RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 CETN3O15182 167 aa2.88□□□□□ -1.95
SF3B1-210ENST00000482158 OR7C2O60412 319 aa2.88□□□□□ -1.95
SF3B1-210ENST00000482158 UPK1BO75841 260 aa2.88□□□□□ -1.95
SF3B1-210ENST00000482158 SMC2O95347 1197 aa2.88□□□□□ -1.95
SF3B1-210ENST00000482158 TTC4O95801 387 aa2.88□□□□□ -1.95
SF3B1-210ENST00000482158 NPPAP01160 153 aa2.88□□□□□ -1.95
SF3B1-210ENST00000482158 PRKACAP17612 351 aa2.88□□□□□ -1.95
SF3B1-210ENST00000482158 ARL2P36404 184 aa2.88□□□□□ -1.95
SF3B1-210ENST00000482158 TGFBR1P36897 503 aa2.88□□□□□ -1.95
SF3B1-210ENST00000482158 MED27Q6P2C8 311 aa2.88□□□□□ -1.95
SF3B1-210ENST00000482158 FAM184AQ8NB25 1140 aa2.88□□□□□ -1.95
SF3B1-210ENST00000482158 OR4M2Q8NGB6 313 aa2.88□□□□□ -1.95
SF3B1-210ENST00000482158 PPIL1Q9Y3C6 166 aa2.88□□□□□ -1.95
SF3B1-210ENST00000482158 KPTNQ9Y664 436 aa2.88□□□□□ -1.95
SF3B1-210ENST00000482158 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.87□□□□□ -1.95
SF3B1-210ENST00000482158 ZNF701M0R085 212 aaPredicted RBP2.87□□□□□ -1.95
SF3B1-210ENST00000482158 DFFAO00273 331 aa2.87□□□□□ -1.95
SF3B1-210ENST00000482158 YEATS4O95619 227 aa2.87□□□□□ -1.95
SF3B1-210ENST00000482158 GCGP01275 180 aa2.87□□□□□ -1.95
SF3B1-210ENST00000482158 S100A9P06702 114 aaKnown RBP2.87□□□□□ -1.95
SF3B1-210ENST00000482158 IVDP26440 423 aa2.87□□□□□ -1.95
SF3B1-210ENST00000482158 KRTAP10-1P60331 282 aa2.87□□□□□ -1.95
SF3B1-210ENST00000482158 PPP1CAP62136 330 aa2.87□□□□□ -1.95
SF3B1-210ENST00000482158 SLC35A1P78382 337 aa2.87□□□□□ -1.95
SF3B1-210ENST00000482158 MAD2L1BPQ15013 274 aaPredicted RBP2.87□□□□□ -1.95
SF3B1-210ENST00000482158 FBXO48Q5FWF7 155 aa2.87□□□□□ -1.95
SF3B1-210ENST00000482158 SPINT4Q6UDR6 99 aa2.87□□□□□ -1.95
SF3B1-210ENST00000482158 VTCN1Q7Z7D3 282 aa2.87□□□□□ -1.95
SF3B1-210ENST00000482158 SPATA24Q86W54 205 aa2.87□□□□□ -1.95
SF3B1-210ENST00000482158 ORMDL3Q8N138 153 aa2.87□□□□□ -1.95
SF3B1-210ENST00000482158 OR5M1Q8NGP8 315 aa2.87□□□□□ -1.95
SF3B1-210ENST00000482158 OR10Z1Q8NGY1 313 aa2.87□□□□□ -1.95
SF3B1-210ENST00000482158 OR8K3Q8NH51 312 aa2.87□□□□□ -1.95
SF3B1-210ENST00000482158 CHID1Q9BWS9 393 aa2.87□□□□□ -1.95
SF3B1-210ENST00000482158 ARMC7Q9H6L4 198 aa2.87□□□□□ -1.95
SF3B1-210ENST00000482158 TDRD3Q9H7E2 651 aaKnown RBP2.87□□□□□ -1.95
SF3B1-210ENST00000482158 MAP3K19Q56UN5 1328 aa2.87□□□□□ -1.95
SF3B1-210ENST00000482158 RPRD2Q5VT52 1461 aaKnown RBP2.86□□□□□ -1.95
SF3B1-210ENST00000482158 A0A1W2PRF3 423 aa2.86□□□□□ -1.95
SF3B1-210ENST00000482158 A0A1W2PRM7 423 aa2.86□□□□□ -1.95
SF3B1-210ENST00000482158 CENPXA8MT69 81 aa2.86□□□□□ -1.95
SF3B1-210ENST00000482158 CENPBD1B2RD01 187 aa2.86□□□□□ -1.95
SF3B1-210ENST00000482158 SCO1O75880 301 aa2.86□□□□□ -1.95
SF3B1-210ENST00000482158 SNAI1O95863 264 aaPredicted RBP2.86□□□□□ -1.95
SF3B1-210ENST00000482158 CRYGCP07315 174 aa2.86□□□□□ -1.95
SF3B1-210ENST00000482158 HCCSP53701 268 aa2.86□□□□□ -1.95
SF3B1-210ENST00000482158 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
SF3B1-210ENST00000482158 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
SF3B1-210ENST00000482158 TBPL2Q6SJ96 375 aa2.86□□□□□ -1.95
SF3B1-210ENST00000482158 EPGNQ6UW88 154 aa2.86□□□□□ -1.95
SF3B1-210ENST00000482158 SLC7A5P1Q8MH63 180 aa2.86□□□□□ -1.95
SF3B1-210ENST00000482158 OR51L1Q8NGJ5 315 aa2.86□□□□□ -1.95
SF3B1-210ENST00000482158 OR52N1Q8NH53 320 aa2.86□□□□□ -1.95
SF3B1-210ENST00000482158 SNF8Q96H20 258 aa2.86□□□□□ -1.95
SF3B1-210ENST00000482158 FRMD8P1Q9BZ68 369 aaPredicted RBP2.86□□□□□ -1.95
SF3B1-210ENST00000482158 KIR3DX1Q9H7L2 352 aa2.86□□□□□ -1.95
SF3B1-210ENST00000482158 LOC102724200A0A096LPH7 203 aaPredicted RBP2.85□□□□□ -1.95
SF3B1-210ENST00000482158 IGHV2OR16-5A0A0B4J2B6 119 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 A0A1W2PPV4 95 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 ISPDA4D126 451 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 GOLGA8JA6NMD2 632 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 F8VZ95 297 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 MYL12BO14950 172 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 CNMDO75829 334 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 S100A6P06703 90 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 MMP7P09237 267 aaPredicted RBP2.85□□□□□ -1.95
SF3B1-210ENST00000482158 SLC35G6P0C7Q6 338 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 GOLGA8HP0CJ92 632 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 GNRHRP30968 328 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 MPV17P39210 176 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 IDH2P48735 452 aaKnown RBP2.85□□□□□ -1.95
SF3B1-210ENST00000482158 MTPNP58546 118 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 MORN3Q6PF18 240 aaPredicted RBP2.85□□□□□ -1.95
SF3B1-210ENST00000482158 CASP12Q6UXS9 341 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 KRT222Q8N1A0 295 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 TRIML2Q8N7C3 387 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 TMEM104Q8NE00 496 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 OR2M7Q8NG81 312 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 OR1S1Q8NH92 325 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 SFXN5Q8TD22 340 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 PHF10Q8WUB8 498 aaKnown RBP2.85□□□□□ -1.95
SF3B1-210ENST00000482158 C19orf60Q96EN9 201 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 MS4A8Q9BY19 250 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 LHX5Q9H2C1 402 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 XKR8Q9H6D3 395 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 JCADQ9P266 1359 aa2.85□□□□□ -1.95
SF3B1-210ENST00000482158 SEC16AO15027 2179 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 TRAV8-6A0A0B4J262 113 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 A8MWL6 223 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 PRAMEF26H0Y7S4 382 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 J3QT63 122 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 NDUFS8O00217 210 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 MFNGO00587 321 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 GMDSO60547 372 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 TRAPPC6AO75865 159 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 CPN2P22792 545 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 PAX6P26367 422 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 PRSS3P35030 304 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 CARD18P57730 90 aa2.84□□□□□ -1.95
SF3B1-210ENST00000482158 IL15RAQ13261 267 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms