RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 UBE2NLQ5JXB2 153 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 AWAT2Q6E213 333 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 RAB12Q6IQ22 244 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 MEX3BQ6ZN04 569 aaKnown RBP8.67□□□□□ -1.02
USP39-215ENST00000481409 ANGPTL5Q86XS5 388 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 Q8IYB0 196 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 FBXL14Q8N1E6 418 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 BHLHE23Q8NDY6 225 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 TRMT10AQ8TBZ6 339 aaKnown RBP8.67□□□□□ -1.02
USP39-215ENST00000481409 HPSE2Q8WWQ2 592 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 SLC25A28Q96A46 364 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 PIK3IP1Q96FE7 263 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 CEP19Q96LK0 163 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 NUDT16L1Q9BRJ7 211 aaKnown RBP8.67□□□□□ -1.02
USP39-215ENST00000481409 MRPL37Q9BZE1 423 aaKnown RBP8.67□□□□□ -1.02
USP39-215ENST00000481409 METTL9Q9H1A3 318 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 TLNRD1Q9H1K6 362 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 ABCG5Q9H222 651 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 HMG20AQ9NP66 347 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 CISD1Q9NZ45 108 aaKnown RBP8.67□□□□□ -1.02
USP39-215ENST00000481409 TAAR3PQ9P1P4 343 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 IL19Q9UHD0 177 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 RAB22AQ9UL26 194 aa8.67□□□□□ -1.02
USP39-215ENST00000481409 MRPS28Q9Y2Q9 187 aaKnown RBP8.67□□□□□ -1.02
USP39-215ENST00000481409 FAM230AA0A1W2PPH8 454 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 FAM221AA4D161 298 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 METTL21EPA6NDL7 271 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 A6NNC1 897 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 ZNF732B4DXR9 585 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 J3QT63 122 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 M0R233 179 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 LDLRAD4O15165 306 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 RGS5O15539 181 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 TNFRSF1AP19438 455 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 CFHR2P36980 270 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 NR4A2P43354 598 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 GATA4P43694 442 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 POU3F4P49335 361 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 ZNF81P51508 661 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 ART1P52961 327 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 CAV3P56539 151 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 ARL6IP1Q15041 203 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 TESK1Q15569 626 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 C2orf76Q3KRA6 126 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 SPANXN2Q5MJ10 180 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 HES5Q5TA89 166 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 AGAP6Q5VW22 663 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 ELP2Q6IA86 826 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 VHLLQ6RSH7 139 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 Q8NFD4 153 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 OR4D6Q8NGJ1 314 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 TNFAIP8L1Q8WVP5 186 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 FBXW5Q969U6 566 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 URM1Q9BTM9 101 aaKnown RBP8.66□□□□□ -1.02
USP39-215ENST00000481409 WDR12Q9GZL7 423 aaKnown RBP8.66□□□□□ -1.02
USP39-215ENST00000481409 OR51I2Q9H344 312 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 COMMD3Q9UBI1 195 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 OR5V1Q9UGF6 321 aa8.66□□□□□ -1.02
USP39-215ENST00000481409 FAM90A10PA6NDY2 464 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 FAM90A18PA6NE21 464 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 FAM90A16PA6NEW6 464 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 FAM90A20PA6NIJ5 464 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 FAM90A8PA6NJQ4 464 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 FAM90A7PA6NKC0 464 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 C17orf100A8MU93 164 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 FAM90A22PA8MWA6 464 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 TMEM14DPA8MWL7 114 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 FAM90A12PA8MX19 464 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 FAM90A5PA8MXJ8 464 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 FAM90A23PA8MXZ1 464 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 C19orf84I3L1E1 186 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 HS3ST1O14792 307 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 MLNRO43193 412 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 SIAH2O43255 324 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 AKR7A2O43488 359 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 NOS1APO75052 506 aaPredicted RBP8.65□□□□□ -1.02
USP39-215ENST00000481409 KDM4BO94953 1096 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 CSTBP04080 98 aaKnown RBP8.65□□□□□ -1.02
USP39-215ENST00000481409 CHRM2P08172 466 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 FAM90A15PP0C7V4 464 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 FAM90A13PP0C7W8 464 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 FAM90A14PP0C7W9 464 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 FAM90A24PP0C7X0 464 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 TMEM225BP0DP42 221 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 SLC2A2P11168 524 aaPredicted RBP8.65□□□□□ -1.02
USP39-215ENST00000481409 GTF2F2P13984 249 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 MNDAP41218 407 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 HAAOP46952 286 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 PPOXP50336 477 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 GPM6AP51674 278 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 SNRPD2P62316 118 aaKnown RBP8.65□□□□□ -1.02
USP39-215ENST00000481409 RSU1Q15404 277 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 NHLRC3Q5JS37 347 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 GLIPR1L1Q6UWM5 242 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 Q6ZR03 302 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 LINC00596Q86U02 117 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 CCDC190Q86UF4 302 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 MUC15Q8N387 334 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 ZNF611Q8N823 705 aa8.65□□□□□ -1.02
USP39-215ENST00000481409 OR51D1Q8NGF3 324 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms