RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 PDCD1Q15116 288 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 OR51A4Q8NGJ6 313 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 OR6K3Q8NGY3 331 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 CMBLQ96DG6 245 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 RRNAD1Q96FB5 475 aaKnown RBP10.04□□□□□ -0.8
SMPD4-218ENST00000482171 FOXB1Q99853 325 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 SPIN2AQ99865 258 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 SPIN2BQ9BPZ2 258 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 RSRP1Q9BUV0 290 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 NMNAT2Q9BZQ4 307 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 NUDT19A8MXV4 375 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 KLK10O43240 276 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 HOXD4P09016 255 aaPredicted RBP10.04□□□□□ -0.8
SMPD4-218ENST00000482171 RPA2P15927 270 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 PHLDA2Q53GA4 152 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 LINC00518Q8N0U6 118 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 FAM24BQ8N5W8 94 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 SLC38A9Q8NBW4 561 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 RNF128Q8TEB7 428 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 WNT2BQ93097 391 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 MESP1Q9BRJ9 268 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 IER2Q9BTL4 223 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 A0A1W2PQD3 144 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 TIMM8AO60220 97 aaPredicted RBP10.04□□□□□ -0.8
SMPD4-218ENST00000482171 RPL12P30050 165 aaKnown RBP10.04□□□□□ -0.8
SMPD4-218ENST00000482171 GABRA2P47869 451 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 C19orf48Q6RUI8 117 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 ISOC2Q96AB3 205 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 IP6K3Q96PC2 410 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 CHST6Q9GZX3 395 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 MMP24Q9Y5R2 645 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 THADAQ6YHU6 1953 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 LIPT2A6NK58 231 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 SLC17A2O00624 439 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 EFSO43281 561 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 JTBO76095 146 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 TMIGD3P0DMS9 266 aaPredicted RBP10.04□□□□□ -0.8
SMPD4-218ENST00000482171 CD37P11049 281 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 CCL2P13500 99 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 RBP2P50120 134 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 F2RL1P55085 397 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 MFGE8Q08431 387 aaPredicted RBP10.04□□□□□ -0.8
SMPD4-218ENST00000482171 HAGHQ16775 308 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 CLEC9AQ6UXN8 241 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 OR51F2Q8NH61 342 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 OR1S1Q8NH92 325 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 KCNE4Q8WWG9 221 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 MARVELD3Q96A59 401 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 UBL7Q96S82 380 aaPredicted RBP10.04□□□□□ -0.8
SMPD4-218ENST00000482171 FRRS1LQ9P0K9 344 aa10.04□□□□□ -0.8
SMPD4-218ENST00000482171 CTAG2O75638 210 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 SERPINE2P07093 398 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 C9orf152Q5JTZ5 239 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 DCAF12L2Q5VW00 463 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 TMEM182Q6ZP80 229 aaPredicted RBP10.03□□□□□ -0.8
SMPD4-218ENST00000482171 WDR5BQ86VZ2 330 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 TERB2Q8NHR7 220 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 REEP6Q96HR9 211 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 FAM173AQ9BQD7 235 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 ZNF286AQ9HBT8 521 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 MIOXQ9UGB7 285 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 HSPB2A8KAH6 182 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 GSTZ1O43708 216 aaPredicted RBP10.03□□□□□ -0.8
SMPD4-218ENST00000482171 CYTIPO60759 359 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 BGLAPP02818 100 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 HOXA1P49639 335 aaPredicted RBP10.03□□□□□ -0.8
SMPD4-218ENST00000482171 HSPB2Q16082 182 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 ZNF774Q6NX45 483 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 STPG2Q8N412 459 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 TOLLIPQ9H0E2 274 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 KLHDC2Q9Y2U9 406 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 SPRY1O43609 319 aaPredicted RBP10.03□□□□□ -0.8
SMPD4-218ENST00000482171 TSPAN2O60636 221 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 NXPH3O95157 252 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 HLA-HP01893 362 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 DAOP14920 347 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 RAC1P63000 192 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 FOXC1Q12948 553 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 TGIF1Q15583 401 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 CD200R1LQ6Q8B3 271 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 CMTM1Q8IZ96 169 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 FAM181AQ8N9Y4 354 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 HPSE2Q8WWQ2 592 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 RDH5Q92781 318 aa10.03□□□□□ -0.8
SMPD4-218ENST00000482171 HS3ST1O14792 307 aa10.02□□□□□ -0.8
SMPD4-218ENST00000482171 NXPH2O95156 264 aa10.02□□□□□ -0.8
SMPD4-218ENST00000482171 SCGB1D1O95968 90 aa10.02□□□□□ -0.8
SMPD4-218ENST00000482171 NRASP01111 189 aa10.02□□□□□ -0.8
SMPD4-218ENST00000482171 HLA-DQB1P01920 261 aa10.02□□□□□ -0.8
SMPD4-218ENST00000482171 TK1P04183 234 aa10.02□□□□□ -0.8
SMPD4-218ENST00000482171 CHRM2P08172 466 aa10.02□□□□□ -0.8
SMPD4-218ENST00000482171 IRF2P14316 349 aa10.02□□□□□ -0.8
SMPD4-218ENST00000482171 ZNF32P17041 273 aa10.02□□□□□ -0.8
SMPD4-218ENST00000482171 DUSP1P28562 367 aa10.02□□□□□ -0.8
SMPD4-218ENST00000482171 CEBPEQ15744 281 aa10.02□□□□□ -0.8
SMPD4-218ENST00000482171 GUCA2BQ16661 112 aa10.02□□□□□ -0.8
SMPD4-218ENST00000482171 OR51A2Q8NGJ7 313 aa10.02□□□□□ -0.8
SMPD4-218ENST00000482171 FLVCR1-AS1Q8TAF5 88 aa10.02□□□□□ -0.8
SMPD4-218ENST00000482171 INTS12Q96CB8 462 aaKnown RBP10.02□□□□□ -0.8
SMPD4-218ENST00000482171 FBXO17Q96EF6 278 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms