RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 MRPL28Q13084 256 aaKnown RBP10.42□□□□□ -0.74
HMG20B-211ENST00000486028 ESCO2Q56NI9 601 aa10.42□□□□□ -0.74
HMG20B-211ENST00000486028 CEP78Q5JTW2 689 aa10.42□□□□□ -0.74
HMG20B-211ENST00000486028 TMEM244Q5VVB8 128 aa10.42□□□□□ -0.74
HMG20B-211ENST00000486028 PLCXD3Q63HM9 321 aa10.42□□□□□ -0.74
HMG20B-211ENST00000486028 SFRP4Q6FHJ7 346 aaPredicted RBP10.42□□□□□ -0.74
HMG20B-211ENST00000486028 FAHD2BQ6P2I3 314 aaPredicted RBP10.42□□□□□ -0.74
HMG20B-211ENST00000486028 DCDC5Q6ZRR9 648 aa10.42□□□□□ -0.74
HMG20B-211ENST00000486028 SYS1Q8N2H4 156 aa10.42□□□□□ -0.74
HMG20B-211ENST00000486028 C19orf18Q8NEA5 215 aa10.42□□□□□ -0.74
HMG20B-211ENST00000486028 OR4M2Q8NGB6 313 aa10.42□□□□□ -0.74
HMG20B-211ENST00000486028 LRRC29Q8WV35 223 aa10.42□□□□□ -0.74
HMG20B-211ENST00000486028 HPSE2Q8WWQ2 592 aa10.42□□□□□ -0.74
HMG20B-211ENST00000486028 RNF166Q96A37 237 aaPredicted RBP10.42□□□□□ -0.74
HMG20B-211ENST00000486028 PELI1Q96FA3 418 aa10.42□□□□□ -0.74
HMG20B-211ENST00000486028 NEIL1Q96FI4 390 aaPredicted RBP10.42□□□□□ -0.74
HMG20B-211ENST00000486028 FAHD2AQ96GK7 314 aa10.42□□□□□ -0.74
HMG20B-211ENST00000486028 ANKRD60Q9BZ19 345 aa10.42□□□□□ -0.74
HMG20B-211ENST00000486028 METTL17Q9H7H0 456 aaPredicted RBP10.42□□□□□ -0.74
HMG20B-211ENST00000486028 PLGRKTQ9HBL7 147 aa10.42□□□□□ -0.74
HMG20B-211ENST00000486028 FRRS1LQ9P0K9 344 aa10.42□□□□□ -0.74
HMG20B-211ENST00000486028 PPIAL4CA0A0B4J2A2 164 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 OOEPA6NGQ2 149 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 J3QLI3 93 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 SERPINA3P01011 423 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 GNAO1P09471 354 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 FAM157CP0CG43 387 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 SRD5A1P18405 259 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 ZFP36P26651 326 aaKnown RBP10.41□□□□□ -0.74
HMG20B-211ENST00000486028 DCKP27707 260 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 CD80P33681 288 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 SRP14P37108 136 aaKnown RBP10.41□□□□□ -0.74
HMG20B-211ENST00000486028 KIR3DL2P43630 455 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 CCR9P51686 369 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 GBX2P52951 348 aaPredicted RBP10.41□□□□□ -0.74
HMG20B-211ENST00000486028 DCAF12L2Q5VW00 463 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 TMEM42Q69YG0 159 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 WDR82Q6UXN9 313 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 TMPRSS11AQ6ZMR5 421 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 RDH10Q8IZV5 341 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 GCSAMQ8N6F7 178 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 SCCPDHQ8NBX0 429 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 OR8B3Q8NGG8 313 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 OR10Z1Q8NGY1 313 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 HAVCR2Q8TDQ0 301 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 TFAP2CQ92754 450 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 RPL3LQ92901 407 aaKnown RBP10.41□□□□□ -0.74
HMG20B-211ENST00000486028 C10orf35Q96D05 121 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 OR8B2Q96RD0 313 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 JAM3Q9BX67 310 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 FGF23Q9GZV9 251 aaPredicted RBP10.41□□□□□ -0.74
HMG20B-211ENST00000486028 OR51I2Q9H344 312 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 ISG20L2Q9H9L3 353 aaKnown RBP10.41□□□□□ -0.74
HMG20B-211ENST00000486028 PLEKHA1Q9HB21 404 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 POLR3KQ9Y2Y1 108 aaPredicted RBP10.41□□□□□ -0.74
HMG20B-211ENST00000486028 WNK2Q9Y3S1 2297 aa10.41□□□□□ -0.74
HMG20B-211ENST00000486028 A0A087WXM4 84 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 LOC107986453A0A1B0GWG9 222 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 EFCAB10A6NFE3 127 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 A6NIN4 97 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 H3BSH0 61 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 PHF1O43189 567 aaPredicted RBP10.4□□□□□ -0.74
HMG20B-211ENST00000486028 PFDN1O60925 122 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 IFNA2P01563 188 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 ISG15P05161 165 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 MUC1P15941 1255 aaPredicted RBP10.4□□□□□ -0.74
HMG20B-211ENST00000486028 MYL12AP19105 171 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 PITPNBP48739 271 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 GNB2P62879 340 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 HOXA4Q00056 320 aaPredicted RBP10.4□□□□□ -0.74
HMG20B-211ENST00000486028 ALKBH1Q13686 389 aaKnown RBP10.4□□□□□ -0.74
HMG20B-211ENST00000486028 MICBQ29980 383 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 TEX36Q5VZQ5 186 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 LYPD2Q6UXB3 125 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 IL17RELQ6ZVW7 336 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 ZNF573Q86YE8 665 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 TEX29Q8N6K0 151 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 ZNF676Q8N7Q3 588 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 ZNF671Q8TAW3 534 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 ZNF649Q9BS31 505 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 SSBP3Q9BWW4 388 aaPredicted RBP10.4□□□□□ -0.74
HMG20B-211ENST00000486028 YTHDF1Q9BYJ9 559 aaKnown RBP10.4□□□□□ -0.74
HMG20B-211ENST00000486028 GPR173Q9NS66 373 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 OR5V1Q9UGF6 321 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 SLC7A11Q9UPY5 501 aa10.4□□□□□ -0.74
HMG20B-211ENST00000486028 EXOSC1Q9Y3B2 195 aaKnown RBP10.4□□□□□ -0.74
HMG20B-211ENST00000486028 ANKRD61A6NGH8 418 aa10.39□□□□□ -0.75
HMG20B-211ENST00000486028 OR4C45A6NMZ5 311 aa10.39□□□□□ -0.75
HMG20B-211ENST00000486028 A8MXK9 166 aa10.39□□□□□ -0.75
HMG20B-211ENST00000486028 TNFRSF13BO14836 293 aaPredicted RBP10.39□□□□□ -0.75
HMG20B-211ENST00000486028 ADAM20O43506 726 aa10.39□□□□□ -0.75
HMG20B-211ENST00000486028 GATBO75879 557 aaKnown RBP10.39□□□□□ -0.75
HMG20B-211ENST00000486028 GYPAP02724 150 aa10.39□□□□□ -0.75
HMG20B-211ENST00000486028 CCDC159P0C7I6 412 aa10.39□□□□□ -0.75
HMG20B-211ENST00000486028 LIMS3P0CW19 117 aa10.39□□□□□ -0.75
HMG20B-211ENST00000486028 LIMS4P0CW20 117 aa10.39□□□□□ -0.75
HMG20B-211ENST00000486028 EGR1P18146 543 aa10.39□□□□□ -0.75
HMG20B-211ENST00000486028 MYF6P23409 242 aa10.39□□□□□ -0.75
HMG20B-211ENST00000486028 ETV1P50549 477 aa10.39□□□□□ -0.75
HMG20B-211ENST00000486028 NANOS3P60323 173 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms