RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 POU2F3Q9UKI9 436 aa4.41□□□□□ -1.7
VPS45-207ENST00000477558 KLHDC2Q9Y2U9 406 aa4.41□□□□□ -1.7
VPS45-207ENST00000477558 FAM90A10PA6NDY2 464 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 TVP23AA6NH52 213 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 ZNF878C9JN71 531 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 TSPAN4O14817 238 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 SPRY3O43610 288 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 SELENOFO60613 162 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 NDUFS7O75251 213 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 SRSF10O75494 262 aaKnown RBP4.4□□□□□ -1.7
VPS45-207ENST00000477558 IGLV3-1P01715 115 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 CD55P08174 381 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 ANPEPP15144 967 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 KITLGP21583 273 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 POU1F1P28069 291 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 HTR1FP30939 366 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 CDKN1AP38936 164 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 MPV17P39210 176 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 RPS27P42677 84 aaKnown RBP4.4□□□□□ -1.7
VPS45-207ENST00000477558 RGS6P49758 472 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 RAD23AP54725 363 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 KLF3P57682 345 aaPredicted RBP4.4□□□□□ -1.7
VPS45-207ENST00000477558 ISL1P61371 349 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 PPP1CBP62140 327 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 ELF3P78545 371 aaPredicted RBP4.4□□□□□ -1.7
VPS45-207ENST00000477558 MRPS11P82912 194 aaKnown RBP4.4□□□□□ -1.7
VPS45-207ENST00000477558 GALK2Q01415 458 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 TMED1Q13445 227 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 RCN1Q15293 331 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 SNAPC1Q16533 368 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 ZNF684Q5T5D7 378 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 OGFRL1Q5TC84 451 aaPredicted RBP4.4□□□□□ -1.7
VPS45-207ENST00000477558 SERTAD4-AS1Q5TG53 156 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 DRAM2Q6UX65 266 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 UNQ6126/PRO20091Q6UXV3 157 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 DCXRQ7Z4W1 244 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 GLCCI1Q86VQ1 547 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 LRP11Q86VZ4 500 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 LINC00346Q8IVM7 164 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 GID4Q8IVV7 300 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 RFLNBQ8N5W9 214 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 PRR26Q8N8Z3 221 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 OR6K6Q8NGW6 343 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 SLC25A40Q8TBP6 338 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 KLF14Q8TD94 323 aaPredicted RBP4.4□□□□□ -1.7
VPS45-207ENST00000477558 TRUB1Q8WWH5 349 aaKnown RBP4.4□□□□□ -1.7
VPS45-207ENST00000477558 SLC7A6Q92536 515 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 SLAMF6Q96DU3 332 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 INTS14Q96SY0 518 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 TEAD3Q99594 435 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 KCNS3Q9BQ31 491 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 ABHD6Q9BV23 337 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 YIPF3Q9GZM5 350 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 RERGLQ9H628 205 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 ADGRL4Q9HBW9 690 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 PCDHB16Q9NRJ7 776 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 TVP23BQ9NYZ1 205 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 CMAHPQ9Y471 501 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 MALRD1Q5VYJ5 2156 aa4.4□□□□□ -1.7
VPS45-207ENST00000477558 C5orf63A6NC05 138 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 ZSCAN5BA6NJL1 495 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 ANKRD65E5RJM6 399 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 M0R135 149 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 M0R233 179 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 ZNF593O00488 134 aaPredicted RBP4.39□□□□□ -1.71
VPS45-207ENST00000477558 TLX2O43763 284 aaPredicted RBP4.39□□□□□ -1.71
VPS45-207ENST00000477558 RP2O75695 350 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 CLPTM1O96005 669 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 SPARCP09486 303 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 CSF3P09919 207 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 SBK2P0C263 348 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 ZNF823P16415 610 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 GIFP27352 417 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 EFNA4P52798 201 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 NUDT6P53370 316 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 ATP5J2P56134 94 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 KRTAP10-11P60412 298 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 PSG7Q13046 419 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 APOFQ13790 326 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 LCN1P1Q5VSP4 162 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 DEGS2Q6QHC5 323 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 Q6ZR03 302 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 C9orf47Q6ZRZ4 202 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 ZBTB49Q6ZSB9 765 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 Q6ZSR3 168 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 MEPCEQ7L2J0 689 aaKnown RBP4.39□□□□□ -1.71
VPS45-207ENST00000477558 SHFQ7M4L6 423 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 SLC16A9Q7RTY1 509 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 DPY19L4Q7Z388 723 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 TBC1D26Q86UD7 250 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 ENTHD1Q8IYW4 607 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 TCEANCQ8N8B7 351 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 NEXN-AS1Q8NBZ9 246 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 OR1J1Q8NGS3 322 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 OR6N2Q8NGY6 317 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 RHOXF1Q8NHV9 184 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 C10orf105Q8TEF2 133 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 APH1BQ8WW43 257 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 STMN2Q93045 179 aa4.39□□□□□ -1.71
VPS45-207ENST00000477558 APOBEC3DQ96AK3 386 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms