RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 NRASP01111 189 aa11.3□□□□□ -0.6
SEC13-216ENST00000479868 PPP3CBP16298 524 aa11.3□□□□□ -0.6
SEC13-216ENST00000479868 PPIAP62937 165 aaKnown RBP11.3□□□□□ -0.6
SEC13-216ENST00000479868 IL13RA1P78552 427 aa11.3□□□□□ -0.6
SEC13-216ENST00000479868 GK2Q14410 553 aaPredicted RBP11.3□□□□□ -0.6
SEC13-216ENST00000479868 NRN1LQ496H8 165 aa11.3□□□□□ -0.6
SEC13-216ENST00000479868 Q96M66 194 aa11.3□□□□□ -0.6
SEC13-216ENST00000479868 PARPBPQ9NWS1 579 aa11.3□□□□□ -0.6
SEC13-216ENST00000479868 ZNF581Q9P0T4 197 aa11.3□□□□□ -0.6
SEC13-216ENST00000479868 UBQLN2Q9UHD9 624 aa11.3□□□□□ -0.6
SEC13-216ENST00000479868 TRAV14DV4A0A0A6YYC5 116 aa11.29□□□□□ -0.6
SEC13-216ENST00000479868 RPS10-NUDT3A0A1W2PQS6 291 aa11.29□□□□□ -0.6
SEC13-216ENST00000479868 ZNF503-AS2A6NEH8 195 aa11.29□□□□□ -0.6
SEC13-216ENST00000479868 KLRC4-KLRK1H3BQV0 150 aa11.29□□□□□ -0.6
SEC13-216ENST00000479868 GALR2O43603 387 aaPredicted RBP11.29□□□□□ -0.6
SEC13-216ENST00000479868 AMY2BP19961 511 aa11.29□□□□□ -0.6
SEC13-216ENST00000479868 VAMP1P23763 118 aa11.29□□□□□ -0.6
SEC13-216ENST00000479868 CBX5P45973 191 aa11.29□□□□□ -0.6
SEC13-216ENST00000479868 NPY4RP50391 375 aa11.29□□□□□ -0.6
SEC13-216ENST00000479868 CNN3Q15417 329 aaKnown RBP11.29□□□□□ -0.6
SEC13-216ENST00000479868 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.29□□□□□ -0.6
SEC13-216ENST00000479868 PIP4P1Q86T03 277 aa11.29□□□□□ -0.6
SEC13-216ENST00000479868 MITD1Q8WV92 249 aa11.29□□□□□ -0.6
SEC13-216ENST00000479868 C1QTNF5Q9BXJ0 243 aa11.29□□□□□ -0.6
SEC13-216ENST00000479868 PRRG4Q9BZD6 226 aa11.29□□□□□ -0.6
SEC13-216ENST00000479868 BCO1Q9HAY6 547 aa11.29□□□□□ -0.6
SEC13-216ENST00000479868 PARD6AQ9NPB6 346 aa11.29□□□□□ -0.6
SEC13-216ENST00000479868 KCNN3Q9UGI6 736 aa11.29□□□□□ -0.6
SEC13-216ENST00000479868 ZNF391Q9UJN7 358 aa11.29□□□□□ -0.6
SEC13-216ENST00000479868 SERPINE3A8MV23 424 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 LEUTXA8MZ59 168 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 RPL36A-HNRNPH2H7BZ11 118 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 HTR3BO95264 441 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 HLA-HP01893 362 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 PRKACBP22694 351 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 S100A11P31949 105 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 RBP2P50120 134 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 SNU13P55769 128 aaKnown RBP11.28□□□□□ -0.6
SEC13-216ENST00000479868 IKZF1Q13422 519 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 OR8B8Q15620 311 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 ACTBL2Q562R1 376 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 SIGIRRQ6IA17 410 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 FAHD2BQ6P2I3 314 aaPredicted RBP11.28□□□□□ -0.6
SEC13-216ENST00000479868 TMUB2Q71RG4 321 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 ARRDC1Q8N5I2 433 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 ZFP62Q8NB50 900 aaPredicted RBP11.28□□□□□ -0.6
SEC13-216ENST00000479868 NAXEQ8NCW5 288 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 OR5H2Q8NGV7 314 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 CASTOR1Q8WTX7 329 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 ASB13Q8WXK3 278 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 BORCS8Q96FH0 119 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 FAHD2AQ96GK7 314 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 METTL9Q9H1A3 318 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 RGCCQ9H4X1 137 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 MAB21L2Q9Y586 359 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 ARHGAP21Q5T5U3 1957 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 FRYQ5TBA9 3013 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 OR6C65A6NJZ3 312 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 RFPL4AA6NLU0 287 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 RFPL4AL1F8VTS6 287 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 SDCBPO00560 298 aaPredicted RBP11.28□□□□□ -0.6
SEC13-216ENST00000479868 CCL2P13500 99 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 C4BPBP20851 252 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 ARPC4P59998 168 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 HLXQ14774 488 aaPredicted RBP11.28□□□□□ -0.6
SEC13-216ENST00000479868 RSU1Q15404 277 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 RNFT1Q5M7Z0 435 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 NKAPLQ5M9Q1 402 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 ZNF100Q8IYN0 542 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 DEFB124Q8NES8 71 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 CSNK2A3Q8NEV1 391 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 SEC22AQ96IW7 307 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 HDHD3Q9BSH5 251 aaPredicted RBP11.28□□□□□ -0.6
SEC13-216ENST00000479868 PRDM14Q9GZV8 571 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 DEFB127Q9H1M4 99 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 C5orf66Q9H5L9 145 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 ZNF318Q5VUA4 2279 aa11.28□□□□□ -0.6
SEC13-216ENST00000479868 IGKV1-12A0A0C4DH73 117 aa11.27□□□□□ -0.6
SEC13-216ENST00000479868 LINC00862A6NCI5 91 aa11.27□□□□□ -0.6
SEC13-216ENST00000479868 FIGNL2A6NMB9 653 aa11.27□□□□□ -0.6
SEC13-216ENST00000479868 ZNF724A8MTY0 619 aa11.27□□□□□ -0.6
SEC13-216ENST00000479868 MSTNO14793 375 aa11.27□□□□□ -0.6
SEC13-216ENST00000479868 IGKV1D-12P01611 117 aa11.27□□□□□ -0.6
SEC13-216ENST00000479868 CD8AP01732 235 aa11.27□□□□□ -0.6
SEC13-216ENST00000479868 CSTBP04080 98 aaKnown RBP11.27□□□□□ -0.6
SEC13-216ENST00000479868 OR3A3P47888 321 aa11.27□□□□□ -0.6
SEC13-216ENST00000479868 GMFBP60983 142 aa11.27□□□□□ -0.6
SEC13-216ENST00000479868 BAMBIQ13145 260 aa11.27□□□□□ -0.6
SEC13-216ENST00000479868 TAF9Q16594 264 aa11.27□□□□□ -0.6
SEC13-216ENST00000479868 COLCA1Q6ZS62 124 aa11.27□□□□□ -0.6
SEC13-216ENST00000479868 LHFPL2Q6ZUX7 228 aa11.27□□□□□ -0.6
SEC13-216ENST00000479868 NUFIP2Q7Z417 695 aaKnown RBP11.27□□□□□ -0.6
SEC13-216ENST00000479868 OR13G1Q8NGZ3 307 aa11.27□□□□□ -0.6
SEC13-216ENST00000479868 APH1AQ96BI3 265 aa11.27□□□□□ -0.6
SEC13-216ENST00000479868 PHB2Q99623 299 aa11.27□□□□□ -0.6
SEC13-216ENST00000479868 ARL6Q9H0F7 186 aa11.27□□□□□ -0.6
SEC13-216ENST00000479868 ZNF701Q9NV72 531 aaPredicted RBP11.27□□□□□ -0.6
SEC13-216ENST00000479868 PLEKHJ1Q9NW61 149 aa11.27□□□□□ -0.6
SEC13-216ENST00000479868 GPR132Q9UNW8 380 aa11.27□□□□□ -0.6
SEC13-216ENST00000479868 CFAP47Q6ZTR5 3102 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms