RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ABCB9Q9NP78 766 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 SAR1AQ9NR31 198 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 DNAJC27Q9NZQ0 273 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 PCDHGB5Q9Y5G0 923 aa9.1□□□□□ -0.95
BRCA1-213ENST00000476777 HUWE1Q7Z6Z7 4374 aaKnown RBP9.09□□□□□ -0.95
BRCA1-213ENST00000476777 RFPL4AA6NLU0 287 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 C17orf98A8MV24 154 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 FAM90A22PA8MWA6 464 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 RFPL4AL1F8VTS6 287 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 NME4O00746 187 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 CHRM2P08172 466 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 CCDC159P0C7I6 412 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 NCK1P16333 377 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 HSD11B1P28845 292 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 FMO3P31513 532 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 GSSP48637 474 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 GPM6AP51674 278 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 NKAPLQ5M9Q1 402 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 ZNF626Q68DY1 528 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 C10orf99Q6UWK7 81 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 MRPL41Q8IXM3 137 aaKnown RBP9.09□□□□□ -0.95
BRCA1-213ENST00000476777 OR11H6Q8NGC7 330 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 PIGCQ92535 297 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 FAM162AQ96A26 154 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 RCN3Q96D15 328 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 OR51I2Q9H344 312 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 BRD7Q9NPI1 651 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 MRGBPQ9NV56 204 aa9.09□□□□□ -0.95
BRCA1-213ENST00000476777 INTS9Q9NV88 658 aaKnown RBP9.09□□□□□ -0.95
BRCA1-213ENST00000476777 APOC1P02654 83 aa9.08□□□□□ -0.96
BRCA1-213ENST00000476777 GYPBP06028 91 aa9.08□□□□□ -0.96
BRCA1-213ENST00000476777 LMO1P25800 156 aa9.08□□□□□ -0.96
BRCA1-213ENST00000476777 KRT72Q14CN4 511 aa9.08□□□□□ -0.96
BRCA1-213ENST00000476777 KLHL22Q53GT1 634 aa9.08□□□□□ -0.96
BRCA1-213ENST00000476777 CASC10Q5T4H9 136 aa9.08□□□□□ -0.96
BRCA1-213ENST00000476777 ETV3LQ6ZN32 361 aa9.08□□□□□ -0.96
BRCA1-213ENST00000476777 ACP7Q6ZNF0 438 aa9.08□□□□□ -0.96
BRCA1-213ENST00000476777 CALHM1Q8IU99 346 aa9.08□□□□□ -0.96
BRCA1-213ENST00000476777 TIGD4Q8IY51 512 aa9.08□□□□□ -0.96
BRCA1-213ENST00000476777 ZDHHC23Q8IYP9 409 aa9.08□□□□□ -0.96
BRCA1-213ENST00000476777 ZNF561Q8N587 486 aa9.08□□□□□ -0.96
BRCA1-213ENST00000476777 FAM86B1Q8N7N1 296 aa9.08□□□□□ -0.96
BRCA1-213ENST00000476777 SLC37A3Q8NCC5 494 aa9.08□□□□□ -0.96
BRCA1-213ENST00000476777 OR4X2Q8NGF9 303 aa9.08□□□□□ -0.96
BRCA1-213ENST00000476777 OR2T27Q8NH04 317 aa9.08□□□□□ -0.96
BRCA1-213ENST00000476777 RNF133Q8WVZ7 376 aa9.08□□□□□ -0.96
BRCA1-213ENST00000476777 LYZL4Q96KX0 146 aa9.08□□□□□ -0.96
BRCA1-213ENST00000476777 ATP6V1G3Q96LB4 118 aa9.08□□□□□ -0.96
BRCA1-213ENST00000476777 EGLN3Q9H6Z9 239 aa9.08□□□□□ -0.96
BRCA1-213ENST00000476777 CSMD3Q7Z407 3707 aa9.07□□□□□ -0.96
BRCA1-213ENST00000476777 AZGP1P25311 298 aaKnown RBP9.07□□□□□ -0.96
BRCA1-213ENST00000476777 OPRL1P41146 370 aa9.07□□□□□ -0.96
BRCA1-213ENST00000476777 SMIM11AP58511 58 aa9.07□□□□□ -0.96
BRCA1-213ENST00000476777 GNG3P63215 75 aa9.07□□□□□ -0.96
BRCA1-213ENST00000476777 TSPAN31Q12999 210 aa9.07□□□□□ -0.96
BRCA1-213ENST00000476777 EIF2B1Q14232 305 aaKnown RBP9.07□□□□□ -0.96
BRCA1-213ENST00000476777 KHDC1LQ5JSQ8 128 aa9.07□□□□□ -0.96
BRCA1-213ENST00000476777 ZNF770Q6IQ21 691 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-213ENST00000476777 LCN8Q6JVE9 175 aa9.07□□□□□ -0.96
BRCA1-213ENST00000476777 KRT74Q7RTS7 529 aa9.07□□□□□ -0.96
BRCA1-213ENST00000476777 LINC00471Q8N535 108 aa9.07□□□□□ -0.96
BRCA1-213ENST00000476777 OR13D1Q8NGV5 346 aa9.07□□□□□ -0.96
BRCA1-213ENST00000476777 ZNF671Q8TAW3 534 aa9.07□□□□□ -0.96
BRCA1-213ENST00000476777 AQP3Q92482 292 aa9.07□□□□□ -0.96
BRCA1-213ENST00000476777 PGAM5Q96HS1 289 aa9.07□□□□□ -0.96
BRCA1-213ENST00000476777 AMELYQ99218 206 aa9.07□□□□□ -0.96
BRCA1-213ENST00000476777 ABHD6Q9BV23 337 aa9.07□□□□□ -0.96
BRCA1-213ENST00000476777 NMNAT2Q9BZQ4 307 aa9.07□□□□□ -0.96
BRCA1-213ENST00000476777 C1orf21Q9H246 121 aa9.07□□□□□ -0.96
BRCA1-213ENST00000476777 RASL12Q9NYN1 266 aa9.07□□□□□ -0.96
BRCA1-213ENST00000476777 LSM4Q9Y4Z0 139 aaKnown RBP9.07□□□□□ -0.96
BRCA1-213ENST00000476777 HILPDAQ9Y5L2 63 aa9.07□□□□□ -0.96
BRCA1-213ENST00000476777 CDH10Q9Y6N8 788 aa9.07□□□□□ -0.96
BRCA1-213ENST00000476777 KIAA2026Q5HYC2 2103 aa9.07□□□□□ -0.96
BRCA1-213ENST00000476777 ZNF732B4DXR9 585 aa9.06□□□□□ -0.96
BRCA1-213ENST00000476777 H0YHG0 523 aa9.06□□□□□ -0.96
BRCA1-213ENST00000476777 SLC1A7O00341 560 aa9.06□□□□□ -0.96
BRCA1-213ENST00000476777 ZFPL1O95159 310 aa9.06□□□□□ -0.96
BRCA1-213ENST00000476777 GADD45GO95257 159 aa9.06□□□□□ -0.96
BRCA1-213ENST00000476777 LPLP06858 475 aa9.06□□□□□ -0.96
BRCA1-213ENST00000476777 CLUP10909 449 aa9.06□□□□□ -0.96
BRCA1-213ENST00000476777 PIPP12273 146 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-213ENST00000476777 SPI1P17947 270 aa9.06□□□□□ -0.96
BRCA1-213ENST00000476777 PRDX2P32119 198 aa9.06□□□□□ -0.96
BRCA1-213ENST00000476777 IFNGR2P38484 337 aa9.06□□□□□ -0.96
BRCA1-213ENST00000476777 CEBPDP49716 269 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-213ENST00000476777 OR12D2P58182 307 aa9.06□□□□□ -0.96
BRCA1-213ENST00000476777 DGCR2P98153 550 aa9.06□□□□□ -0.96
BRCA1-213ENST00000476777 SLC34A1Q06495 639 aa9.06□□□□□ -0.96
BRCA1-213ENST00000476777 SMIM21Q3B7S5 101 aa9.06□□□□□ -0.96
BRCA1-213ENST00000476777 DMRTC1Q5HYR2 192 aa9.06□□□□□ -0.96
BRCA1-213ENST00000476777 CEP78Q5JTW2 689 aa9.06□□□□□ -0.96
BRCA1-213ENST00000476777 LINC01590Q5TEZ4 76 aa9.06□□□□□ -0.96
BRCA1-213ENST00000476777 C8orf82Q6P1X6 216 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-213ENST00000476777 OR52L1Q8NGH7 329 aa9.06□□□□□ -0.96
BRCA1-213ENST00000476777 OR6K6Q8NGW6 343 aa9.06□□□□□ -0.96
BRCA1-213ENST00000476777 GNPDA2Q8TDQ7 276 aa9.06□□□□□ -0.96
BRCA1-213ENST00000476777 HIST1H2AAQ96QV6 131 aa9.06□□□□□ -0.96
BRCA1-213ENST00000476777 KCTD14Q9BQ13 255 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-213ENST00000476777 MCRIP2Q9BUT9 160 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms