RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 HPSE2Q8WWQ2 592 aa10.34□□□□□ -0.75
CLCNKA-205ENST00000477360 PP6455Q8WZ26 134 aa10.34□□□□□ -0.75
CLCNKA-205ENST00000477360 PIGCQ92535 297 aa10.34□□□□□ -0.75
CLCNKA-205ENST00000477360 SGCDQ92629 289 aa10.34□□□□□ -0.75
CLCNKA-205ENST00000477360 RNF170Q96K19 258 aa10.34□□□□□ -0.75
CLCNKA-205ENST00000477360 FAM71F1Q96KD3 344 aaPredicted RBP10.34□□□□□ -0.75
CLCNKA-205ENST00000477360 C4orf36Q96KX1 117 aa10.34□□□□□ -0.75
CLCNKA-205ENST00000477360 OR8B2Q96RD0 313 aa10.34□□□□□ -0.75
CLCNKA-205ENST00000477360 TTTY10Q9BZA0 68 aa10.34□□□□□ -0.75
CLCNKA-205ENST00000477360 ZNF696Q9H7X3 374 aa10.34□□□□□ -0.75
CLCNKA-205ENST00000477360 UFSP2Q9NUQ7 469 aa10.34□□□□□ -0.75
CLCNKA-205ENST00000477360 RASL12Q9NYN1 266 aa10.34□□□□□ -0.75
CLCNKA-205ENST00000477360 ERVK-18Q9QC07 812 aa10.34□□□□□ -0.75
CLCNKA-205ENST00000477360 OR5V1Q9UGF6 321 aa10.34□□□□□ -0.75
CLCNKA-205ENST00000477360 GNG8Q9UK08 70 aa10.34□□□□□ -0.75
CLCNKA-205ENST00000477360 ERGIC3Q9Y282 383 aa10.34□□□□□ -0.75
CLCNKA-205ENST00000477360 PIGLQ9Y2B2 252 aa10.34□□□□□ -0.75
CLCNKA-205ENST00000477360 A0A0A6YYJ9 748 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 KIAA1324LA8MWY0 1029 aaPredicted RBP10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 MYL12BO14950 172 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 MAGEB4O15481 346 aaPredicted RBP10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 SYT7O43581 403 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 NOS1APO75052 506 aaPredicted RBP10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 ECDO95905 644 aaPredicted RBP10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 SERPINA3P01011 423 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 MT-ND2P03891 347 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 LIPFP07098 398 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 WNT4P56705 351 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 TAS2R43P59537 309 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 PAX2Q02962 417 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 MICBQ29980 383 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 TP53I3Q53FA7 332 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 WDR38Q5JTN6 314 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 DCAF12L2Q5VW00 463 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 FAM90A1Q86YD7 464 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 PRSS35Q8N3Z0 413 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 DNAAF1Q8NEP3 725 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 ZNF671Q8TAW3 534 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 DACT3Q96B18 629 aaPredicted RBP10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 MND1Q9BWT6 205 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 SSBP3Q9BWW4 388 aaPredicted RBP10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 OR51I2Q9H344 312 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 ISG20L2Q9H9L3 353 aaKnown RBP10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 PLEKHA1Q9HB21 404 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 ISYNA1Q9NPH2 558 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 ACOXLQ9NUZ1 547 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 BABAM2Q9NXR7 383 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 CLN8Q9UBY8 286 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 CLEC2DQ9UHP7 191 aa10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 LSM2Q9Y333 95 aaKnown RBP10.33□□□□□ -0.76
CLCNKA-205ENST00000477360 ANKRD61A6NGH8 418 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 TRIM64CA6NLI5 447 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 J3QLW9 94 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 CDIPTO14735 213 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 RPP14O95059 124 aaKnown RBP10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 ALX3O95076 343 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 CD1AP06126 327 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 FAHP16930 419 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 ZNF19P17023 458 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 EEF1B2P24534 225 aaKnown RBP10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 MPZP25189 248 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 PITPNBP48739 271 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 GBX2P52951 348 aaPredicted RBP10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 OR2G6Q5TZ20 316 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 ZNF773Q6PK81 442 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 ZNF841Q6ZN19 808 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 UTS2BQ765I0 119 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 SLC36A1Q7Z2H8 476 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 SVOPQ8N4V2 548 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 SCCPDHQ8NBX0 429 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 LRRC29Q8WV35 223 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 TMPRSS13Q9BYE2 586 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 CHST5Q9GZS9 411 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 NEK6Q9HC98 313 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 FRRS1LQ9P0K9 344 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 HHLA2Q9UM44 414 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 GTF2A1LQ9UNN4 478 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 POLDIP2Q9Y2S7 368 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 INSIG2Q9Y5U4 225 aa10.32□□□□□ -0.76
CLCNKA-205ENST00000477360 KIR2DS1A0A191URI9 304 aa10.31□□□□□ -0.76
CLCNKA-205ENST00000477360 LOC107986453A0A1B0GWG9 222 aa10.31□□□□□ -0.76
CLCNKA-205ENST00000477360 hCG_1807616A0A1W2PRN6 198 aa10.31□□□□□ -0.76
CLCNKA-205ENST00000477360 PQLC2LA1A4F0 135 aa10.31□□□□□ -0.76
CLCNKA-205ENST00000477360 TMEM212A6NML5 194 aa10.31□□□□□ -0.76
CLCNKA-205ENST00000477360 OR4C45A6NMZ5 311 aa10.31□□□□□ -0.76
CLCNKA-205ENST00000477360 ZNF732B4DXR9 585 aa10.31□□□□□ -0.76
CLCNKA-205ENST00000477360 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.31□□□□□ -0.76
CLCNKA-205ENST00000477360 P2RY10O00398 339 aa10.31□□□□□ -0.76
CLCNKA-205ENST00000477360 OGG1O15527 345 aa10.31□□□□□ -0.76
CLCNKA-205ENST00000477360 ADRA2CP18825 462 aa10.31□□□□□ -0.76
CLCNKA-205ENST00000477360 ZFP36P26651 326 aaKnown RBP10.31□□□□□ -0.76
CLCNKA-205ENST00000477360 GNB2P62879 340 aa10.31□□□□□ -0.76
CLCNKA-205ENST00000477360 PAX8Q06710 450 aa10.31□□□□□ -0.76
CLCNKA-205ENST00000477360 ALKBH1Q13686 389 aaKnown RBP10.31□□□□□ -0.76
CLCNKA-205ENST00000477360 SPHARQ15513 63 aa10.31□□□□□ -0.76
CLCNKA-205ENST00000477360 PLCXD3Q63HM9 321 aa10.31□□□□□ -0.76
CLCNKA-205ENST00000477360 WDR25Q64LD2 544 aaPredicted RBP10.31□□□□□ -0.76
CLCNKA-205ENST00000477360 FAHD2BQ6P2I3 314 aaPredicted RBP10.31□□□□□ -0.76
CLCNKA-205ENST00000477360 RPL22L1Q6P5R6 122 aaKnown RBP10.31□□□□□ -0.76
CLCNKA-205ENST00000477360 BTNL3Q6UXE8 466 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 180.1 ms