RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 OR52E4Q8NGH9 312 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 OR4C13Q8NGP0 309 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 PGLYRP3Q96LB9 341 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 ZNF597Q96LX8 424 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 MOB1AQ9H8S9 216 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 B3GAT2Q9NPZ5 323 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 ADARB2Q9NS39 739 aaKnown RBP6.49□□□□□ -1.37
LSM5-210ENST00000480956 RAB22AQ9UL26 194 aa6.49□□□□□ -1.37
LSM5-210ENST00000480956 PAIP2BQ9ULR5 123 aaKnown RBP6.49□□□□□ -1.37
LSM5-210ENST00000480956 NDRG2Q9UN36 371 aaKnown RBP6.49□□□□□ -1.37
LSM5-210ENST00000480956 KNDC1Q76NI1 1749 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 STRCP1A6NGW2 1772 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 TULP4Q9NRJ4 1543 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 CLDN24A6NM45 220 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 OR2B3O76000 313 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 CST2P09228 141 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 CRABP2P29373 138 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 PFN2P35080 140 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 NR4A2P43354 598 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 PPOXP50336 477 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 PDLIM4P50479 330 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 RND2P52198 227 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 FGF8P55075 233 aaPredicted RBP6.48□□□□□ -1.37
LSM5-210ENST00000480956 PLP2Q04941 152 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 PPP1R1AQ13522 171 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 OR2F1Q13607 317 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 CLEC12BQ2HXU8 276 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 KIAA1644Q3SXP7 199 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 PTF1AQ7RTS3 328 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 ZADH2Q8N4Q0 377 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 CLDN22Q8N7P3 220 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 ZNF300Q96RE9 604 aaPredicted RBP6.48□□□□□ -1.37
LSM5-210ENST00000480956 PARD6AQ9NPB6 346 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 NDUFAF1Q9Y375 327 aa6.48□□□□□ -1.37
LSM5-210ENST00000480956 NPHP4O75161 1426 aaPredicted RBP6.48□□□□□ -1.37
LSM5-210ENST00000480956 SAA2-SAA4A0A096LPE2 208 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 TRGV8A0A0C4DH27 118 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 IGHV3-38A0A0C4DH36 116 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 H7C1H1 209 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 K7ENP7 123 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 PHYHO14832 338 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 SEMG1P04279 462 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 HOXA5P20719 270 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 LRRC75BQ2VPJ9 315 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 FAM231DQ6ZW35 169 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 SLC36A1Q7Z2H8 476 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 PPP1R27Q86WC6 154 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 APLFQ8IW19 511 aaPredicted RBP6.47□□□□□ -1.37
LSM5-210ENST00000480956 LRRC25Q8N386 305 aaPredicted RBP6.47□□□□□ -1.37
LSM5-210ENST00000480956 GATD1Q8NB37 220 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 BEST4Q8NFU0 473 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 NT5CQ8TCD5 201 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 SDR42E1Q8WUS8 393 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 RMND5BQ96G75 393 aaPredicted RBP6.47□□□□□ -1.37
LSM5-210ENST00000480956 OR10C1Q96KK4 312 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 SELENOIQ9C0D9 397 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 ANXA10Q9UJ72 324 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.47□□□□□ -1.37
LSM5-210ENST00000480956 CHD2O14647 1828 aaKnown RBP6.47□□□□□ -1.37
LSM5-210ENST00000480956 NALCNQ8IZF0 1738 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 XRN1Q8IZH2 1706 aaKnown RBP6.47□□□□□ -1.37
LSM5-210ENST00000480956 GTF2F2P13984 249 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 HTR1EP28566 365 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 ADORA1P30542 326 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 MPIP34949 423 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 SPRP35270 261 aaPredicted RBP6.47□□□□□ -1.37
LSM5-210ENST00000480956 RIDAP52758 137 aaKnown RBP6.47□□□□□ -1.37
LSM5-210ENST00000480956 ZNF235Q14590 738 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 HES5Q5TA89 166 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 ZNF324BQ6AW86 544 aaPredicted RBP6.47□□□□□ -1.37
LSM5-210ENST00000480956 SPSB3Q6PJ21 355 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 MRGPRDQ8TDS7 321 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 SECTM1Q8WVN6 248 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 MAFIPQ8WZ33 124 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 SMIM12Q96EX1 92 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 SH2D2AQ9NP31 389 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 NYAP2Q9P242 653 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 VSIG4Q9Y279 399 aa6.47□□□□□ -1.37
LSM5-210ENST00000480956 RGPD8O14715 1765 aaPredicted RBP6.47□□□□□ -1.37
LSM5-210ENST00000480956 CPS1P31327 1500 aa6.46□□□□□ -1.37
LSM5-210ENST00000480956 A0A0B4J2A0 478 aa6.46□□□□□ -1.38
LSM5-210ENST00000480956 C16orf97H3BN30 126 aa6.46□□□□□ -1.38
LSM5-210ENST00000480956 IGLV2-14P01704 120 aa6.46□□□□□ -1.38
LSM5-210ENST00000480956 NBEAP1P0C6P0 100 aa6.46□□□□□ -1.38
LSM5-210ENST00000480956 SLC35G6P0C7Q6 338 aa6.46□□□□□ -1.38
LSM5-210ENST00000480956 CT45A10P0DMU9 189 aa6.46□□□□□ -1.38
LSM5-210ENST00000480956 RAP1BP61224 184 aa6.46□□□□□ -1.38
LSM5-210ENST00000480956 ZNF266Q14584 549 aa6.46□□□□□ -1.38
LSM5-210ENST00000480956 HIST3H3Q16695 136 aa6.46□□□□□ -1.38
LSM5-210ENST00000480956 LRRC26Q2I0M4 334 aa6.46□□□□□ -1.38
LSM5-210ENST00000480956 CCDC153Q494R4 210 aa6.46□□□□□ -1.38
LSM5-210ENST00000480956 PXDC1Q5TGL8 231 aa6.46□□□□□ -1.38
LSM5-210ENST00000480956 UFSP1Q6NVU6 142 aa6.46□□□□□ -1.38
LSM5-210ENST00000480956 WDR74Q6RFH5 385 aaPredicted RBP6.46□□□□□ -1.38
LSM5-210ENST00000480956 PEX26Q7Z412 305 aa6.46□□□□□ -1.38
LSM5-210ENST00000480956 TMEM144Q7Z5S9 345 aa6.46□□□□□ -1.38
LSM5-210ENST00000480956 TRPT1Q86TN4 253 aaKnown RBP6.46□□□□□ -1.38
LSM5-210ENST00000480956 RPF2Q9H7B2 306 aaKnown RBP6.46□□□□□ -1.38
LSM5-210ENST00000480956 SHPKQ9UHJ6 478 aa6.46□□□□□ -1.38
LSM5-210ENST00000480956 HHLA2Q9UM44 414 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms