RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 STAC2Q6ZMT1 411 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 NOXO1Q8NFA2 376 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 OR5D13Q8NGL4 314 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 PNPP00491 289 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 FAM157BP0CG42 384 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 CALHM3Q86XJ0 350 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 ADTRPQ96IZ2 230 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 TMEM208Q9BTX3 173 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 TOLLIPQ9H0E2 274 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 ESRP2Q9H6T0 727 aaKnown RBP8.6□□□□□ -1.03
VEGFA-212ENST00000480614 ADGRL4Q9HBW9 690 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 TRGV8A0A0C4DH27 118 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 EVX1P49640 407 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 BTG2P78543 158 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 FFAR4Q5NUL3 377 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 PAQR9Q6ZVX9 377 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 ZBTB44Q8NCP5 570 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 ST8SIA2Q92186 375 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 RNF2Q99496 336 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 FAM103A1Q9BTL3 118 aaKnown RBP8.6□□□□□ -1.03
VEGFA-212ENST00000480614 OCEL1Q9H607 264 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 ONECUT1Q9UBC0 465 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 BRCA1P38398 1863 aaKnown RBP8.6□□□□□ -1.03
VEGFA-212ENST00000480614 TRPM7Q96QT4 1865 aa8.6□□□□□ -1.03
VEGFA-212ENST00000480614 PTPRFP10586 1907 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 PIAS2O75928 621 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 ZNF766Q5HY98 468 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 FGF20Q9NP95 211 aaPredicted RBP8.59□□□□□ -1.03
VEGFA-212ENST00000480614 SDCBPO00560 298 aaPredicted RBP8.59□□□□□ -1.03
VEGFA-212ENST00000480614 HSBP1O75506 76 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 ARNTP27540 789 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 MAP6Q96JE9 813 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 PARP12Q9H0J9 701 aaKnown RBP8.59□□□□□ -1.03
VEGFA-212ENST00000480614 GLRX2Q9NS18 164 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 ZNF230Q9UIE0 474 aaPredicted RBP8.59□□□□□ -1.03
VEGFA-212ENST00000480614 ZGLP1P0C6A0 271 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 EPXP11678 715 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 HFEQ30201 348 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 DEFB109BQ30KR1 87 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 Q56UQ5 140 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 GFRALQ6UXV0 394 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 SSX8Q7RTT4 187 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 RPEQ96AT9 228 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 FGF17O60258 216 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 FDX2Q6P4F2 183 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 PRSS45Q7RTY3 260 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 SMIM14Q96QK8 99 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 CYSLTR2Q9NS75 346 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 SLCO1C1Q9NYB5 712 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 TRGV5A0A0B4J1U4 118 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 KRTDAPP60985 99 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 TEX37Q96LM6 180 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 GBF1Q92538 1859 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 HNF1AP20823 631 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 ANKRD33Q7Z3H0 272 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 FGF22Q9HCT0 170 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 VWA2Q5GFL6 755 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 RFLNAQ6ZTI6 216 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 CSPG4Q6UVK1 2322 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 ADAMTSL3P82987 1691 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 TNFSF15O95150 251 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 GPNMBQ14956 572 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 MICBQ29980 383 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 MRGPRX3Q96LB0 322 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 DOK1Q99704 481 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 RAB1BQ9H0U4 201 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 SH2D2AQ9NP31 389 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 TAAR3PQ9P1P4 343 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 B9D1Q9UPM9 204 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 MALRD1Q5VYJ5 2156 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 FPR2P25090 351 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 ATP6V1FQ16864 119 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 B3GNTL1Q67FW5 361 aaPredicted RBP8.59□□□□□ -1.03
VEGFA-212ENST00000480614 NKAIN4Q8IVV8 208 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 A4GNTQ9UNA3 340 aa8.59□□□□□ -1.03
VEGFA-212ENST00000480614 MED12LQ86YW9 2145 aa8.59□□□□□ -1.04
VEGFA-212ENST00000480614 RALGAPA2Q2PPJ7 1873 aa8.59□□□□□ -1.04
VEGFA-212ENST00000480614 NME1P15531 152 aaKnown RBP8.59□□□□□ -1.04
VEGFA-212ENST00000480614 SLC19A1P41440 591 aa8.59□□□□□ -1.04
VEGFA-212ENST00000480614 MS4A4AQ96JQ5 239 aa8.59□□□□□ -1.04
VEGFA-212ENST00000480614 UQCC1Q9NVA1 299 aa8.59□□□□□ -1.04
VEGFA-212ENST00000480614 GZMKP49863 264 aa8.58□□□□□ -1.04
VEGFA-212ENST00000480614 SCAND1P57086 179 aa8.58□□□□□ -1.04
VEGFA-212ENST00000480614 STUMQ69YW2 141 aa8.58□□□□□ -1.04
VEGFA-212ENST00000480614 CARFQ8N187 725 aa8.58□□□□□ -1.04
VEGFA-212ENST00000480614 TRAPPC1Q9Y5R8 145 aa8.58□□□□□ -1.04
VEGFA-212ENST00000480614 PCSK6P29122 969 aa8.58□□□□□ -1.04
VEGFA-212ENST00000480614 LINC00615Q96LM1 132 aaPredicted RBP8.58□□□□□ -1.04
VEGFA-212ENST00000480614 DUSP21Q9H596 190 aa8.58□□□□□ -1.04
VEGFA-212ENST00000480614 PSME4Q14997 1843 aa8.58□□□□□ -1.04
VEGFA-212ENST00000480614 CBY3A6NI87 242 aa8.58□□□□□ -1.04
VEGFA-212ENST00000480614 K7ESM1 405 aa8.58□□□□□ -1.04
VEGFA-212ENST00000480614 FABP5Q01469 135 aa8.58□□□□□ -1.04
VEGFA-212ENST00000480614 MARCH1Q8TCQ1 289 aa8.58□□□□□ -1.04
VEGFA-212ENST00000480614 C6orf106Q9H6K1 298 aaPredicted RBP8.58□□□□□ -1.04
VEGFA-212ENST00000480614 IGHV3-20A0A0C4DH32 117 aa8.58□□□□□ -1.04
VEGFA-212ENST00000480614 A0A1W2PNR3 127 aa8.58□□□□□ -1.04
VEGFA-212ENST00000480614 HRO43593 1189 aa8.58□□□□□ -1.04
VEGFA-212ENST00000480614 CRISP2P16562 243 aa8.58□□□□□ -1.04
VEGFA-212ENST00000480614 CLLU1Q5K131 121 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms