RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 PLBD1Q6P4A8 553 aa20.24■□□□□ 0.83
TMEM54-205ENST00000475208 SDSLQ96GA7 329 aa20.24■□□□□ 0.83
TMEM54-205ENST00000475208 NIPAL2Q9H841 368 aa20.24■□□□□ 0.83
TMEM54-205ENST00000475208 LRP12Q9Y561 859 aa20.24■□□□□ 0.83
TMEM54-205ENST00000475208 VSIG10L2P0DP72 767 aa20.23■□□□□ 0.83
TMEM54-205ENST00000475208 MAP2K3P46734 347 aa20.23■□□□□ 0.83
TMEM54-205ENST00000475208 GYS2P54840 703 aa20.23■□□□□ 0.83
TMEM54-205ENST00000475208 CEACAM21Q3KPI0 293 aa20.23■□□□□ 0.83
TMEM54-205ENST00000475208 Q6ZPA2 131 aa20.23■□□□□ 0.83
TMEM54-205ENST00000475208 OR5K1Q8NHB7 308 aa20.23■□□□□ 0.83
TMEM54-205ENST00000475208 ZNF671Q8TAW3 534 aa20.23■□□□□ 0.83
TMEM54-205ENST00000475208 AQP3Q92482 292 aa20.23■□□□□ 0.83
TMEM54-205ENST00000475208 FEVQ99581 238 aa20.23■□□□□ 0.83
TMEM54-205ENST00000475208 NPFFR1Q9GZQ6 430 aa20.23■□□□□ 0.83
TMEM54-205ENST00000475208 CHST1O43916 411 aa20.22■□□□□ 0.83
TMEM54-205ENST00000475208 FAM98BQ52LJ0 330 aaKnown RBP20.22■□□□□ 0.83
TMEM54-205ENST00000475208 DMRTC1Q5HYR2 192 aa20.22■□□□□ 0.83
TMEM54-205ENST00000475208 LCN8Q6JVE9 175 aa20.22■□□□□ 0.83
TMEM54-205ENST00000475208 KRT74Q7RTS7 529 aa20.22■□□□□ 0.83
TMEM54-205ENST00000475208 THAP5Q7Z6K1 395 aa20.22■□□□□ 0.83
TMEM54-205ENST00000475208 PIN1P1O15428 100 aa20.21■□□□□ 0.83
TMEM54-205ENST00000475208 BMXP51813 675 aa20.21■□□□□ 0.83
TMEM54-205ENST00000475208 HAGHLQ6PII5 290 aaPredicted RBP20.21■□□□□ 0.83
TMEM54-205ENST00000475208 LIAT1Q6ZQX7 453 aa20.21■□□□□ 0.83
TMEM54-205ENST00000475208 KRT77Q7Z794 578 aa20.21■□□□□ 0.83
TMEM54-205ENST00000475208 DHFR2Q86XF0 187 aa20.21■□□□□ 0.83
TMEM54-205ENST00000475208 GIPC3Q8TF64 312 aa20.21■□□□□ 0.83
TMEM54-205ENST00000475208 NKX3-1Q99801 234 aaPredicted RBP20.21■□□□□ 0.83
TMEM54-205ENST00000475208 MUC13Q9H3R2 512 aa20.21■□□□□ 0.83
TMEM54-205ENST00000475208 HEXA-AS1Q9H8Q6 139 aa20.21■□□□□ 0.83
TMEM54-205ENST00000475208 ZNF281Q9Y2X9 895 aa20.21■□□□□ 0.83
TMEM54-205ENST00000475208 MEGF11A6BM72 1044 aa20.2■□□□□ 0.82
TMEM54-205ENST00000475208 OR5B21A6NL26 309 aa20.2■□□□□ 0.82
TMEM54-205ENST00000475208 RFPL4AA6NLU0 287 aa20.2■□□□□ 0.82
TMEM54-205ENST00000475208 RFPL4AL1F8VTS6 287 aa20.2■□□□□ 0.82
TMEM54-205ENST00000475208 PRODHO43272 600 aa20.2■□□□□ 0.82
TMEM54-205ENST00000475208 MTRF1O75570 445 aaKnown RBP20.2■□□□□ 0.82
TMEM54-205ENST00000475208 COX7A1P24310 79 aa20.2■□□□□ 0.82
TMEM54-205ENST00000475208 RPL31P62899 125 aaKnown RBP20.2■□□□□ 0.82
TMEM54-205ENST00000475208 GNGT1P63211 74 aa20.2■□□□□ 0.82
TMEM54-205ENST00000475208 GINS1Q14691 196 aa20.2■□□□□ 0.82
TMEM54-205ENST00000475208 ACP7Q6ZNF0 438 aa20.2■□□□□ 0.82
TMEM54-205ENST00000475208 REC114Q7Z4M0 266 aa20.2■□□□□ 0.82
TMEM54-205ENST00000475208 PIGWQ7Z7B1 504 aa20.2■□□□□ 0.82
TMEM54-205ENST00000475208 COMMD2Q86X83 199 aa20.2■□□□□ 0.82
TMEM54-205ENST00000475208 LYG1Q8N1E2 194 aa20.2■□□□□ 0.82
TMEM54-205ENST00000475208 OR5A2Q8NGI9 324 aa20.2■□□□□ 0.82
TMEM54-205ENST00000475208 FAM206AQ9NX38 181 aa20.2■□□□□ 0.82
TMEM54-205ENST00000475208 RASL12Q9NYN1 266 aa20.2■□□□□ 0.82
TMEM54-205ENST00000475208 LAMP5Q9UJQ1 280 aa20.2■□□□□ 0.82
TMEM54-205ENST00000475208 A0A0U1RQV5 110 aa20.19■□□□□ 0.82
TMEM54-205ENST00000475208 A0A1W2PPH5 198 aa20.19■□□□□ 0.82
TMEM54-205ENST00000475208 ALOX5APP20292 161 aa20.19■□□□□ 0.82
TMEM54-205ENST00000475208 LGALS4P56470 323 aa20.19■□□□□ 0.82
TMEM54-205ENST00000475208 SMIM21Q3B7S5 101 aa20.19■□□□□ 0.82
TMEM54-205ENST00000475208 PLCXD3Q63HM9 321 aa20.19■□□□□ 0.82
TMEM54-205ENST00000475208 TMEM200BQ69YZ2 307 aa20.19■□□□□ 0.82
TMEM54-205ENST00000475208 MOB3CQ70IA8 216 aa20.19■□□□□ 0.82
TMEM54-205ENST00000475208 TRPM8Q7Z2W7 1104 aa20.19■□□□□ 0.82
TMEM54-205ENST00000475208 CPOQ8IVL8 374 aa20.19■□□□□ 0.82
TMEM54-205ENST00000475208 C11orf42Q8N5U0 333 aa20.19■□□□□ 0.82
TMEM54-205ENST00000475208 CD177Q8N6Q3 437 aa20.19■□□□□ 0.82
TMEM54-205ENST00000475208 DTX3Q8N9I9 347 aa20.19■□□□□ 0.82
TMEM54-205ENST00000475208 BBS1Q8NFJ9 593 aa20.19■□□□□ 0.82
TMEM54-205ENST00000475208 PIFOQ8TCI5 191 aa20.19■□□□□ 0.82
TMEM54-205ENST00000475208 ZNF488Q96MN9 340 aa20.19■□□□□ 0.82
TMEM54-205ENST00000475208 ARL2BPQ9Y2Y0 163 aa20.19■□□□□ 0.82
TMEM54-205ENST00000475208 ARRDC5A6NEK1 342 aa20.18■□□□□ 0.82
TMEM54-205ENST00000475208 CCL3L1P16619 93 aa20.18■□□□□ 0.82
TMEM54-205ENST00000475208 RPS7P62081 194 aaKnown RBP20.18■□□□□ 0.82
TMEM54-205ENST00000475208 RIPPLY1Q0D2K3 151 aa20.18■□□□□ 0.82
TMEM54-205ENST00000475208 GK3PQ14409 553 aa20.18■□□□□ 0.82
TMEM54-205ENST00000475208 NSUN5P1Q3KNT7 163 aa20.18■□□□□ 0.82
TMEM54-205ENST00000475208 SLC35D3Q5M8T2 416 aa20.18■□□□□ 0.82
TMEM54-205ENST00000475208 POC1AQ8NBT0 407 aa20.18■□□□□ 0.82
TMEM54-205ENST00000475208 PPP1R14AQ96A00 147 aa20.18■□□□□ 0.82
TMEM54-205ENST00000475208 ZNF702PQ9H963 129 aa20.18■□□□□ 0.82
TMEM54-205ENST00000475208 USE1Q9NZ43 259 aa20.18■□□□□ 0.82
TMEM54-205ENST00000475208 TMEM269A0A1B0GVZ9 245 aa20.17■□□□□ 0.82
TMEM54-205ENST00000475208 ACOD1A6NK06 481 aa20.17■□□□□ 0.82
TMEM54-205ENST00000475208 PSMD9O00233 223 aa20.17■□□□□ 0.82
TMEM54-205ENST00000475208 SLC1A7O00341 560 aa20.17■□□□□ 0.82
TMEM54-205ENST00000475208 FBXO24O75426 580 aa20.17■□□□□ 0.82
TMEM54-205ENST00000475208 DCTN3O75935 186 aa20.17■□□□□ 0.82
TMEM54-205ENST00000475208 ALX3O95076 343 aa20.17■□□□□ 0.82
TMEM54-205ENST00000475208 ATP6V1B1P15313 513 aa20.17■□□□□ 0.82
TMEM54-205ENST00000475208 FAHP16930 419 aa20.17■□□□□ 0.82
TMEM54-205ENST00000475208 CEBPDP49716 269 aaPredicted RBP20.17■□□□□ 0.82
TMEM54-205ENST00000475208 HCCSP53701 268 aa20.17■□□□□ 0.82
TMEM54-205ENST00000475208 ERVFRD-1P60508 538 aa20.17■□□□□ 0.82
TMEM54-205ENST00000475208 MS4A2Q01362 244 aa20.17■□□□□ 0.82
TMEM54-205ENST00000475208 ZNF561Q8N587 486 aa20.17■□□□□ 0.82
TMEM54-205ENST00000475208 OR4M1Q8NGD0 313 aa20.17■□□□□ 0.82
TMEM54-205ENST00000475208 GPR84Q9NQS5 396 aa20.17■□□□□ 0.82
TMEM54-205ENST00000475208 hCG_1809904A0A1W2PP81 198 aa20.16■□□□□ 0.82
TMEM54-205ENST00000475208 A0A1W2PPE2 198 aa20.16■□□□□ 0.82
TMEM54-205ENST00000475208 A0A1W2PR64 198 aa20.16■□□□□ 0.82
TMEM54-205ENST00000475208 A0A1W2PRV1 198 aa20.16■□□□□ 0.82
TMEM54-205ENST00000475208 GSC2O15499 205 aa20.16■□□□□ 0.82
TMEM54-205ENST00000475208 CST1P01037 141 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms