RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 DAOAP59103 153 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 TNFAIP8L3Q5GJ75 292 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 NCR3LG1Q68D85 454 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 OR52E8Q6IFG1 317 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 ZFP1Q6P2D0 407 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 ZNF620Q6ZNG0 422 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 Q6ZVH6 145 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 SETD3Q86TU7 594 aaPredicted RBP3.3□□□□□ -1.88
CCDC171-207ENST00000478913 VRK2Q86Y07 508 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 PDIK1LQ8N165 341 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 DHRSXQ8N5I4 330 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 CLDN19Q8N6F1 224 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 TRIML2Q8N7C3 387 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 ZNF645Q8N7E2 425 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 PRELID2Q8N945 189 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 LINC01555Q8NAE3 123 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 OR10A7Q8NGE5 316 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 BRSK1Q8TDC3 778 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 RNF138Q8WVD3 245 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 C17orf50Q8WW18 174 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 DNAJA4Q8WW22 397 aaPredicted RBP3.3□□□□□ -1.88
CCDC171-207ENST00000478913 TCTEX1D2Q8WW35 142 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 RPL3LQ92901 407 aaKnown RBP3.3□□□□□ -1.88
CCDC171-207ENST00000478913 TIMD4Q96H15 378 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 TMEM101Q96IK0 257 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 TSNARE1Q96NA8 513 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 ZFP3Q96NJ6 502 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 DHRS9Q9BPW9 319 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 TPPP3Q9BW30 176 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 CHRNA10Q9GZZ6 450 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 MAGT1Q9H0U3 335 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 OR2AG1Q9H205 316 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 LIN28AQ9H9Z2 209 aaKnown RBP3.3□□□□□ -1.88
CCDC171-207ENST00000478913 MEAF6Q9HAF1 191 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 PARVGQ9HBI0 331 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 PLGRKTQ9HBL7 147 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 MYOZ1Q9NP98 299 aaPredicted RBP3.3□□□□□ -1.88
CCDC171-207ENST00000478913 BTNL2Q9UIR0 455 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 LAMP5Q9UJQ1 280 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 RAB26Q9ULW5 256 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 CDH10Q9Y6N8 788 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
CCDC171-207ENST00000478913 A0A0U1RQV1 116 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 HELTA6NFD8 242 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 GOLGA8MH3BSY2 632 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 BOLA2-SMG1P6H3BVE0 249 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 PANO1I0J062 215 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 DNALI1O14645 258 aaPredicted RBP3.29□□□□□ -1.88
CCDC171-207ENST00000478913 ZNF189O75820 626 aaPredicted RBP3.29□□□□□ -1.88
CCDC171-207ENST00000478913 LRATO95237 230 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 SNAPINO95295 136 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 TNNI1P19237 187 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 S100A1P23297 94 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 CD1BP29016 333 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 CRABP2P29373 138 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 GTF2H1P32780 548 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 TMED10P49755 219 aaKnown RBP3.29□□□□□ -1.88
CCDC171-207ENST00000478913 SERPINB9P50453 376 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 PPIDQ08752 370 aaKnown RBP3.29□□□□□ -1.88
CCDC171-207ENST00000478913 PDK3Q15120 406 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 NDUFA5Q16718 116 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 HADHQ16836 314 aaKnown RBP3.29□□□□□ -1.88
CCDC171-207ENST00000478913 TATDN3Q17R31 274 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 KLF17Q5JT82 389 aaPredicted RBP3.29□□□□□ -1.88
CCDC171-207ENST00000478913 SYPL2Q5VXT5 272 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 FAM71F2Q6NXP2 309 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 C4orf22Q6V702 233 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 DHDDSQ86SQ9 333 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 UNC93AQ86WB7 457 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 NUDCD3Q8IVD9 361 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 CTAGE3PQ8IX95 158 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 DTX3LQ8TDB6 740 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 C10orf82Q8WW14 230 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 C1orf54Q8WWF1 131 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 DNAJC19Q96DA6 116 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 NRBF2Q96F24 287 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 ZNF799Q96GE5 643 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 BIRC8Q96P09 236 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 ARHGDIGQ99819 225 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 KLHDC3Q9BQ90 382 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 THTPAQ9BU02 230 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 RIOK2Q9BVS4 552 aaKnown RBP3.29□□□□□ -1.88
CCDC171-207ENST00000478913 SRMSQ9H3Y6 488 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 SLC35D1Q9NTN3 355 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 NUDT15Q9NV35 164 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 PARVAQ9NVD7 372 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 GID8Q9NWU2 228 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 RHBDL2Q9NX52 303 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 BLOC1S6Q9UL45 172 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 TMED5Q9Y3A6 229 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 OR10H1Q9Y4A9 318 aa3.29□□□□□ -1.88
CCDC171-207ENST00000478913 C2orf74A8MZ97 194 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 RTL8CO15255 209 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 CALB1P05937 261 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 SNRPAP09012 282 aaKnown RBP3.28□□□□□ -1.88
CCDC171-207ENST00000478913 HMOX2P30519 316 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 FOXN2P32314 431 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 RPA3P35244 121 aaPredicted RBP3.28□□□□□ -1.88
CCDC171-207ENST00000478913 LEPP41159 167 aa3.28□□□□□ -1.88
CCDC171-207ENST00000478913 APOC4P55056 127 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms