RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 YY1AP1Q9H869 796 aa15.69■□□□□ 0.1
COL27A1-205ENST00000485397 FBLN5Q9UBX5 448 aa15.69■□□□□ 0.1
COL27A1-205ENST00000485397 LAMP5Q9UJQ1 280 aa15.69■□□□□ 0.1
COL27A1-205ENST00000485397 SF3B6Q9Y3B4 125 aaKnown RBP15.69■□□□□ 0.1
COL27A1-205ENST00000485397 GNGT2O14610 69 aa15.68■□□□□ 0.1
COL27A1-205ENST00000485397 T-ENOLP0DO92 83 aa15.68■□□□□ 0.1
COL27A1-205ENST00000485397 PRKACGP22612 351 aa15.68■□□□□ 0.1
COL27A1-205ENST00000485397 SLC2A5P22732 501 aa15.68■□□□□ 0.1
COL27A1-205ENST00000485397 GABRA5P31644 462 aa15.68■□□□□ 0.1
COL27A1-205ENST00000485397 C2orf68Q2NKX9 166 aa15.68■□□□□ 0.1
COL27A1-205ENST00000485397 TMEM236Q5W0B7 351 aa15.68■□□□□ 0.1
COL27A1-205ENST00000485397 MOB3CQ70IA8 216 aa15.68■□□□□ 0.1
COL27A1-205ENST00000485397 KRT74Q7RTS7 529 aa15.68■□□□□ 0.1
COL27A1-205ENST00000485397 PPP1R35Q8TAP8 253 aa15.68■□□□□ 0.1
COL27A1-205ENST00000485397 ZNF671Q8TAW3 534 aa15.68■□□□□ 0.1
COL27A1-205ENST00000485397 CANT1Q8WVQ1 401 aa15.68■□□□□ 0.1
COL27A1-205ENST00000485397 AQP3Q92482 292 aa15.68■□□□□ 0.1
COL27A1-205ENST00000485397 AJUBAQ96IF1 538 aa15.68■□□□□ 0.1
COL27A1-205ENST00000485397 SSX3Q99909 188 aa15.68■□□□□ 0.1
COL27A1-205ENST00000485397 C19orf12Q9NSK7 152 aa15.68■□□□□ 0.1
COL27A1-205ENST00000485397 FAM206AQ9NX38 181 aa15.68■□□□□ 0.1
COL27A1-205ENST00000485397 TMEM269A0A1B0GVZ9 245 aa15.67■□□□□ 0.1
COL27A1-205ENST00000485397 PRR32B1ATL7 298 aa15.67■□□□□ 0.1
COL27A1-205ENST00000485397 ANGPTL7O43827 346 aa15.67■□□□□ 0.1
COL27A1-205ENST00000485397 CSF1P09603 554 aa15.67■□□□□ 0.1
COL27A1-205ENST00000485397 CAPZA1P52907 286 aa15.67■□□□□ 0.1
COL27A1-205ENST00000485397 APOFQ13790 326 aa15.67■□□□□ 0.1
COL27A1-205ENST00000485397 CEACAM21Q3KPI0 293 aa15.67■□□□□ 0.1
COL27A1-205ENST00000485397 HAGHLQ6PII5 290 aaPredicted RBP15.67■□□□□ 0.1
COL27A1-205ENST00000485397 TRPM8Q7Z2W7 1104 aa15.67■□□□□ 0.1
COL27A1-205ENST00000485397 MKXQ8IYA7 352 aa15.67■□□□□ 0.1
COL27A1-205ENST00000485397 OR5A2Q8NGI9 324 aa15.67■□□□□ 0.1
COL27A1-205ENST00000485397 OR5D13Q8NGL4 314 aa15.67■□□□□ 0.1
COL27A1-205ENST00000485397 PPP1R14AQ96A00 147 aa15.67■□□□□ 0.1
COL27A1-205ENST00000485397 SDSLQ96GA7 329 aa15.67■□□□□ 0.1
COL27A1-205ENST00000485397 ZNF488Q96MN9 340 aa15.67■□□□□ 0.1
COL27A1-205ENST00000485397 TRBV23-1A0A0A0MS06 115 aa15.66■□□□□ 0.1
COL27A1-205ENST00000485397 A0A0U1RQV5 110 aa15.66■□□□□ 0.1
COL27A1-205ENST00000485397 MRPL3P09001 348 aaKnown RBP15.66■□□□□ 0.1
COL27A1-205ENST00000485397 CALB2P22676 271 aa15.66■□□□□ 0.1
COL27A1-205ENST00000485397 THAP5Q7Z6K1 395 aa15.66■□□□□ 0.1
COL27A1-205ENST00000485397 COMMD2Q86X83 199 aa15.66■□□□□ 0.1
COL27A1-205ENST00000485397 CD177Q8N6Q3 437 aa15.66■□□□□ 0.1
COL27A1-205ENST00000485397 OR51G2Q8NGK0 314 aa15.66■□□□□ 0.1
COL27A1-205ENST00000485397 OR51E1Q8TCB6 317 aa15.66■□□□□ 0.1
COL27A1-205ENST00000485397 TTTY10Q9BZA0 68 aa15.66■□□□□ 0.1
COL27A1-205ENST00000485397 YIPF3Q9GZM5 350 aa15.66■□□□□ 0.1
COL27A1-205ENST00000485397 PBOV1Q9GZY1 135 aa15.66■□□□□ 0.1
COL27A1-205ENST00000485397 ZNF556Q9HAH1 456 aa15.66■□□□□ 0.1
COL27A1-205ENST00000485397 GPR84Q9NQS5 396 aa15.66■□□□□ 0.1
COL27A1-205ENST00000485397 FOXJ3Q9UPW0 622 aa15.66■□□□□ 0.1
COL27A1-205ENST00000485397 ACOD1A6NK06 481 aa15.65■□□□□ 0.1
COL27A1-205ENST00000485397 OR5B21A6NL26 309 aa15.65■□□□□ 0.1
COL27A1-205ENST00000485397 RFPL4AA6NLU0 287 aa15.65■□□□□ 0.1
COL27A1-205ENST00000485397 RFPL4AL1F8VTS6 287 aa15.65■□□□□ 0.1
COL27A1-205ENST00000485397 E2F6O75461 281 aa15.65■□□□□ 0.1
COL27A1-205ENST00000485397 MTRF1O75570 445 aaKnown RBP15.65■□□□□ 0.1
COL27A1-205ENST00000485397 IGLV3-1P01715 115 aa15.65■□□□□ 0.1
COL27A1-205ENST00000485397 FAHP16930 419 aa15.65■□□□□ 0.1
COL27A1-205ENST00000485397 RIPPLY1Q0D2K3 151 aa15.65■□□□□ 0.1
COL27A1-205ENST00000485397 HERPUD1Q15011 391 aa15.65■□□□□ 0.1
COL27A1-205ENST00000485397 PLCXD3Q63HM9 321 aa15.65■□□□□ 0.1
COL27A1-205ENST00000485397 KCTD18Q6PI47 426 aaPredicted RBP15.65■□□□□ 0.1
COL27A1-205ENST00000485397 ACP7Q6ZNF0 438 aa15.65■□□□□ 0.1
COL27A1-205ENST00000485397 C11orf44Q8N8P7 122 aa15.65■□□□□ 0.1
COL27A1-205ENST00000485397 TEAD3Q99594 435 aa15.65■□□□□ 0.1
COL27A1-205ENST00000485397 MEGF9Q9H1U4 602 aa15.65■□□□□ 0.1
COL27A1-205ENST00000485397 SLC25A19Q9HC21 320 aa15.65■□□□□ 0.1
COL27A1-205ENST00000485397 TVP23BQ9NYZ1 205 aa15.65■□□□□ 0.1
COL27A1-205ENST00000485397 COPS3Q9UNS2 423 aa15.65■□□□□ 0.1
COL27A1-205ENST00000485397 PIGLQ9Y2B2 252 aa15.65■□□□□ 0.1
COL27A1-205ENST00000485397 CCDC182A6NF36 153 aa15.64■□□□□ 0.09
COL27A1-205ENST00000485397 AQP12BA6NM10 295 aa15.64■□□□□ 0.09
COL27A1-205ENST00000485397 GSC2O15499 205 aa15.64■□□□□ 0.09
COL27A1-205ENST00000485397 SYNGR1O43759 233 aa15.64■□□□□ 0.09
COL27A1-205ENST00000485397 ATP6V1B1P15313 513 aa15.64■□□□□ 0.09
COL27A1-205ENST00000485397 KIR2DS4P43632 304 aa15.64■□□□□ 0.09
COL27A1-205ENST00000485397 CEBPDP49716 269 aaPredicted RBP15.64■□□□□ 0.09
COL27A1-205ENST00000485397 EFNB2P52799 333 aa15.64■□□□□ 0.09
COL27A1-205ENST00000485397 ERVFRD-1P60508 538 aa15.64■□□□□ 0.09
COL27A1-205ENST00000485397 SNAPC1Q16533 368 aa15.64■□□□□ 0.09
COL27A1-205ENST00000485397 LRRC75BQ2VPJ9 315 aa15.64■□□□□ 0.09
COL27A1-205ENST00000485397 TET2Q6N021 2002 aaPredicted RBP15.64■□□□□ 0.09
COL27A1-205ENST00000485397 DEGS2Q6QHC5 323 aa15.64■□□□□ 0.09
COL27A1-205ENST00000485397 Q6ZTK2 550 aa15.64■□□□□ 0.09
COL27A1-205ENST00000485397 AQP12AQ8IXF9 295 aa15.64■□□□□ 0.09
COL27A1-205ENST00000485397 C11orf42Q8N5U0 333 aa15.64■□□□□ 0.09
COL27A1-205ENST00000485397 POC1AQ8NBT0 407 aa15.64■□□□□ 0.09
COL27A1-205ENST00000485397 OR8B4Q96RC9 309 aa15.64■□□□□ 0.09
COL27A1-205ENST00000485397 THTPAQ9BU02 230 aa15.64■□□□□ 0.09
COL27A1-205ENST00000485397 MROQ9BYG7 248 aa15.64■□□□□ 0.09
COL27A1-205ENST00000485397 FAM234AQ9H0X4 552 aa15.64■□□□□ 0.09
COL27A1-205ENST00000485397 RASL12Q9NYN1 266 aa15.64■□□□□ 0.09
COL27A1-205ENST00000485397 ANXA8P13928 327 aa15.63■□□□□ 0.09
COL27A1-205ENST00000485397 PRDX2P32119 198 aa15.63■□□□□ 0.09
COL27A1-205ENST00000485397 MFGE8Q08431 387 aaPredicted RBP15.63■□□□□ 0.09
COL27A1-205ENST00000485397 TMEM200BQ69YZ2 307 aa15.63■□□□□ 0.09
COL27A1-205ENST00000485397 CRIP3Q6Q6R5 217 aa15.63■□□□□ 0.09
COL27A1-205ENST00000485397 BATF2Q8N1L9 274 aa15.63■□□□□ 0.09
COL27A1-205ENST00000485397 OR4M1Q8NGD0 313 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms