RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 RPS19BP1Q86WX3 136 aaKnown RBP6.75□□□□□ -1.33
SNX13-208ENST00000482558 SLC22A24Q8N4F4 322 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 TMEM156Q8N614 296 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 WDSUB1Q8N9V3 476 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 TMEM229BQ8NBD8 167 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 OR1J4Q8NGS1 313 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 FAM110DQ8TAY7 271 aaPredicted RBP6.75□□□□□ -1.33
SNX13-208ENST00000482558 C11orf40Q8WZ69 217 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 SLAMF6Q96DU3 332 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 GUCD1Q96NT3 240 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 FYTTD1Q96QD9 318 aaKnown RBP6.75□□□□□ -1.33
SNX13-208ENST00000482558 OR5B2Q96R09 309 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 AMELYQ99218 206 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 KLHDC3Q9BQ90 382 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 SLC25A21Q9BQT8 299 aaPredicted RBP6.75□□□□□ -1.33
SNX13-208ENST00000482558 DPCDQ9BVM2 203 aaPredicted RBP6.75□□□□□ -1.33
SNX13-208ENST00000482558 DDA1Q9BW61 102 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 NOX3Q9HBY0 568 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 SH2D2AQ9NP31 389 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 TMEM138Q9NPI0 162 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 B3GAT1Q9P2W7 334 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 GHRLQ9UBU3 117 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 UBQLN2Q9UHD9 624 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 POLR1DQ9Y2S0 133 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 NPTNQ9Y639 398 aa6.75□□□□□ -1.33
SNX13-208ENST00000482558 SPTBN5Q9NRC6 3674 aaKnown RBP6.75□□□□□ -1.33
SNX13-208ENST00000482558 ASCC3Q8N3C0 2202 aaKnown RBP6.74□□□□□ -1.33
SNX13-208ENST00000482558 TRAV6A0A075B6T7 132 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 A6NIN4 97 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 CGB1A6NKQ9 187 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 SYT7O43581 403 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 TRAF3IP2O43734 574 aaPredicted RBP6.74□□□□□ -1.33
SNX13-208ENST00000482558 ZNF354AO60765 605 aaPredicted RBP6.74□□□□□ -1.33
SNX13-208ENST00000482558 RGS11O94810 467 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 HPP00738 406 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 MT-ND4P03905 459 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 ALDOBP05062 364 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 UMODP07911 640 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 HLA-DOBP13765 273 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 LIFP15018 202 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 RAB3AP20336 220 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 SRD5A2P31213 254 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 ZNF84P51523 738 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 P2RY4P51582 365 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 H3F3AP84243 136 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 ECH1Q13011 328 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 MADCAM1Q13477 382 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 ICAM4Q14773 271 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 SF3B4Q15427 424 aaKnown RBP eCLIP6.74□□□□□ -1.334e-8■■■■□ 20.1
SNX13-208ENST00000482558 FCN2Q15485 313 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 ETFDHQ16134 617 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 TMEM176BQ3YBM2 270 aaPredicted RBP6.74□□□□□ -1.33
SNX13-208ENST00000482558 PDSS1Q5T2R2 415 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 OR2W3Q7Z3T1 314 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 DEFB123Q8N688 67 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 GJC3Q8NFK1 279 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 OR51D1Q8NGF3 324 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 OR6N1Q8NGY5 312 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 LILRB4Q8NHJ6 448 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 AKR7LQ8NHP1 331 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 GPX8Q8TED1 209 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 SLC25A28Q96A46 364 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 CPNE2Q96FN4 548 aaPredicted RBP6.74□□□□□ -1.33
SNX13-208ENST00000482558 ASCL2Q99929 193 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 PBOV1Q9GZY1 135 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 ATG5Q9H1Y0 275 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 KCNK15Q9H427 330 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 METTL17Q9H7H0 456 aaPredicted RBP6.74□□□□□ -1.33
SNX13-208ENST00000482558 SEC61A2Q9H9S3 476 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 APMAPQ9HDC9 416 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 MYOZ1Q9NP98 299 aaPredicted RBP6.74□□□□□ -1.33
SNX13-208ENST00000482558 FAM206AQ9NX38 181 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 MED29Q9NX70 200 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 ZNF222Q9UK12 451 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 DKKL1Q9UK85 242 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 SLC22A13Q9Y226 551 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 FAM96BQ9Y3D0 163 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 HS3ST3B1Q9Y662 390 aa6.74□□□□□ -1.33
SNX13-208ENST00000482558 TRIOBPQ9H2D6 2365 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 RALGAPA1Q6GYQ0 2036 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 TRAV18A0A075B6X5 111 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 TMEM272A0A1B0GTI8 110 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 CIB4A0PJX0 185 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 PMS2P1A4D2B8 440 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 MFSD2BA6NFX1 497 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 DHRS7CA6NNS2 312 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 NPIPB11E5RHQ5 1161 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 NPIPA2E9PIF3 369 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 NPIPA3F8WFD2 350 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 FABP7O15540 132 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 EFNA2O43921 213 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 RHBDL1O75783 438 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 GPANK1O95872 356 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 CYB5AP00167 134 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 P04436 131 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 GIPP09681 153 aaPredicted RBP6.73□□□□□ -1.33
SNX13-208ENST00000482558 ACSM4P0C7M7 580 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 MSR1P21757 451 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 CCL1P22362 96 aa6.73□□□□□ -1.33
SNX13-208ENST00000482558 MPZP25189 248 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms