RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 ACAA1P09110 424 aaPredicted RBP6.03□□□□□ -1.44
SHQ1-207ENST00000475558 KITLGP21583 273 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 PTGFRP43088 359 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 MTCP1P56278 107 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 ZNF92Q03936 586 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 DCTN2Q13561 401 aaKnown RBP6.03□□□□□ -1.44
SHQ1-207ENST00000475558 KISS1Q15726 138 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 SNAI3Q3KNW1 292 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 C2orf76Q3KRA6 126 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 UBE2NLQ5JXB2 153 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 SHEQ5VZ18 495 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 PYHIN1Q6K0P9 492 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 RGS7BPQ6MZT1 257 aaPredicted RBP6.03□□□□□ -1.44
SHQ1-207ENST00000475558 C1orf229Q6ZS94 237 aaPredicted RBP6.03□□□□□ -1.44
SHQ1-207ENST00000475558 OR2W3Q7Z3T1 314 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 ANGPTL5Q86XS5 388 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 MKXQ8IYA7 352 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 ZDHHC23Q8IYP9 409 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 PXT1Q8NFP0 134 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 OR51A4Q8NGJ6 313 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 OR1J1Q8NGS3 322 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 OR13C5Q8NGS8 318 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 OR13G1Q8NGZ3 307 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 PIGCQ92535 297 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 SLC7A6Q92536 515 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 HTRA1Q92743 480 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 ERGIC1Q969X5 290 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 FAM3DQ96BQ1 224 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 CMBLQ96DG6 245 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 ADAT3Q96EY9 351 aaPredicted RBP6.03□□□□□ -1.44
SHQ1-207ENST00000475558 LYZL4Q96KX0 146 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 GPER1Q99527 375 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 MDFIQ99750 246 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 URM1Q9BTM9 101 aaKnown RBP6.03□□□□□ -1.44
SHQ1-207ENST00000475558 CCDC32Q9BV29 185 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 METTL9Q9H1A3 318 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 PPIL3Q9H2H8 161 aaKnown RBP6.03□□□□□ -1.44
SHQ1-207ENST00000475558 PLK3Q9H4B4 646 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 CXorf56Q9H5V9 222 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 RNF167Q9H6Y7 350 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 SMURF1Q9HCE7 757 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 C14orf119Q9NWQ9 140 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 TAS2R4Q9NYW5 299 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 ARHGAP21Q5T5U3 1957 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 EML6Q6ZMW3 1958 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 ALPK2Q86TB3 2170 aa6.03□□□□□ -1.44
SHQ1-207ENST00000475558 ARID1AO14497 2285 aa6.02□□□□□ -1.44
SHQ1-207ENST00000475558 VPS13CQ709C8 3753 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 HIVEP2P31629 2446 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 IGHV2OR16-5A0A0B4J2B6 119 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 IGHV1-18A0A0C4DH31 117 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 TUBAL3A6NHL2 446 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 TMEM210A6NLX4 147 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 IQCF6A8MYZ5 107 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 FAM25AB3EWG3 89 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 FAM25CB3EWG5 89 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 FAM25GB3EWG6 89 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 M0R1B8 84 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 SULT1C2O00338 296 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 CTDSP2O14595 271 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 AKR7A2O43488 359 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 KDM4BO94953 1096 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 IGHV3-13P01766 116 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 CLEC2LP0C7M8 214 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 CECR9P0C854 216 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 GSTT2BP0CG30 244 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 BMP4P12644 408 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 ZNF250P15622 560 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 AZGP1P25311 298 aaKnown RBP6.02□□□□□ -1.45
SHQ1-207ENST00000475558 CD40P25942 277 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 THBS2P35442 1172 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 MNDAP41218 407 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 PITPNBP48739 271 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 DEFA1P59665 94 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 DEFA3P59666 94 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 GNG3P63215 75 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 NKX6-1P78426 367 aaPredicted RBP6.02□□□□□ -1.45
SHQ1-207ENST00000475558 SNTB1Q13884 538 aaKnown RBP6.02□□□□□ -1.45
SHQ1-207ENST00000475558 INSL4Q14641 139 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 GFOD2Q3B7J2 385 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 BEX5Q5H9J7 111 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 FAM27D1Q5T7N8 215 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 FAM166AQ6J272 317 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 ASCL4Q6XD76 172 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 MOB3CQ70IA8 216 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 CCDC190Q86UF4 302 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 LSRQ86X29 649 aaPredicted RBP6.02□□□□□ -1.45
SHQ1-207ENST00000475558 PRIMA1Q86XR5 153 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 Q8IYB0 196 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 JAGN1Q8N5M9 183 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 CELF2-AS1Q8N7Q2 184 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 RELL2Q8NC24 303 aaPredicted RBP6.02□□□□□ -1.45
SHQ1-207ENST00000475558 OR8G5Q8NG78 346 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 OR51A2Q8NGJ7 313 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 OR13C9Q8NGT0 318 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 OR10AC1Q8NH08 325 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 SYNPRQ8TBG9 265 aa6.02□□□□□ -1.45
SHQ1-207ENST00000475558 TRMT10AQ8TBZ6 339 aaKnown RBP6.02□□□□□ -1.45
SHQ1-207ENST00000475558 KLF14Q8TD94 323 aaPredicted RBP6.02□□□□□ -1.45
SHQ1-207ENST00000475558 MARS2Q96GW9 593 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms