RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	ACOXL	Q9NUZ1	547 aa		13.01	□□□□□ -0.33
HDLBP-238	ENST00000479894	PTTG3P	Q9NZH4	202 aa		13.01	□□□□□ -0.33
HDLBP-238	ENST00000479894	ZDHHC8	Q9ULC8	765 aa		13.01	□□□□□ -0.33
HDLBP-238	ENST00000479894		A0A1B0GVI7	797 aa		13	□□□□□ -0.33
HDLBP-238	ENST00000479894	C5orf63	A6NC05	138 aa		13	□□□□□ -0.33
HDLBP-238	ENST00000479894	ANKRD30BL	A7E2S9	258 aa		13	□□□□□ -0.33
HDLBP-238	ENST00000479894	TNFSF4	P23510	183 aa		13	□□□□□ -0.33
HDLBP-238	ENST00000479894	PAX8	Q06710	450 aa		13	□□□□□ -0.33
HDLBP-238	ENST00000479894	SPHAR	Q15513	63 aa		13	□□□□□ -0.33
HDLBP-238	ENST00000479894	VAX1	Q5SQQ9	334 aa		13	□□□□□ -0.33
HDLBP-238	ENST00000479894	ZBTB37	Q5TC79	503 aa		13	□□□□□ -0.33
HDLBP-238	ENST00000479894	NAA40	Q86UY6	237 aa		13	□□□□□ -0.33
HDLBP-238	ENST00000479894	SPERT	Q8NA61	448 aa		13	□□□□□ -0.33
HDLBP-238	ENST00000479894	OR13G1	Q8NGZ3	307 aa		13	□□□□□ -0.33
HDLBP-238	ENST00000479894	OR2G2	Q8NGZ5	317 aa		13	□□□□□ -0.33
HDLBP-238	ENST00000479894	SGK3	Q96BR1	496 aa		13	□□□□□ -0.33
HDLBP-238	ENST00000479894	C10orf35	Q96D05	121 aa		13	□□□□□ -0.33
HDLBP-238	ENST00000479894	ZNF649	Q9BS31	505 aa		13	□□□□□ -0.33
HDLBP-238	ENST00000479894	ERVK-18	Q9QC07	812 aa		13	□□□□□ -0.33
HDLBP-238	ENST00000479894	RNF114	Q9Y508	228 aa		13	□□□□□ -0.33
HDLBP-238	ENST00000479894	TRBV2	A0A0J9YWF9	115 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	IQCF6	A8MYZ5	107 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	PRR32	B1ATL7	298 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	SRSF10	O75494	262 aa	Known RBP	12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	ISG15	P05161	165 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	CD1A	P06126	327 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	IGHV4-38-2	P0DP08	117 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	ACSM1	Q08AH1	577 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	RIPPLY1	Q0D2K3	151 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	PSG7	Q13046	419 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	GPR50	Q13585	617 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	ALKBH1	Q13686	389 aa	Known RBP	12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	C2orf68	Q2NKX9	166 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	SNAI3	Q3KNW1	292 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	GLYATL3	Q5SZD4	288 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	SPATA46	Q5T0L3	261 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	FIP1L1	Q6UN15	594 aa	Known RBP	12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	SPIC	Q8N5J4	248 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	TMEM86B	Q8N661	226 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	ZNF676	Q8N7Q3	588 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	OR8B12	Q8NGG6	310 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	OR5AK2	Q8NH90	309 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	GATAD2B	Q8WXI9	593 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	UPRT	Q96BW1	309 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	PATZ1	Q9HBE1	687 aa	Known RBP	12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	NEK6	Q9HC98	313 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	ISYNA1	Q9NPH2	558 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	TMEM100	Q9NV29	134 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	MRPL15	Q9P015	296 aa	Known RBP	12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	TENM3	Q9P273	2699 aa		12.99	□□□□□ -0.33
HDLBP-238	ENST00000479894	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	CD300LB	A8K4G0	201 aa		12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	MAGEB4	O15481	346 aa	Predicted RBP	12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	SYT7	O43581	403 aa		12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	SERPINA3	P01011	423 aa		12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	TTR	P02766	147 aa		12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	GNAL	P38405	381 aa		12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	ZNF81	P51508	661 aa		12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	ZNF92	Q03936	586 aa		12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	IRF3	Q14653	427 aa		12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	MED22	Q15528	200 aa		12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	TBCE	Q15813	527 aa	Predicted RBP	12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	TST	Q16762	297 aa	Known RBP	12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	GFOD2	Q3B7J2	385 aa		12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	ZNF773	Q6PK81	442 aa		12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	OR8G5	Q8NG78	346 aa		12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	FAM110D	Q8TAY7	271 aa	Predicted RBP	12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	OR51E1	Q8TCB6	317 aa		12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	GTF3A	Q92664	365 aa	Known RBP	12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	EGLN1	Q9GZT9	426 aa		12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	ISG20L2	Q9H9L3	353 aa	Known RBP	12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	TCF7L1	Q9HCS4	588 aa		12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	NOX4	Q9NPH5	578 aa		12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	CLEC2D	Q9UHP7	191 aa		12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	HHLA2	Q9UM44	414 aa		12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	SLC22A13	Q9Y226	551 aa		12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894	NPTN	Q9Y639	398 aa		12.98	□□□□□ -0.33
HDLBP-238	ENST00000479894		A0A087WXM4	84 aa		12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894		G3V4G9	280 aa		12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894	OGG1	O15527	345 aa		12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894	GMDS	O60547	372 aa		12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894	DHRS3	O75911	302 aa		12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894	IGHV2-70	P01814	119 aa		12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894	ADH4	P08319	380 aa		12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894	PSMB10	P40306	273 aa		12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894	GSK3A	P49840	483 aa		12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894	PROK1	P58294	105 aa		12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894	ERVS71-1	P61550	626 aa		12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894	FAM3A	P98173	230 aa		12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894	MFGE8	Q08431	387 aa	Predicted RBP	12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894	OR8B8	Q15620	311 aa		12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894	TMEM155	Q4W5P6	130 aa		12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894	WDR38	Q5JTN6	314 aa		12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894	SAMD5	Q5TGI4	173 aa		12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894	OR2G6	Q5TZ20	316 aa		12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894	ZNF367	Q7RTV3	350 aa		12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894	MS4A15	Q8N5U1	240 aa		12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894	OR2AE1	Q8NHA4	323 aa		12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894	ZDHHC16	Q969W1	377 aa		12.97	□□□□□ -0.33
HDLBP-238	ENST00000479894	TECTB	Q96PL2	329 aa		12.97	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms