RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 GPR173Q9NS66 373 aa13.07□□□□□ -0.32
RPP40-206ENST00000483546 CDC42EP3Q9UKI2 254 aa13.07□□□□□ -0.32
RPP40-206ENST00000483546 ERGIC3Q9Y282 383 aa13.07□□□□□ -0.32
RPP40-206ENST00000483546 POLDIP2Q9Y2S7 368 aa13.07□□□□□ -0.32
RPP40-206ENST00000483546 POLR3KQ9Y2Y1 108 aaPredicted RBP13.07□□□□□ -0.32
RPP40-206ENST00000483546 FN1P02751 2386 aaKnown RBP13.07□□□□□ -0.32
RPP40-206ENST00000483546 SONP18583 2426 aaKnown RBP13.06□□□□□ -0.32
RPP40-206ENST00000483546 PQLC2LA1A4F0 135 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 INAFM1C9JVW0 142 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 E9PI62 339 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 OGG1O15527 345 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 CDK1P06493 297 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 WNT2P09544 360 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 HNF1AP20823 631 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 NPY4RP50391 375 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 FUT6P51993 359 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 C11orf91Q3C1V1 193 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 FAM201AQ5SY85 155 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 TEX29Q8N6K0 151 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 ZNF485Q8NCK3 441 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 OR13C3Q8NGS6 347 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 RPL3LQ92901 407 aaKnown RBP13.06□□□□□ -0.32
RPP40-206ENST00000483546 SMIM19Q96E16 107 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 ZNF184Q99676 751 aaPredicted RBP13.06□□□□□ -0.32
RPP40-206ENST00000483546 PKIBQ9C010 78 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 DNTTIP1Q9H147 329 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 RASSF4Q9H2L5 321 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 ERVK-18Q9QC07 812 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 CLEC2DQ9UHP7 191 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 BLOC1S6Q9UL45 172 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 PCDHGB5Q9Y5G0 923 aa13.06□□□□□ -0.32
RPP40-206ENST00000483546 J3QLI3 93 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 J3QT63 122 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 PLPP2O43688 288 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 RRP9O43818 475 aaKnown RBP13.05□□□□□ -0.32
RPP40-206ENST00000483546 CRLF1O75462 422 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 ALX3O95076 343 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 ZNF205O95201 554 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 ACAA1P09110 424 aaPredicted RBP13.05□□□□□ -0.32
RPP40-206ENST00000483546 PRKACBP22694 351 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 MPZP25189 248 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 C21orf33P30042 268 aaPredicted RBP13.05□□□□□ -0.32
RPP40-206ENST00000483546 WNT4P56705 351 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 SLC35A2P78381 396 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 HNRNPA0Q13151 305 aaKnown RBP13.05□□□□□ -0.32
RPP40-206ENST00000483546 UBE2V2Q15819 145 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 HAGHLQ6PII5 290 aaPredicted RBP13.05□□□□□ -0.32
RPP40-206ENST00000483546 BOLLQ8N9W6 283 aaKnown RBP13.05□□□□□ -0.32
RPP40-206ENST00000483546 GATAD2BQ8WXI9 593 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 AQP3Q92482 292 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 SPSB1Q96BD6 273 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 ADAT3Q96EY9 351 aaPredicted RBP13.05□□□□□ -0.32
RPP40-206ENST00000483546 BORCS8Q96FH0 119 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 PDCD1LG2Q9BQ51 273 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 MND1Q9BWT6 205 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 SSBP3Q9BWW4 388 aaPredicted RBP13.05□□□□□ -0.32
RPP40-206ENST00000483546 CDCA4Q9BXL8 241 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 HIF1ANQ9NWT6 349 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 RASL12Q9NYN1 266 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 KAAG1Q9UBP8 84 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 DHDHQ9UQ10 334 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 WNK2Q9Y3S1 2297 aa13.05□□□□□ -0.32
RPP40-206ENST00000483546 A0A0G2JMP0 313 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 A0A0X1KG70 313 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 A6NIN4 97 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 C3orf80F5H4A9 247 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 H3BSH0 61 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 TNFRSF13BO14836 293 aaPredicted RBP13.04□□□□□ -0.32
RPP40-206ENST00000483546 NOS1APO75052 506 aaPredicted RBP13.04□□□□□ -0.32
RPP40-206ENST00000483546 MT-ND2P03891 347 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 CD2P06729 351 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 EGR1P18146 543 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 ATF1P18846 271 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 CD80P33681 288 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 HAAOP46952 286 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 GTF2A1P52655 376 aaPredicted RBP13.04□□□□□ -0.32
RPP40-206ENST00000483546 GNB2P62879 340 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 BDH1Q02338 343 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 CHRFAM7AQ494W8 412 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 DMKNQ6E0U4 476 aaPredicted RBP13.04□□□□□ -0.32
RPP40-206ENST00000483546 SFRP4Q6FHJ7 346 aaPredicted RBP13.04□□□□□ -0.32
RPP40-206ENST00000483546 FAM90A1Q86YD7 464 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 SERPINA12Q8IW75 414 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 PARP16Q8N5Y8 322 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 NANOGP1Q8N7R0 232 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 DEFB108BQ8NET1 73 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 OR4M2Q8NGB6 313 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 OR5D14Q8NGL3 314 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 GPR148Q8TDV2 347 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 TSEN15Q8WW01 171 aaKnown RBP13.04□□□□□ -0.32
RPP40-206ENST00000483546 FGGYQ96C11 551 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 SHARPINQ9H0F6 387 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 DUSP21Q9H596 190 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 METTL17Q9H7H0 456 aaPredicted RBP13.04□□□□□ -0.32
RPP40-206ENST00000483546 OR5V1Q9UGF6 321 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 ZNF281Q9Y2X9 895 aa13.04□□□□□ -0.32
RPP40-206ENST00000483546 C2CD3Q4AC94 2353 aa13.03□□□□□ -0.32
RPP40-206ENST00000483546 PTGES3LE9PB15 166 aa13.03□□□□□ -0.32
RPP40-206ENST00000483546 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.03□□□□□ -0.32
RPP40-206ENST00000483546 CD1AP06126 327 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms