RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 TATDN3Q17R31 274 aa10.36□□□□□ -0.75
PRPF39-203ENST00000477626 TRIQKQ629K1 86 aa10.36□□□□□ -0.75
PRPF39-203ENST00000477626 RAB12Q6IQ22 244 aa10.36□□□□□ -0.75
PRPF39-203ENST00000477626 LHFPL1Q86WI0 220 aa10.36□□□□□ -0.75
PRPF39-203ENST00000477626 JAGN1Q8N5M9 183 aa10.36□□□□□ -0.75
PRPF39-203ENST00000477626 OR56B2PQ8NGI1 322 aa10.36□□□□□ -0.75
PRPF39-203ENST00000477626 NUBP2Q9Y5Y2 271 aa10.36□□□□□ -0.75
PRPF39-203ENST00000477626 CFAP46Q8IYW2 2715 aa10.36□□□□□ -0.75
PRPF39-203ENST00000477626 NAP1L6A6NFF2 107 aa10.36□□□□□ -0.75
PRPF39-203ENST00000477626 CECR9P0C854 216 aa10.36□□□□□ -0.75
PRPF39-203ENST00000477626 CHATP28329 748 aa10.36□□□□□ -0.75
PRPF39-203ENST00000477626 AWAT2Q6E213 333 aa10.36□□□□□ -0.75
PRPF39-203ENST00000477626 Q6ZR03 302 aa10.36□□□□□ -0.75
PRPF39-203ENST00000477626 KCNG3Q8TAE7 436 aa10.36□□□□□ -0.75
PRPF39-203ENST00000477626 ATG5Q9H1Y0 275 aa10.36□□□□□ -0.75
PRPF39-203ENST00000477626 HMX3A6NHT5 357 aa10.36□□□□□ -0.75
PRPF39-203ENST00000477626 CHRM2P08172 466 aa10.36□□□□□ -0.75
PRPF39-203ENST00000477626 FAM87AP0C7U9 286 aa10.36□□□□□ -0.75
PRPF39-203ENST00000477626 Q6ZS49 121 aa10.36□□□□□ -0.75
PRPF39-203ENST00000477626 MTCH1Q9NZJ7 389 aa10.36□□□□□ -0.75
PRPF39-203ENST00000477626 TRAV18A0A075B6X5 111 aa10.35□□□□□ -0.75
PRPF39-203ENST00000477626 IGHV2OR16-5A0A0B4J2B6 119 aa10.35□□□□□ -0.75
PRPF39-203ENST00000477626 GSTP1P09211 210 aaKnown RBP10.35□□□□□ -0.75
PRPF39-203ENST00000477626 PNLIPRP3Q17RR3 467 aa10.35□□□□□ -0.75
PRPF39-203ENST00000477626 ALKBH6Q3KRA9 238 aa10.35□□□□□ -0.75
PRPF39-203ENST00000477626 TOMM5Q8N4H5 51 aa10.35□□□□□ -0.75
PRPF39-203ENST00000477626 PECRQ9BY49 303 aa10.35□□□□□ -0.75
PRPF39-203ENST00000477626 C20orf85Q9H1P6 137 aa10.35□□□□□ -0.75
PRPF39-203ENST00000477626 CHD8Q9HCK8 2581 aa10.35□□□□□ -0.75
PRPF39-203ENST00000477626 THBDP07204 575 aa10.35□□□□□ -0.75
PRPF39-203ENST00000477626 VSIG10L2P0DP72 767 aa10.35□□□□□ -0.75
PRPF39-203ENST00000477626 GNB3P16520 340 aa10.35□□□□□ -0.75
PRPF39-203ENST00000477626 PRKACBP22694 351 aa10.35□□□□□ -0.75
PRPF39-203ENST00000477626 GIFP27352 417 aa10.35□□□□□ -0.75
PRPF39-203ENST00000477626 GNALP38405 381 aa10.35□□□□□ -0.75
PRPF39-203ENST00000477626 MPV17P39210 176 aa10.35□□□□□ -0.75
PRPF39-203ENST00000477626 FAAP20Q6NZ36 180 aa10.35□□□□□ -0.75
PRPF39-203ENST00000477626 MOV10Q9HCE1 1003 aaKnown RBP10.35□□□□□ -0.75
PRPF39-203ENST00000477626 PTTG3PQ9NZH4 202 aa10.35□□□□□ -0.75
PRPF39-203ENST00000477626 COPZ2Q9P299 210 aa10.35□□□□□ -0.75
PRPF39-203ENST00000477626 PRR14LQ5THK1 2151 aa10.35□□□□□ -0.75
PRPF39-203ENST00000477626 TMEM235A6NFC5 223 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 CD300LBA8K4G0 201 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 MLNRO43193 412 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 SCGNO76038 276 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 MGMTP16455 207 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 PRDX4Q13162 271 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 ZNF585AQ6P3V2 769 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 FJX1Q86VR8 437 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 DRAXINQ8NBI3 349 aaPredicted RBP10.34□□□□□ -0.75
PRPF39-203ENST00000477626 ACBD4Q8NC06 268 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 OR11H7Q8NGC8 314 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 FBXW5Q969U6 566 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 IGKV1D-8A0A087WSZ0 117 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 CSF1P09603 554 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 TUBG1P23258 451 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 UCP2P55851 309 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 PSG7Q13046 419 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 SRSF7Q16629 238 aaKnown RBP eCLIP10.34□□□□□ -0.75
PRPF39-203ENST00000477626 TIMM23BQ5SRD1 257 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 ZNF880Q6PDB4 577 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 CHMP1BQ7LBR1 199 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 BHLHA15Q7RTS1 189 aaPredicted RBP10.34□□□□□ -0.75
PRPF39-203ENST00000477626 PEG10Q86TG7 708 aaKnown RBP10.34□□□□□ -0.75
PRPF39-203ENST00000477626 MCEMP1Q8IX19 187 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 MED30Q96HR3 178 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 ARHGAP5-AS1Q96IT6 56 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 TUBG2Q9NRH3 451 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 MYEF2Q9P2K5 600 aaKnown RBP10.34□□□□□ -0.75
PRPF39-203ENST00000477626 PIEZO2Q9H5I5 2752 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 FAM90A10PA6NDY2 464 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 FAM90A18PA6NE21 464 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 FAM90A16PA6NEW6 464 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 FAM90A20PA6NIJ5 464 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 FAM90A8PA6NJQ4 464 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 FAM90A7PA6NKC0 464 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 FAM90A22PA8MWA6 464 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 FAM90A12PA8MX19 464 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 FAM90A5PA8MXJ8 464 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 FAM90A23PA8MXZ1 464 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 CD3DP04234 171 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 FAM90A15PP0C7V4 464 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 FAM90A13PP0C7W8 464 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 FAM90A14PP0C7W9 464 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 FAM90A24PP0C7X0 464 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 CD79AP11912 226 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 NPBWR2P48146 333 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 CNN3Q15417 329 aaKnown RBP10.34□□□□□ -0.75
PRPF39-203ENST00000477626 ST3GAL2Q16842 350 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 VAX1Q5SQQ9 334 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 BEND4Q6ZU67 534 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 TCTE3Q8IZS6 198 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 C19orf18Q8NEA5 215 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 OR5A2Q8NGI9 324 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 LIME1Q9H400 295 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 LUZP4Q9P127 313 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 KCNN3Q9UGI6 736 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 PLEKHA6Q9Y2H5 1048 aa10.34□□□□□ -0.75
PRPF39-203ENST00000477626 ZNF850A8MQ14 1090 aa10.33□□□□□ -0.76
PRPF39-203ENST00000477626 ZNF250P15622 560 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms