RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 DUX4L6P0CJ89 424 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 DUX4L7P0CJ90 424 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 PSKH1P11801 424 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 FAHP16930 419 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 PRKACGP22612 351 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 COX7A1P24310 79 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 TGFBR2P37173 567 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 HAAOP46952 286 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 TGM4P49221 684 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 MS4A2Q01362 244 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 KLRD1Q13241 179 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 DYNC1I2Q13409 638 aaKnown RBP5.83□□□□□ -1.48
COL17A1-205ENST00000480127 LY6EQ16553 131 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 ODF4Q2M2E3 257 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 BEAN1Q3B7T3 259 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 CEACAM21Q3KPI0 293 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 TEX36Q5VZQ5 186 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 TMEM236Q5W0B7 351 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 ZNF770Q6IQ21 691 aaPredicted RBP5.83□□□□□ -1.48
COL17A1-205ENST00000480127 DUX4L9Q6RFH8 374 aaPredicted RBP5.83□□□□□ -1.48
COL17A1-205ENST00000480127 CD300LDQ6UXZ3 194 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 Q6ZPA2 131 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 FAM220AQ7Z4H9 259 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 AQP12AQ8IXF9 295 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 YIPF7Q8N8F6 280 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 ZSCAN4Q8NAM6 433 aaPredicted RBP5.83□□□□□ -1.48
COL17A1-205ENST00000480127 BBS1Q8NFJ9 593 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 OR10Z1Q8NGY1 313 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 FAM110DQ8TAY7 271 aaPredicted RBP5.83□□□□□ -1.48
COL17A1-205ENST00000480127 DNAJC9Q8WXX5 260 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 OR5P3Q8WZ94 311 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 ITPKCQ96DU7 683 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 DUS3LQ96G46 650 aaKnown RBP5.83□□□□□ -1.48
COL17A1-205ENST00000480127 YIPF3Q9GZM5 350 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 PBOV1Q9GZY1 135 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 SIRPDQ9H106 197 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 DNTTIP1Q9H147 329 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 SEMA6AQ9H2E6 1030 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 HEXA-AS1Q9H8Q6 139 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 GPR84Q9NQS5 396 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 DNAJB9Q9UBS3 223 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 DUX4Q9UBX2 424 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 VPREB3Q9UKI3 123 aa5.83□□□□□ -1.48
COL17A1-205ENST00000480127 TRBV23-1A0A0A0MS06 115 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 FAM230AA0A1W2PPH8 454 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 G3V4G9 280 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 H3BSH0 61 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 H3BUX3 64 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 M0R1W7 72 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 FKBP6O75344 327 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 ZNF254O75437 659 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 CIB2O75838 187 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 PTBP3O95758 552 aaKnown RBP5.82□□□□□ -1.48
COL17A1-205ENST00000480127 CST4P01036 141 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 TFF1P04155 84 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 KRT8P05787 483 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 CSF1P09603 554 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 PIPP12273 146 aaPredicted RBP5.82□□□□□ -1.48
COL17A1-205ENST00000480127 SELLP14151 372 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 ATP6V1B1P15313 513 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 SAA4P35542 130 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 IER3P46695 156 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 RASSF2P50749 326 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 HCCSP53701 268 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 EDDM3BP56851 147 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 CXCR4P61073 352 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 RPL31P62899 125 aaKnown RBP5.82□□□□□ -1.48
COL17A1-205ENST00000480127 ELF3P78545 371 aaPredicted RBP5.82□□□□□ -1.48
COL17A1-205ENST00000480127 EGR3Q06889 387 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 PLA1AQ53H76 456 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 DMRTC1Q5HYR2 192 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 KPRPQ5T749 579 aaPredicted RBP5.82□□□□□ -1.48
COL17A1-205ENST00000480127 LINC01590Q5TEZ4 76 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 C1orf146Q5VVC0 180 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 STUMQ69YW2 141 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 ZNF322Q6U7Q0 402 aaPredicted RBP5.82□□□□□ -1.48
COL17A1-205ENST00000480127 TRPM8Q7Z2W7 1104 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 TRAPPC6BQ86SZ2 158 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 ZNF573Q86YE8 665 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 ZDHHC13Q8IUH4 622 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 ZNF679Q8IYX0 411 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 ADGRG5Q8IZF4 528 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 HS3ST5Q8IZT8 346 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 BATF2Q8N1L9 274 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 FGFRL1Q8N441 504 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 DTX3Q8N9I9 347 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 ZNRF1Q8ND25 227 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 OR4M1Q8NGD0 313 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 OR2T6Q8NHC8 308 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 TRMT10AQ8TBZ6 339 aaKnown RBP5.82□□□□□ -1.48
COL17A1-205ENST00000480127 BCAS4Q8TDM0 211 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 RAB3IPQ96QF0 476 aaPredicted RBP5.82□□□□□ -1.48
COL17A1-205ENST00000480127 AMELYQ99218 206 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 TBX5Q99593 518 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 DCTN5Q9BTE1 182 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 MOB1AQ9H8S9 216 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 ELL3Q9HB65 397 aaPredicted RBP5.82□□□□□ -1.48
COL17A1-205ENST00000480127 GPR173Q9NS66 373 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 IMPAD1Q9NX62 359 aa5.82□□□□□ -1.48
COL17A1-205ENST00000480127 GLS2Q9UI32 602 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms