RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 TCEAL3Q969E4 200 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 HRH4Q9H3N8 390 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 SAV1Q9H4B6 383 aaPredicted RBP9.44□□□□□ -0.9
VPS52-217ENST00000478934 CRLF2Q9HC73 371 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 CYTL1Q9NRR1 136 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 FLVCR1Q9Y5Y0 555 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 SHANK1Q9Y566 2161 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 IGKV1-27A0A075B6S5 117 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 FOXI3A8MTJ6 420 aaPredicted RBP9.44□□□□□ -0.9
VPS52-217ENST00000478934 DHRS3O75911 302 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 IGLV3-1P01715 115 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 HLA-GP17693 338 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 DSCR4P56555 118 aaPredicted RBP9.44□□□□□ -0.9
VPS52-217ENST00000478934 ECH1Q13011 328 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 IL11RAQ14626 422 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 ZNF239Q16600 458 aaKnown RBP9.44□□□□□ -0.9
VPS52-217ENST00000478934 AKIRIN2Q53H80 203 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 SLC23A3Q6PIS1 610 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 NAT6Q93015 286 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 OCSTAMPQ9BR26 566 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 SMIM3Q9BZL3 60 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 WDR54Q9H977 334 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 FOXD3Q9UJU5 478 aaPredicted RBP9.44□□□□□ -0.9
VPS52-217ENST00000478934 NCKAP5O14513 1909 aa9.44□□□□□ -0.9
VPS52-217ENST00000478934 DOCK7Q96N67 2140 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 LOC102725191A0A1B0GVB3 256 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 TRAPPC6AO75865 159 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 TMEM225BP0DP42 221 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 NAT2P11245 290 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 PRF1P14222 555 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 NAT1P18440 290 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 SPINK2P20155 84 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 OPRM1P35372 400 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 LSM6P62312 80 aaKnown RBP9.43□□□□□ -0.9
VPS52-217ENST00000478934 TAF9Q16594 264 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 C10orf128Q5T292 105 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 PDSS1Q5T2R2 415 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 C5orf24Q7Z6I8 188 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 LDLRAD3Q86YD5 345 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 FAM89BQ8N5H3 189 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 TMEM105Q8N8V8 129 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 ASB13Q8WXK3 278 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 URM1Q9BTM9 101 aaKnown RBP9.43□□□□□ -0.9
VPS52-217ENST00000478934 FAAP24Q9BTP7 215 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 TLNRD1Q9H1K6 362 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 LIME1Q9H400 295 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 SH2D2AQ9NP31 389 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 TREM1Q9NP99 234 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 FREM1Q5H8C1 2179 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 TMEM218A2RU14 115 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 PINLYPA6NC86 204 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 ZNF705EA8MWA4 302 aaPredicted RBP9.43□□□□□ -0.9
VPS52-217ENST00000478934 F8W036 122 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 CXCL13O43927 109 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 ATG12O94817 140 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 FARS2O95363 451 aaKnown RBP9.43□□□□□ -0.9
VPS52-217ENST00000478934 GSK3AP49840 483 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 MTCP1P56278 107 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 CLDN15P56746 228 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 MLF1P58340 268 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 B3GALT5-AS1P59052 145 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 BLOC1S1P78537 153 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 TRIM61Q5EBN2 209 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 WIPI1Q5MNZ9 446 aaPredicted RBP9.43□□□□□ -0.9
VPS52-217ENST00000478934 VAX1Q5SQQ9 334 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 OR2A2Q6IF42 318 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 BAP18Q8IXM2 172 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 OR4A4PQ8NGN8 299 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 OR2Y1Q8NGV0 311 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 OR14L1PQ8NHC6 308 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 ZNF845Q96IR2 970 aaPredicted RBP9.43□□□□□ -0.9
VPS52-217ENST00000478934 DEPPQ9NTK1 212 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 ANAPC10Q9UM13 185 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 OSGIN2Q9Y236 505 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 V9GYS6 101 aa9.43□□□□□ -0.9
VPS52-217ENST00000478934 NBEAQ8NFP9 2946 aa9.42□□□□□ -0.9
VPS52-217ENST00000478934 C9J4A7 227 aa9.42□□□□□ -0.9
VPS52-217ENST00000478934 FBXO24O75426 580 aa9.42□□□□□ -0.9
VPS52-217ENST00000478934 SFT2D2O95562 160 aa9.42□□□□□ -0.9
VPS52-217ENST00000478934 NFYBP25208 207 aa9.42□□□□□ -0.9
VPS52-217ENST00000478934 CTSSP25774 331 aa9.42□□□□□ -0.9
VPS52-217ENST00000478934 ZFP36L1Q07352 338 aaKnown RBP9.42□□□□□ -0.9
VPS52-217ENST00000478934 CLRN3Q8NCR9 226 aa9.42□□□□□ -0.9
VPS52-217ENST00000478934 CHST5Q9GZS9 411 aa9.42□□□□□ -0.9
VPS52-217ENST00000478934 SLC6A15Q9H2J7 730 aa9.42□□□□□ -0.9
VPS52-217ENST00000478934 GLS2Q9UI32 602 aa9.42□□□□□ -0.9
VPS52-217ENST00000478934 TEX13DA0A0J9YY54 714 aaPredicted RBP9.42□□□□□ -0.9
VPS52-217ENST00000478934 NTN3O00634 580 aaPredicted RBP9.42□□□□□ -0.9
VPS52-217ENST00000478934 SCGB1D2O95969 90 aa9.42□□□□□ -0.9
VPS52-217ENST00000478934 SERPINA5P05154 406 aa9.42□□□□□ -0.9
VPS52-217ENST00000478934 TPT1P13693 172 aaKnown RBP9.42□□□□□ -0.9
VPS52-217ENST00000478934 RPS2P15880 293 aaKnown RBP9.42□□□□□ -0.9
VPS52-217ENST00000478934 NME2P22392 152 aa9.42□□□□□ -0.9
VPS52-217ENST00000478934 SP6Q3SY56 376 aa9.42□□□□□ -0.9
VPS52-217ENST00000478934 C9orf135Q5VTT2 229 aa9.42□□□□□ -0.9
VPS52-217ENST00000478934 RPL7L1Q6DKI1 246 aaKnown RBP9.42□□□□□ -0.9
VPS52-217ENST00000478934 LHFPL1Q86WI0 220 aa9.42□□□□□ -0.9
VPS52-217ENST00000478934 MAML2Q8IZL2 1156 aaPredicted RBP9.42□□□□□ -0.9
VPS52-217ENST00000478934 HAS2Q92819 552 aa9.42□□□□□ -0.9
VPS52-217ENST00000478934 S100A13Q99584 98 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms