RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	TRBV5-7	A0A0A0MS05	114 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	TRAV1-1	A0A0B4J248	108 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	FAM230A	A0A1W2PPH8	454 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	TSPAN11	A1L157	253 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520		A8MVM7	634 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520		C9JQL5	133 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520		E5RGE8	158 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	FAM227A	F5H4B4	570 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520		J3QR06	171 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	HMGN4	O00479	90 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	SOCS6	O14544	535 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	LDLRAD4	O15165	306 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	CCL16	O15467	120 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	ERAL1	O75616	437 aa	Known RBP	4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	OR2J2	O76002	312 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	STK17B	O94768	372 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	TOX4	O94842	621 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	SFT2D2	O95562	160 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	MBP	P02686	304 aa	Predicted RBP	4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	CAT	P04040	527 aa	Known RBP	4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	CSN2	P05814	226 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	ERCC1	P07992	297 aa	Predicted RBP	4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	CTXN2	P0C2S0	81 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	OR8U9	P0C7N5	309 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	EPHA8	P29322	1005 aa	Predicted RBP	4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	RPL12	P30050	165 aa	Known RBP	4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	CHRNB4	P30926	498 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	NAA10	P41227	235 aa	Predicted RBP	4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	P2RY1	P47900	373 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	CSNK1A1	P48729	337 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	CCR5	P51681	352 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	ZNF41	P51814	821 aa	Predicted RBP	4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	PDX1	P52945	283 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	PRKAG1	P54619	331 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	SLC37A1	P57057	533 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	OR12D2	P58182	307 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	TAS2R50	P59544	299 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	PFN3	P60673	137 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	LCN2	P80188	198 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	ZNF616	Q08AN1	781 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	TAF10	Q12962	218 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	IL15RA	Q13261	267 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	ZNF266	Q14584	549 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	ARL6IP1	Q15041	203 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	NSDHL	Q15738	373 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	AMZ1	Q400G9	498 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	KRTCAP3	Q53RY4	240 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	BEX5	Q5H9J7	111 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	ZNF506	Q5JVG8	444 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	SDHAF4	Q5VUM1	108 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	VWA1	Q6PCB0	445 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	TOMM20L	Q6UXN7	152 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	ESPNL	Q6ZVH7	1005 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520		Q7L0L9	218 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	ZNF429	Q86V71	674 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	C17orf64	Q86WR6	236 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	CATSPERD	Q86XM0	798 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	WDFY1	Q8IWB7	410 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	NRM	Q8IXM6	262 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	SLC35F2	Q8IXU6	374 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	NXPE1	Q8N323	547 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	OR2L13	Q8N349	312 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	GBGT1	Q8N5D6	347 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	C11orf42	Q8N5U0	333 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	C10orf53	Q8N6V4	93 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	ZNF433	Q8N7K0	673 aa	Predicted RBP	4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	EXD3	Q8N9H8	876 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	OR4K1	Q8NGD4	311 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	OR51L1	Q8NGJ5	315 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	OR51A2	Q8NGJ7	313 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	OR14C36	Q8NHC7	312 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	AQP3	Q92482	292 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	RGP1	Q92546	391 aa	Predicted RBP	4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	NEIL2	Q969S2	332 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	DDIT4L	Q96D03	193 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	RASD2	Q96D21	266 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	SLC35G5	Q96KT7	338 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	GPA33	Q99795	319 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	VPS25	Q9BRG1	176 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	GPR174	Q9BXC1	333 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	MRPL13	Q9BYD1	178 aa	Known RBP	4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	CHST6	Q9GZX3	395 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	OR52D1	Q9H346	318 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	ELL3	Q9HB65	397 aa	Predicted RBP	4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	BET1L	Q9NYM9	111 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	SLC23A2	Q9UGH3	650 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	CHRNA9	Q9UGM1	479 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	ZNF230	Q9UIE0	474 aa	Predicted RBP	4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	CD207	Q9UJ71	328 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	ZNF346	Q9UL40	294 aa	Known RBP	4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	ICAM5	Q9UMF0	924 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	NSG2	Q9Y328	171 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	OR51B4	Q9Y5P0	310 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	TMEM14A	Q9Y6G1	99 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	COLEC10	Q9Y6Z7	277 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	MYO10	Q9HD67	2058 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	ATG2A	Q2TAZ0	1938 aa		4.15	□□□□□ -1.75
PTCD3-212	ENST00000477520	DENND4C	Q5VZ89	1909 aa		4.15	□□□□□ -1.75

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