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 SLC22A13Q9Y226 551 aa15.18■□□□□ 0.02
PRPF40A-209ENST00000486100 A0A1B0GVI7 797 aa15.17■□□□□ 0.02
PRPF40A-209ENST00000486100 METTL15A6NJ78 407 aa15.17■□□□□ 0.02
PRPF40A-209ENST00000486100 DHRS7CA6NNS2 312 aa15.17■□□□□ 0.02
PRPF40A-209ENST00000486100 DLGAP1O14490 977 aa15.17■□□□□ 0.02
PRPF40A-209ENST00000486100 SIGLEC5O15389 551 aa15.17■□□□□ 0.02
PRPF40A-209ENST00000486100 SULT1C4O75897 302 aa15.17■□□□□ 0.02
PRPF40A-209ENST00000486100 RPP14O95059 124 aaKnown RBP15.17■□□□□ 0.02
PRPF40A-209ENST00000486100 SELLP14151 372 aa15.17■□□□□ 0.02
PRPF40A-209ENST00000486100 KPNB1Q14974 876 aaKnown RBP15.17■□□□□ 0.02
PRPF40A-209ENST00000486100 DGUOKQ16854 277 aa15.17■□□□□ 0.02
PRPF40A-209ENST00000486100 ZFP1Q6P2D0 407 aa15.17■□□□□ 0.02
PRPF40A-209ENST00000486100 C8orf46Q8TAG6 207 aa15.17■□□□□ 0.02
PRPF40A-209ENST00000486100 ACOXLQ9NUZ1 547 aa15.17■□□□□ 0.02
PRPF40A-209ENST00000486100 ONECUT1Q9UBC0 465 aa15.17■□□□□ 0.02
PRPF40A-209ENST00000486100 SLC25A10Q9UBX3 287 aaPredicted RBP15.17■□□□□ 0.02
PRPF40A-209ENST00000486100 TENM1Q9UKZ4 2725 aa15.16■□□□□ 0.02
PRPF40A-209ENST00000486100 IGKV1D-17A0A075B6S4 117 aa15.16■□□□□ 0.02
PRPF40A-209ENST00000486100 H3BNX3 289 aa15.16■□□□□ 0.02
PRPF40A-209ENST00000486100 APOL3O95236 402 aa15.16■□□□□ 0.02
PRPF40A-209ENST00000486100 TFF1P04155 84 aa15.16■□□□□ 0.02
PRPF40A-209ENST00000486100 ALPLP05186 524 aa15.16■□□□□ 0.02
PRPF40A-209ENST00000486100 PSG2P11465 335 aa15.16■□□□□ 0.02
PRPF40A-209ENST00000486100 CCL1P22362 96 aa15.16■□□□□ 0.02
PRPF40A-209ENST00000486100 GABRA2P47869 451 aa15.16■□□□□ 0.02
PRPF40A-209ENST00000486100 CAV3P56539 151 aa15.16■□□□□ 0.02
PRPF40A-209ENST00000486100 VMO1Q7Z5L0 202 aa15.16■□□□□ 0.02
PRPF40A-209ENST00000486100 ZNF573Q86YE8 665 aa15.16■□□□□ 0.02
PRPF40A-209ENST00000486100 CMTM4Q8IZR5 234 aa15.16■□□□□ 0.02
PRPF40A-209ENST00000486100 KIR3DL3Q8N743 410 aa15.16■□□□□ 0.02
PRPF40A-209ENST00000486100 OR10H4Q8NGA5 316 aa15.16■□□□□ 0.02
PRPF40A-209ENST00000486100 H1FXQ92522 213 aaKnown RBP15.16■□□□□ 0.02
PRPF40A-209ENST00000486100 ZNF747Q9BV97 191 aa15.16■□□□□ 0.02
PRPF40A-209ENST00000486100 GPR173Q9NS66 373 aa15.16■□□□□ 0.02
PRPF40A-209ENST00000486100 USE1Q9NZ43 259 aa15.16■□□□□ 0.02
PRPF40A-209ENST00000486100 ORC6Q9Y5N6 252 aa15.16■□□□□ 0.02
PRPF40A-209ENST00000486100 NDUFB7P17568 137 aa15.15■□□□□ 0.02
PRPF40A-209ENST00000486100 HAAOP46952 286 aa15.15■□□□□ 0.02
PRPF40A-209ENST00000486100 METAP1DQ6UB28 335 aaPredicted RBP15.15■□□□□ 0.02
PRPF40A-209ENST00000486100 C1orf122Q6ZSJ8 110 aa15.15■□□□□ 0.02
PRPF40A-209ENST00000486100 CATSPERDQ86XM0 798 aa15.15■□□□□ 0.02
PRPF40A-209ENST00000486100 C10orf67Q8IYJ2 551 aa15.15■□□□□ 0.02
PRPF40A-209ENST00000486100 TMEM86BQ8N661 226 aa15.15■□□□□ 0.02
PRPF40A-209ENST00000486100 POC1AQ8NBT0 407 aa15.15■□□□□ 0.02
PRPF40A-209ENST00000486100 RORBQ92753 470 aa15.15■□□□□ 0.02
PRPF40A-209ENST00000486100 UBE2FQ969M7 185 aa15.15■□□□□ 0.02
PRPF40A-209ENST00000486100 HRASLS5Q96KN8 279 aa15.15■□□□□ 0.02
PRPF40A-209ENST00000486100 IMPAD1Q9NX62 359 aa15.15■□□□□ 0.02
PRPF40A-209ENST00000486100 ZNF222Q9UK12 451 aa15.15■□□□□ 0.02
PRPF40A-209ENST00000486100 MAB21L2Q9Y586 359 aa15.15■□□□□ 0.02
PRPF40A-209ENST00000486100 PCDHGB1Q9Y5G3 927 aa15.15■□□□□ 0.02
PRPF40A-209ENST00000486100 PQLC2LA1A4F0 135 aa15.14■□□□□ 0.01
PRPF40A-209ENST00000486100 A6NIN4 97 aa15.14■□□□□ 0.01
PRPF40A-209ENST00000486100 J3QT63 122 aa15.14■□□□□ 0.01
PRPF40A-209ENST00000486100 EI24O14681 340 aa15.14■□□□□ 0.01
PRPF40A-209ENST00000486100 NOS1APO75052 506 aaPredicted RBP15.14■□□□□ 0.01
PRPF40A-209ENST00000486100 MELTFP08582 738 aa15.14■□□□□ 0.01
PRPF40A-209ENST00000486100 ALDH3A2P51648 485 aa15.14■□□□□ 0.01
PRPF40A-209ENST00000486100 SLC25A30Q5SVS4 291 aa15.14■□□□□ 0.01
PRPF40A-209ENST00000486100 ACP7Q6ZNF0 438 aa15.14■□□□□ 0.01
PRPF40A-209ENST00000486100 PDZD9Q8IXQ8 264 aa15.14■□□□□ 0.01
PRPF40A-209ENST00000486100 Q8N7P7 452 aa15.14■□□□□ 0.01
PRPF40A-209ENST00000486100 ZNRF1Q8ND25 227 aa15.14■□□□□ 0.01
PRPF40A-209ENST00000486100 SGMS2Q8NHU3 365 aa15.14■□□□□ 0.01
PRPF40A-209ENST00000486100 SDSLQ96GA7 329 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms