RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 C1QL2Q7Z5L3 287 aa14.99□□□□□ -0.01
HDAC6-225ENST00000483506 HAVCR2Q8TDQ0 301 aa14.99□□□□□ -0.01
HDAC6-225ENST00000483506 CHST5Q9GZS9 411 aa14.99□□□□□ -0.01
HDAC6-225ENST00000483506 C7orf69Q9H7B7 122 aa14.99□□□□□ -0.01
HDAC6-225ENST00000483506 IGHV2-70DA0A0C4DH43 119 aa14.98□□□□□ -0.01
HDAC6-225ENST00000483506 ANKRD61A6NGH8 418 aa14.98□□□□□ -0.01
HDAC6-225ENST00000483506 OR4C45A6NMZ5 311 aa14.98□□□□□ -0.01
HDAC6-225ENST00000483506 GYPAP02724 150 aa14.98□□□□□ -0.01
HDAC6-225ENST00000483506 GNAO1P09471 354 aa14.98□□□□□ -0.01
HDAC6-225ENST00000483506 LIMS3P0CW19 117 aa14.98□□□□□ -0.01
HDAC6-225ENST00000483506 LIMS4P0CW20 117 aa14.98□□□□□ -0.01
HDAC6-225ENST00000483506 DCKP27707 260 aa14.98□□□□□ -0.01
HDAC6-225ENST00000483506 SRP14P37108 136 aaKnown RBP14.98□□□□□ -0.01
HDAC6-225ENST00000483506 PAX8Q06710 450 aa14.98□□□□□ -0.01
HDAC6-225ENST00000483506 ALKBH1Q13686 389 aaKnown RBP14.98□□□□□ -0.01
HDAC6-225ENST00000483506 ATPAF1Q5TC12 328 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-225ENST00000483506 STUMQ69YW2 141 aa14.98□□□□□ -0.01
HDAC6-225ENST00000483506 AQP3Q92482 292 aa14.98□□□□□ -0.01
HDAC6-225ENST00000483506 TFAP2CQ92754 450 aa14.98□□□□□ -0.01
HDAC6-225ENST00000483506 TECTBQ96PL2 329 aa14.98□□□□□ -0.01
HDAC6-225ENST00000483506 DNTTIP1Q9H147 329 aa14.98□□□□□ -0.01
HDAC6-225ENST00000483506 ISG20L2Q9H9L3 353 aaKnown RBP14.98□□□□□ -0.01
HDAC6-225ENST00000483506 PLEKHA1Q9HB21 404 aa14.98□□□□□ -0.01
HDAC6-225ENST00000483506 GPR173Q9NS66 373 aa14.98□□□□□ -0.01
HDAC6-225ENST00000483506 ERVK-18Q9QC07 812 aa14.98□□□□□ -0.01
HDAC6-225ENST00000483506 FBN1P35555 2871 aaKnown RBP14.98□□□□□ -0.01
HDAC6-225ENST00000483506 LOC105371242A0A075B767 164 aa14.97□□□□□ -0.01
HDAC6-225ENST00000483506 IGHV3OR15-7A0A075B7D8 119 aa14.97□□□□□ -0.01
HDAC6-225ENST00000483506 H0YJX3 145 aa14.97□□□□□ -0.01
HDAC6-225ENST00000483506 ADAM20O43506 726 aa14.97□□□□□ -0.01
HDAC6-225ENST00000483506 FCN3O75636 299 aa14.97□□□□□ -0.01
HDAC6-225ENST00000483506 RHBDL1O75783 438 aa14.97□□□□□ -0.01
HDAC6-225ENST00000483506 PPIAL4GP0DN37 164 aa14.97□□□□□ -0.01
HDAC6-225ENST00000483506 MPZP25189 248 aa14.97□□□□□ -0.01
HDAC6-225ENST00000483506 TGM4P49221 684 aa14.97□□□□□ -0.01
HDAC6-225ENST00000483506 ZNF573Q86YE8 665 aa14.97□□□□□ -0.01
HDAC6-225ENST00000483506 RDH10Q8IZV5 341 aa14.97□□□□□ -0.01
HDAC6-225ENST00000483506 C8orf59Q8N0T1 100 aaPredicted RBP14.97□□□□□ -0.01
HDAC6-225ENST00000483506 ZNF671Q8TAW3 534 aa14.97□□□□□ -0.01
HDAC6-225ENST00000483506 NRG4Q8WWG1 115 aa14.97□□□□□ -0.01
HDAC6-225ENST00000483506 RAB40AQ8WXH6 277 aa14.97□□□□□ -0.01
HDAC6-225ENST00000483506 PP6455Q8WZ26 134 aa14.97□□□□□ -0.01
HDAC6-225ENST00000483506 WDR13Q9H1Z4 485 aa14.97□□□□□ -0.01
HDAC6-225ENST00000483506 DIMT1Q9UNQ2 313 aaKnown RBP14.97□□□□□ -0.01
HDAC6-225ENST00000483506 COL6A5A8TX70 2615 aa14.96□□□□□ -0.01
HDAC6-225ENST00000483506 KIR2DS1A0A191URI9 304 aa14.96□□□□□ -0.01
HDAC6-225ENST00000483506 A6NIN4 97 aa14.96□□□□□ -0.01
HDAC6-225ENST00000483506 J3QT63 122 aa14.96□□□□□ -0.01
HDAC6-225ENST00000483506 AKR7A2O43488 359 aa14.96□□□□□ -0.01
HDAC6-225ENST00000483506 NOS1APO75052 506 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-225ENST00000483506 GATBO75879 557 aaKnown RBP14.96□□□□□ -0.01
HDAC6-225ENST00000483506 RPSAP08865 295 aaKnown RBP14.96□□□□□ -0.01
HDAC6-225ENST00000483506 PIPP12273 146 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-225ENST00000483506 SCGB2A2Q13296 93 aa14.96□□□□□ -0.01
HDAC6-225ENST00000483506 UBE2V2Q15819 145 aa14.96□□□□□ -0.01
HDAC6-225ENST00000483506 DMRTC1Q5HYR2 192 aa14.96□□□□□ -0.01
HDAC6-225ENST00000483506 LAIR2Q6ISS4 152 aa14.96□□□□□ -0.01
HDAC6-225ENST00000483506 HAGHLQ6PII5 290 aaPredicted RBP14.96□□□□□ -0.01
HDAC6-225ENST00000483506 NANPQ8TBE9 248 aa14.96□□□□□ -0.01
HDAC6-225ENST00000483506 SEH1LQ96EE3 360 aa14.96□□□□□ -0.01
HDAC6-225ENST00000483506 SMURF1Q9HCE7 757 aa14.96□□□□□ -0.01
HDAC6-225ENST00000483506 HHLA2Q9UM44 414 aa14.96□□□□□ -0.01
HDAC6-225ENST00000483506 C22orf46C9J442 243 aa14.95□□□□□ -0.02
HDAC6-225ENST00000483506 ACAA1P09110 424 aaPredicted RBP14.95□□□□□ -0.02
HDAC6-225ENST00000483506 AMY2BP19961 511 aa14.95□□□□□ -0.02
HDAC6-225ENST00000483506 HAAOP46952 286 aa14.95□□□□□ -0.02
HDAC6-225ENST00000483506 CD276Q5ZPR3 534 aa14.95□□□□□ -0.02
HDAC6-225ENST00000483506 BTNL3Q6UXE8 466 aa14.95□□□□□ -0.02
HDAC6-225ENST00000483506 UTS2BQ765I0 119 aa14.95□□□□□ -0.02
HDAC6-225ENST00000483506 SLC36A1Q7Z2H8 476 aa14.95□□□□□ -0.02
HDAC6-225ENST00000483506 POC1AQ8NBT0 407 aa14.95□□□□□ -0.02
HDAC6-225ENST00000483506 ANGPTL6Q8NI99 470 aa14.95□□□□□ -0.02
HDAC6-225ENST00000483506 RPS4Y2Q8TD47 263 aa14.95□□□□□ -0.02
HDAC6-225ENST00000483506 ADAT3Q96EY9 351 aaPredicted RBP14.95□□□□□ -0.02
HDAC6-225ENST00000483506 MRI1Q9BV20 369 aa14.95□□□□□ -0.02
HDAC6-225ENST00000483506 PKIBQ9C010 78 aa14.95□□□□□ -0.02
HDAC6-225ENST00000483506 PLCXD1Q9NUJ7 323 aa14.95□□□□□ -0.02
HDAC6-225ENST00000483506 RASL12Q9NYN1 266 aa14.95□□□□□ -0.02
HDAC6-225ENST00000483506 METRNQ9UJH8 293 aa14.95□□□□□ -0.02
HDAC6-225ENST00000483506 CAB39Q9Y376 341 aaPredicted RBP14.95□□□□□ -0.02
HDAC6-225ENST00000483506 AUP1Q9Y679 476 aa14.95□□□□□ -0.02
HDAC6-225ENST00000483506 TMEM212A6NML5 194 aa14.94□□□□□ -0.02
HDAC6-225ENST00000483506 E9PI62 339 aa14.94□□□□□ -0.02
HDAC6-225ENST00000483506 H3BSH0 61 aa14.94□□□□□ -0.02
HDAC6-225ENST00000483506 DVL1O14640 695 aa14.94□□□□□ -0.02
HDAC6-225ENST00000483506 TMPRSS2O15393 492 aa14.94□□□□□ -0.02
HDAC6-225ENST00000483506 ENSAO43768 121 aaKnown RBP14.94□□□□□ -0.02
HDAC6-225ENST00000483506 SERPINA3P01011 423 aa14.94□□□□□ -0.02
HDAC6-225ENST00000483506 CCDC159P0C7I6 412 aa14.94□□□□□ -0.02
HDAC6-225ENST00000483506 PGA5P0DJD9 388 aa14.94□□□□□ -0.02
HDAC6-225ENST00000483506 ADRA2CP18825 462 aa14.94□□□□□ -0.02
HDAC6-225ENST00000483506 GLRA1P23415 457 aa14.94□□□□□ -0.02
HDAC6-225ENST00000483506 ETV1P50549 477 aa14.94□□□□□ -0.02
HDAC6-225ENST00000483506 FUT6P51993 359 aa14.94□□□□□ -0.02
HDAC6-225ENST00000483506 GBX2P52951 348 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-225ENST00000483506 CCDC58Q4VC31 144 aa14.94□□□□□ -0.02
HDAC6-225ENST00000483506 ZNF788Q6ZQV5 615 aa14.94□□□□□ -0.02
HDAC6-225ENST00000483506 DNAAF1Q8NEP3 725 aa14.94□□□□□ -0.02
HDAC6-225ENST00000483506 OR10AC1Q8NH08 325 aa14.94□□□□□ -0.02
HDAC6-225ENST00000483506 CCL13Q99616 98 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms